Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-23 05:27:56 (72380): Detected: vboxwrapper 26206
2025-02-23 05:27:56 (72380): Detected: BOINC client v8.0.2
2025-02-23 05:27:58 (72380): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-02-23 05:27:58 (72380): Successfully copied 'init_data.xml' to the shared directory.
2025-02-23 05:27:58 (72380): Create VM. (boinc_cba08725cbc23439, slot#2)
2025-02-23 05:27:59 (72380): Setting Memory Size for VM. (8000MB)
2025-02-23 05:27:59 (72380): Setting CPU Count for VM. (5)
2025-02-23 05:28:00 (72380): Setting Chipset Options for VM.
2025-02-23 05:28:00 (72380): Setting Graphics Controller Options for VM.
2025-02-23 05:28:00 (72380): Setting Boot Options for VM.
2025-02-23 05:28:01 (72380): Setting Network Configuration for NAT.
2025-02-23 05:28:01 (72380): Enabling VM Network Access.
2025-02-23 05:28:01 (72380): Disabling USB Support for VM.
2025-02-23 05:28:01 (72380): Disabling COM Port Support for VM.
2025-02-23 05:28:02 (72380): Disabling LPT Port Support for VM.
2025-02-23 05:28:02 (72380): Disabling Audio Support for VM.
2025-02-23 05:28:02 (72380): Disabling Clipboard Support for VM.
2025-02-23 05:28:03 (72380): Disabling Drag and Drop Support for VM.
2025-02-23 05:28:03 (72380): Adding storage controller(s) to VM.
2025-02-23 05:28:03 (72380): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-23 05:28:06 (72380): Adding VirtualBox Guest Additions to VM.
2025-02-23 05:28:06 (72380): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-23 05:28:06 (72380): forwarding host port 55565 to guest port 80
2025-02-23 05:28:07 (72380): Enabling remote desktop for VM.
2025-02-23 05:28:07 (72380): Enabling shared directory for VM.
2025-02-23 05:28:08 (72380): Starting VM using VBoxManage interface. (boinc_cba08725cbc23439, slot#2)
2025-02-23 05:28:15 (72380): Successfully started VM. (PID = '53112')
2025-02-23 05:28:15 (72380): Reporting VM Process ID to BOINC.
2025-02-23 05:28:15 (72380): Guest Log: BIOS: VirtualBox 7.0.14
2025-02-23 05:28:15 (72380): Guest Log: CPUID EDX: 0x178bfbff
2025-02-23 05:28:15 (72380): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-23 05:28:15 (72380): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-23 05:28:15 (72380): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-23 05:28:15 (72380): Detected: Web Application Enabled (http://localhost:55565)
2025-02-23 05:28:15 (72380): Detected: Remote Desktop Enabled (localhost:55566)
2025-02-23 05:28:15 (72380): Preference change detected
2025-02-23 05:28:15 (72380): Setting CPU throttle for VM. (100%)
2025-02-23 05:28:16 (72380): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-23 05:28:18 (72380): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-23 05:28:18 (72380): Guest Log: BIOS: Booting from Hard Disk...
2025-02-23 05:28:21 (72380): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-23 05:28:21 (72380): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-23 05:28:21 (72380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-23 05:28:31 (72380): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-23 05:28:31 (72380): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-23 05:29:12 (72380): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-23 05:29:12 (72380): Guest Log: 00:00:00.000201 main     Log opened 2025-02-23T05:29:09.148491000Z
2025-02-23 05:29:12 (72380): Guest Log: 00:00:00.000356 main     OS Product: Linux
2025-02-23 05:29:12 (72380): Guest Log: 00:00:00.000393 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-23 05:29:12 (72380): Guest Log: 00:00:00.000415 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-23 05:29:12 (72380): Guest Log: 00:00:00.000436 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-23 05:29:12 (72380): Guest Log: 00:00:00.000436 main     Process ID: 1452
2025-02-23 05:29:12 (72380): Guest Log: 00:00:00.000437 main     Package type: LINUX_64BITS_GENERIC
2025-02-23 05:29:12 (72380): Guest Log: 00:00:00.001069 main     5.2.32 r132073 started. Verbose level = 0
2025-02-23 05:29:12 (72380): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-23 05:29:12 (72380): Guest Log: [INFO] Mounting shared directory
2025-02-23 05:29:12 (72380): Guest Log: [INFO] Checking for init_data.xml
2025-02-23 05:29:17 (72380): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-23 05:29:17 (72380): Guest Log: [INFO] Detected branch: prod
2025-02-23 05:29:18 (72380): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-23 05:29:18 (72380): Guest Log: Copying input files
2025-02-23 05:29:22 (72380): Guest Log: 00:00:10.003167 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 822 229 000ns (GuestNow=1 740 317 360 972 818 000 ns GuestLast=1 740 288 549 150 589 000 ns fSetTimeLastLoop=true )
2025-02-23 05:29:24 (72380): Guest Log: Copied input files into RunAtlas.
2025-02-23 05:29:24 (72380): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-23 05:29:24 (72380): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-23 05:29:24 (72380): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-23 05:29:24 (72380): Guest Log: Further information can be found at the LHC@home message board.
2025-02-23 05:29:34 (72380): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-23 05:29:34 (72380): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-23 05:29:34 (72380): Guest Log: 2.6.3.0 1730 0 32040 142977 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-23 05:29:37 (72380): Guest Log: copied the webapp to /var/www
2025-02-23 05:29:37 (72380): Guest Log: ATHENA_PROC_NUMBER=5
2025-02-23 05:29:37 (72380): Guest Log: ATHENA_CORE_NUMBER=5
2025-02-23 05:29:39 (72380): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-23 05:29:39 (72380): Guest Log:  *** Starting ATLAS job. (PandaID=6522371181 taskID=43205075) ***
2025-02-23 07:08:42 (72380): Status Report: Elapsed Time: '6000.000000'
2025-02-23 07:08:42 (72380): Status Report: CPU Time: '20335.015625'
2025-02-23 07:58:35 (72380): VM state change detected. (old = 'running', new = 'paused')
2025-02-23 08:39:19 (72380): Guest Log: 02:29:23.246030 timesync vgsvcTimeSyncWorker: Radical host time change: 2 454 347 000 000ns (HostNow=1 740 328 758 464 000 000 ns HostLast=1 740 326 304 117 000 000 ns)
2025-02-23 08:39:19 (72380): VM state change detected. (old = 'paused', new = 'running')
2025-02-23 08:39:29 (72380): Guest Log: 02:29:33.249162 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 454 252 076 000ns (GuestNow=1 740 328 768 467 238 000 ns GuestLast=1 740 326 314 215 162 000 ns fSetTimeLastLoop=true )
2025-02-23 09:10:01 (72380): VM state change detected. (old = 'running', new = 'paused')
2025-02-23 09:28:53 (72380): VM state change detected. (old = 'paused', new = 'running')
2025-02-23 09:48:56 (72380): Status Report: Elapsed Time: '12000.000000'
2025-02-23 09:48:56 (72380): Status Report: CPU Time: '50152.437500'
2025-02-23 09:59:46 (72380): VM state change detected. (old = 'running', new = 'paused')
2025-02-23 10:14:38 (72380): VM state change detected. (old = 'paused', new = 'running')
2025-02-23 10:14:51 (72380): Guest Log: 03:31:14.121173 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 031 622 746 000ns (GuestNow=1 740 334 490 955 995 000 ns GuestLast=1 740 332 459 333 249 000 ns fSetTimeLastLoop=true )
2025-02-23 10:47:27 (72380): Guest Log:  *** Job finished ***
2025-02-23 10:47:27 (72380): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:14,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:15,507 | INFO     | [job] queue monitor thread has finished
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:17,974 | INFO     | [data] queue_monitor thread has finished
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:19,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140659732731712)>', '<ExcThread(monitor, started 140659163916032)>']
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:19,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:19,835 | INFO     | [monitor] control thread has ended
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,375 | INFO     | all workflow threads have been joined
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,375 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,376 | INFO     | traces error code: 0
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,376 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,470 [wrapper] ==== pilot stdout END ====
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,475 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,480 [wrapper] pilotpid: 6110
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,485 [wrapper] Pilot exit status: 0
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,592 [wrapper] pandaids: 6522371181
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,620 [wrapper] cleanup supervisor_pilot 18152 6111
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,625 [wrapper] Test setup, not cleaning
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,633 [wrapper] apfmon messages muted
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,637 [wrapper] ==== wrapper stdout END ====
2025-02-23 10:47:27 (72380): Guest Log: 2025-02-23 18:47:24,642 [wrapper] ==== wrapper stderr END ====
2025-02-23 10:47:27 (72380): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 10:47:27 (72380): Guest Log:     "exeErrorCode": 0,
2025-02-23 10:47:27 (72380): Guest Log:     "exeErrorDiag": "",
2025-02-23 10:47:27 (72380): Guest Log:     "pilotErrorCode": 0,
2025-02-23 10:47:27 (72380): Guest Log:     "pilotErrorDiag": "",
2025-02-23 10:47:27 (72380): Guest Log:  *** Listing of results directory ***
2025-02-23 10:47:27 (72380): Guest Log: total 330384
2025-02-23 10:47:27 (72380): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 21 15:37 pilot3.tar.gz
2025-02-23 10:47:27 (72380): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 21 15:51 runpilot2-wrapper.sh
2025-02-23 10:47:27 (72380): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 21 15:51 queuedata.json
2025-02-23 10:47:27 (72380): Guest Log: -rwxr-xr-x. 1 atlas atlas      9393 Feb 23 13:29 init_data.xml
2025-02-23 10:47:27 (72380): Guest Log: -rwxr-xr-x. 1 atlas atlas    503553 Feb 23 13:29 input.tar.gz
2025-02-23 10:47:27 (72380): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 23 13:29 start_atlas.sh
2025-02-23 10:47:27 (72380): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 23 13:29 EVNT.43092757._000367.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 10:47:27 (72380): Guest Log: -rw-r--r--. 1 atlas atlas      2552 Feb 23 13:29 pandaJob.out
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas       424 Feb 23 13:31 setup.sh.local
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas    987736 Feb 23 13:34 agis_schedconf.cvmfs.json
2025-02-23 10:47:27 (72380): Guest Log: drwx------. 4 atlas atlas      4096 Feb 23 13:34 pilot3
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas 331309946 Feb 23 18:46 HITS.43205075._057638.pool.root.1
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas      1051 Feb 23 18:46 memory_monitor_summary.json
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 23 18:46 agis_ddmendpoints.agis.ALL.json
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas    343720 Feb 23 18:46 log.43205075._057638.job.log.tgz.1
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas        97 Feb 23 18:46 pilot_heartbeat.json
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas      7764 Feb 23 18:47 heartbeat.json
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 23 18:47 pilotlog.txt
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas   1290289 Feb 23 18:47 log.43205075._057638.job.log.1
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas       357 Feb 23 18:47 output.list
2025-02-23 10:47:27 (72380): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 23 18:47 runtime_log
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas   1648640 Feb 23 18:47 result.tar.gz
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas       659 Feb 23 18:47 xHcMDmPUk56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmlZsKDma3dRvm.diag
2025-02-23 10:47:27 (72380): Guest Log: -rw-r--r--. 1 atlas atlas     10945 Feb 23 18:47 runtime_log.err
2025-02-23 10:47:27 (72380): Guest Log: Looking for outputfile HITS.43205075._057638.pool.root.1
2025-02-23 10:47:27 (72380): Guest Log: HITS file was successfully produced
2025-02-23 10:47:27 (72380): Guest Log: -rw-------. 1 atlas atlas 331309946 Feb 23 18:46 /home/atlas/RunAtlas/HITS.43205075._057638.pool.root.1
2025-02-23 10:47:28 (72380): Guest Log: Successfully finished the ATLAS job!
2025-02-23 10:47:28 (72380): Guest Log: Copying the results back to the shared directory!
2025-02-23 10:47:29 (72380): Guest Log:  *** Contents of shared directory: ***
2025-02-23 10:47:29 (72380): Guest Log: total 663640
2025-02-23 10:47:29 (72380): Guest Log: -rwxrwxrwx. 1 root root 346066944 Feb 23 13:27 ATLAS.root_0
2025-02-23 10:47:29 (72380): Guest Log: -rwxrwxrwx. 1 root root 331309946 Feb 23 18:47 HITS.pool.root.1
2025-02-23 10:47:29 (72380): Guest Log: -rwxrwxrwx. 1 root root      9393 Feb 23 13:27 init_data.xml
2025-02-23 10:47:29 (72380): Guest Log: -rwxrwxrwx. 1 root root    503553 Feb 21 19:37 input.tar.gz
2025-02-23 10:47:29 (72380): Guest Log: -rwxrwxrwx. 1 root root   1648640 Feb 23 18:47 result.tar.gz
2025-02-23 10:47:29 (72380): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 21 19:38 start_atlas.sh
2025-02-23 10:47:29 (72380): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 10:47:29 (72380): VM Completion File Detected.
2025-02-23 10:47:29 (72380): Powering off VM.
2025-02-23 10:47:31 (72380): Successfully stopped VM.
2025-02-23 10:47:31 (72380): Deregistering VM. (boinc_cba08725cbc23439, slot#2)
2025-02-23 10:47:31 (72380): Removing network bandwidth throttle group from VM.
2025-02-23 10:47:31 (72380): Removing VM from VirtualBox.
10:47:36 (72380): called boinc_finish(0)

</stderr_txt>
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