Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:20:34 (820504): wrapper (7.7.26015): starting
15:20:34 (820504): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 15:20:34] Arguments: --nthreads 4
[2025-02-24 15:20:34] Threads: 4
[2025-02-24 15:20:34] Checking for CVMFS
[2025-02-24 15:20:34] No cvmfs_config command found, will try listing directly
[2025-02-24 15:20:34] CVMFS is ok
[2025-02-24 15:20:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 15:20:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 15:20:34] Further information can be found at the LHC@home message board.
[2025-02-24 15:20:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 15:20:34] Checking for apptainer binary...
[2025-02-24 15:20:34] which: no apptainer in ((null))
[2025-02-24 15:20:34] apptainer is not installed, using version from CVMFS
[2025-02-24 15:20:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 15:20:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-02-24 15:20:34] apptainer works
[2025-02-24 15:20:34] Set ATHENA_PROC_NUMBER=4
[2025-02-24 15:20:34] Set ATHENA_CORE_NUMBER=4
[2025-02-24 15:20:34] Starting ATLAS job with PandaID=6522148374
[2025-02-24 15:20:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 21:27:08]  *** The last 200 lines of the pilot log: ***
[2025-02-24 21:27:08] 2025-02-24 20:22:52,688 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-24 21:27:08] 2025-02-24 20:22:52,688 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-24 21:27:08] 2025-02-24 20:22:52,695 | INFO     | fitting pss+swap vs Time
[2025-02-24 21:27:08] 2025-02-24 20:22:52,695 | INFO     | model: linear, x: [1740406882.0, 1740406943.0, 1740407004.0, 1740407065.0, 1740407126.0, 1740407187.0, 1740407248.0, 1740407309.0, 1740407370.0, 1740407431.0, 1740
[2025-02-24 21:27:08] 2025-02-24 20:22:52,698 | INFO     | sum of square deviations: 13990234405.0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,701 | INFO     | sum of deviations: 143382248321.00003
[2025-02-24 21:27:08] 2025-02-24 20:22:52,701 | INFO     | mean x: 1740417709.5
[2025-02-24 21:27:08] 2025-02-24 20:22:52,701 | INFO     | mean y: 2336869.393258427
[2025-02-24 21:27:08] 2025-02-24 20:22:52,701 | INFO     | -- intersect: -17834748413.224285
[2025-02-24 21:27:08] 2025-02-24 20:22:52,702 | INFO     | intersect: -17834748413.224285
[2025-02-24 21:27:08] 2025-02-24 20:22:52,702 | INFO     | chi2: 5.180760020285729
[2025-02-24 21:27:08] 2025-02-24 20:22:52,702 | INFO     | model: linear, x: [1740406882.0, 1740406943.0, 1740407004.0, 1740407065.0, 1740407126.0, 1740407187.0, 1740407248.0, 1740407309.0, 1740407370.0, 1740407431.0, 1740
[2025-02-24 21:27:08] 2025-02-24 20:22:52,703 | INFO     | sum of square deviations: 13408995600.0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,706 | INFO     | sum of deviations: 164235513365.0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,706 | INFO     | mean x: 1740417557.0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,706 | INFO     | mean y: 2342271.809116809
[2025-02-24 21:27:08] 2025-02-24 20:22:52,706 | INFO     | -- intersect: -21314569111.423355
[2025-02-24 21:27:08] 2025-02-24 20:22:52,706 | INFO     | intersect: -21314569111.423355
[2025-02-24 21:27:08] 2025-02-24 20:22:52,707 | INFO     | chi2: 4.385393075932813
[2025-02-24 21:27:08] 2025-02-24 20:22:52,707 | INFO     | current chi2=4.385393075932813 (change=15.352321690998732 %)
[2025-02-24 21:27:08] 2025-02-24 20:22:52,707 | INFO     | right removable region: 350
[2025-02-24 21:27:08] 2025-02-24 20:22:52,708 | INFO     | model: linear, x: [1740407187.0, 1740407248.0, 1740407309.0, 1740407370.0, 1740407431.0, 1740407492.0, 1740407553.0, 1740407614.0, 1740407675.0, 1740407736.0, 1740
[2025-02-24 21:27:08] 2025-02-24 20:22:52,708 | INFO     | sum of square deviations: 13408995600.0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,711 | INFO     | sum of deviations: 55880648138.99999
[2025-02-24 21:27:08] 2025-02-24 20:22:52,711 | INFO     | mean x: 1740417862.0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,711 | INFO     | mean y: 2359791.321937322
[2025-02-24 21:27:08] 2025-02-24 20:22:52,711 | INFO     | -- intersect: -7250657590.625197
[2025-02-24 21:27:08] 2025-02-24 20:22:52,711 | INFO     | intersect: -7250657590.625197
[2025-02-24 21:27:08] 2025-02-24 20:22:52,712 | INFO     | chi2: 2.5559526055916075
[2025-02-24 21:27:08] 2025-02-24 20:22:52,712 | INFO     | current chi2=2.5559526055916075 (change=50.664524209120934 %)
[2025-02-24 21:27:08] 2025-02-24 20:22:52,712 | INFO     | model: linear, x: [1740407492.0, 1740407553.0, 1740407614.0, 1740407675.0, 1740407736.0, 1740407797.0, 1740407858.0, 1740407919.0, 1740407980.0, 1740408041.0, 1740
[2025-02-24 21:27:08] 2025-02-24 20:22:52,714 | INFO     | sum of square deviations: 12844082682.5
[2025-02-24 21:27:08] 2025-02-24 20:22:52,717 | INFO     | sum of deviations: -14650799775.500004
[2025-02-24 21:27:08] 2025-02-24 20:22:52,717 | INFO     | mean x: 1740418014.5
[2025-02-24 21:27:08] 2025-02-24 20:22:52,717 | INFO     | mean y: 2378831.8641618495
[2025-02-24 21:27:08] 2025-02-24 20:22:52,717 | INFO     | -- intersect: 1987613315.8226285
[2025-02-24 21:27:08] 2025-02-24 20:22:52,717 | INFO     | intersect: 1987613315.8226285
[2025-02-24 21:27:08] 2025-02-24 20:22:52,718 | INFO     | chi2: 0.9737626160093662
[2025-02-24 21:27:08] 2025-02-24 20:22:52,718 | INFO     | current chi2=0.9737626160093662 (change=61.90216462233749 %)
[2025-02-24 21:27:08] 2025-02-24 20:22:52,718 | INFO     | model: linear, x: [1740407797.0, 1740407858.0, 1740407919.0, 1740407980.0, 1740408041.0, 1740408102.0, 1740408163.0, 1740408224.0, 1740408285.0, 1740408346.0, 1740
[2025-02-24 21:27:08] 2025-02-24 20:22:52,719 | INFO     | sum of square deviations: 12295263090.0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,722 | INFO     | sum of deviations: -31966070767.0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,722 | INFO     | mean x: 1740418167.0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,722 | INFO     | mean y: 2383625.1818181816
[2025-02-24 21:27:08] 2025-02-24 20:22:52,722 | INFO     | -- intersect: 4527242498.331349
[2025-02-24 21:27:08] 2025-02-24 20:22:52,722 | INFO     | intersect: 4527242498.331349
[2025-02-24 21:27:08] 2025-02-24 20:22:52,723 | INFO     | chi2: 0.8474541810285428
[2025-02-24 21:27:08] 2025-02-24 20:22:52,723 | INFO     | current chi2=0.8474541810285428 (change=12.97117314879631 %)
[2025-02-24 21:27:08] 2025-02-24 20:22:52,723 | INFO     | left removable region: 30
[2025-02-24 21:27:08] 2025-02-24 20:22:52,723 | INFO     | model: linear, x: [1740408712.0, 1740408773.0, 1740408834.0, 1740408895.0, 1740408956.0, 1740409017.0, 1740409078.0, 1740409139.0, 1740409200.0, 1740409261.0, 1740
[2025-02-24 21:27:08] 2025-02-24 20:22:52,723 | INFO     | sum of square deviations: 10160711440.0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,726 | INFO     | sum of deviations: -15555236435.999998
[2025-02-24 21:27:08] 2025-02-24 20:22:52,726 | INFO     | mean x: 1740418441.5
[2025-02-24 21:27:08] 2025-02-24 20:22:52,726 | INFO     | mean y: 2391759.60625
[2025-02-24 21:27:08] 2025-02-24 20:22:52,727 | INFO     | -- intersect: 2666833173.475113
[2025-02-24 21:27:08] 2025-02-24 20:22:52,727 | INFO     | intersect: 2666833173.475113
[2025-02-24 21:27:08] 2025-02-24 20:22:52,727 | INFO     | chi2: 0.008940278793767477
[2025-02-24 21:27:08] 2025-02-24 20:22:52,727 | INFO     | -- intersect: 2666833173.475113
[2025-02-24 21:27:08] 2025-02-24 20:22:52,727 | INFO     | current memory leak: -1.53 B/s (using 320 data points, chi2=0.01)
[2025-02-24 21:27:08] 2025-02-24 20:22:52,728 | INFO     | ..............................
[2025-02-24 21:27:08] 2025-02-24 20:22:52,728 | INFO     | . Timing measurements:
[2025-02-24 21:27:08] 2025-02-24 20:22:52,728 | INFO     | . get job = 0 s
[2025-02-24 21:27:08] 2025-02-24 20:22:52,728 | INFO     | . initial setup = 1 s
[2025-02-24 21:27:08] 2025-02-24 20:22:52,729 | INFO     | . payload setup = 9 s
[2025-02-24 21:27:08] 2025-02-24 20:22:52,729 | INFO     | . stage-in = 0 s
[2025-02-24 21:27:08] 2025-02-24 20:22:52,729 | INFO     | . payload execution = 21680 s
[2025-02-24 21:27:08] 2025-02-24 20:22:52,729 | INFO     | . stage-out = 1 s
[2025-02-24 21:27:08] 2025-02-24 20:22:52,729 | INFO     | . log creation = 0 s
[2025-02-24 21:27:08] 2025-02-24 20:22:52,729 | INFO     | ..............................
[2025-02-24 21:27:08] 2025-02-24 20:22:52,831 | INFO     | 
[2025-02-24 21:27:08] 2025-02-24 20:22:52,831 | INFO     | job summary report
[2025-02-24 21:27:08] 2025-02-24 20:22:52,831 | INFO     | --------------------------------------------------
[2025-02-24 21:27:08] 2025-02-24 20:22:52,832 | INFO     | PanDA job id: 6522148374
[2025-02-24 21:27:08] 2025-02-24 20:22:52,832 | INFO     | task id: 43205075
[2025-02-24 21:27:08] 2025-02-24 20:22:52,832 | INFO     | errors: (none)
[2025-02-24 21:27:08] 2025-02-24 20:22:52,832 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 21:27:08] 2025-02-24 20:22:52,832 | INFO     | pilot state: finished 
[2025-02-24 21:27:08] 2025-02-24 20:22:52,832 | INFO     | transexitcode: 0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,832 | INFO     | exeerrorcode: 0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,832 | INFO     | exeerrordiag: 
[2025-02-24 21:27:08] 2025-02-24 20:22:52,832 | INFO     | exitcode: 0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,832 | INFO     | exitmsg: OK
[2025-02-24 21:27:08] 2025-02-24 20:22:52,832 | INFO     | cpuconsumptiontime: 82077 s
[2025-02-24 21:27:08] 2025-02-24 20:22:52,833 | INFO     | nevents: 400
[2025-02-24 21:27:08] 2025-02-24 20:22:52,833 | INFO     | neventsw: 0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,833 | INFO     | pid: 831949
[2025-02-24 21:27:08] 2025-02-24 20:22:52,833 | INFO     | pgrp: 831949
[2025-02-24 21:27:08] 2025-02-24 20:22:52,833 | INFO     | corecount: 4
[2025-02-24 21:27:08] 2025-02-24 20:22:52,833 | INFO     | event service: False
[2025-02-24 21:27:08] 2025-02-24 20:22:52,833 | INFO     | sizes: {0: 2383159, 1: 2383358, 7: 2383564, 11: 2383592, 21693: 2416968, 21695: 2425931, 21697: 2426115, 21706: 2426285}
[2025-02-24 21:27:08] 2025-02-24 20:22:52,833 | INFO     | --------------------------------------------------
[2025-02-24 21:27:08] 2025-02-24 20:22:52,833 | INFO     | 
[2025-02-24 21:27:08] 2025-02-24 20:22:52,833 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2025-02-24 21:27:08] 2025-02-24 20:22:52,864 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,864 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,864 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,864 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,865 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 21:27:08] 2025-02-24 20:22:52,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,866 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 21:27:08] 2025-02-24 20:22:52,866 | INFO     | job 6522148374 has completed (purged errors)
[2025-02-24 21:27:08] 2025-02-24 20:22:52,866 | INFO     | overall cleanup function is called
[2025-02-24 21:27:08] 2025-02-24 20:22:53,874 | INFO     | --- collectZombieJob: --- 10, [831949]
[2025-02-24 21:27:08] 2025-02-24 20:22:53,874 | INFO     | zombie collector waiting for pid 831949
[2025-02-24 21:27:08] 2025-02-24 20:22:53,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 21:27:08] 2025-02-24 20:22:53,875 | INFO     | collected zombie processes
[2025-02-24 21:27:08] 2025-02-24 20:22:53,875 | INFO     | will attempt to kill all subprocesses of pid=831949
[2025-02-24 21:27:08] 2025-02-24 20:22:54,242 | INFO     | process IDs to be killed: [831949] (in reverse order)
[2025-02-24 21:27:08] 2025-02-24 20:22:54,504 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 21:27:08] 2025-02-24 20:22:54,505 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 21:27:08] 2025-02-24 20:22:54,533 | INFO     | did not find any defunct processes belonging to 831949
[2025-02-24 21:27:08] 2025-02-24 20:22:54,562 | INFO     | did not find any defunct processes belonging to 831949
[2025-02-24 21:27:08] 2025-02-24 20:22:54,562 | INFO     | ready for new job
[2025-02-24 21:27:08] 2025-02-24 20:22:54,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 21:27:08] 2025-02-24 20:22:54,565 | INFO     | **************************************
[2025-02-24 21:27:08] 2025-02-24 20:22:54,566 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 21:27:08] 2025-02-24 20:22:54,566 | INFO     | **************************************
[2025-02-24 21:27:08] 2025-02-24 20:22:54,566 | INFO     | 
[2025-02-24 21:27:08] 2025-02-24 20:22:54,574 | INFO     | architecture information:
[2025-02-24 21:27:08] 2025-02-24 20:22:54,575 | INFO     | executing command: cat /etc/os-release
[2025-02-24 21:27:08] 2025-02-24 20:22:54,599 | INFO     | cat /etc/os-release:
[2025-02-24 21:27:08] NAME="CentOS Linux"
[2025-02-24 21:27:08] VERSION="7 (Core)"
[2025-02-24 21:27:08] ID="centos"
[2025-02-24 21:27:08] ID_LIKE="rhel fedora"
[2025-02-24 21:27:08] VERSION_ID="7"
[2025-02-24 21:27:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 21:27:08] ANSI_COLOR="0;31"
[2025-02-24 21:27:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 21:27:08] HOME_URL="https://www.centos.org/"
[2025-02-24 21:27:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 21:27:08] 
[2025-02-24 21:27:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 21:27:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 21:27:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 21:27:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 21:27:08] 
[2025-02-24 21:27:08] 2025-02-24 20:22:54,599 | INFO     | **************************************
[2025-02-24 21:27:08] 2025-02-24 20:22:55,103 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2025-02-24 21:27:08] 2025-02-24 20:22:55,125 | INFO     | sufficient remaining disk space (3233849278464 B)
[2025-02-24 21:27:08] 2025-02-24 20:22:55,125 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 21:27:08] 2025-02-24 20:22:55,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 21:27:08] 2025-02-24 20:22:55,170 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 21:27:08] 2025-02-24 20:22:55,170 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 21:27:08] 2025-02-24 20:22:55,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 21:27:08] 2025-02-24 20:22:55,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 21:27:08] 2025-02-24 20:22:55,333 | INFO     | aborting loop
[2025-02-24 21:27:08] 2025-02-24 20:22:55,961 | INFO     | all data control threads have been joined
[2025-02-24 21:27:08] 2025-02-24 20:22:56,132 | INFO     | [job] retrieve thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:56,272 | INFO     | all job control threads have been joined
[2025-02-24 21:27:08] 2025-02-24 20:22:56,338 | INFO     | [job] job monitor thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:56,432 | INFO     | [job] validate thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:56,492 | INFO     | all payload control threads have been joined
[2025-02-24 21:27:08] 2025-02-24 20:22:56,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 21:27:08] 2025-02-24 20:22:56,688 | INFO     | [payload] validate_post thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:56,970 | INFO     | [data] control thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:56,992 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:57,092 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:57,191 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:57,278 | INFO     | [job] control thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:57,306 | INFO     | [payload] failed_post thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:57,335 | INFO     | [data] copytool_in thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:57,498 | INFO     | [payload] control thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:57,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 21:27:08] 2025-02-24 20:22:58,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 21:27:08] 2025-02-24 20:22:58,586 | INFO     | [data] copytool_out thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:22:58,847 | INFO     | [job] queue monitor thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:23:02,533 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:23:05,440 | INFO     | job.realtimelogging is not enabled
[2025-02-24 21:27:08] 2025-02-24 20:23:06,445 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 21:27:08] 2025-02-24 20:23:08,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22972720027456)>', '<ExcThread(monitor, started 22972488193792)>']
[2025-02-24 21:27:08] 2025-02-24 20:23:09,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 21:27:08] 2025-02-24 20:23:09,248 | INFO     | [monitor] control thread has ended
[2025-02-24 21:27:08] 2025-02-24 20:23:13,485 | INFO     | all workflow threads have been joined
[2025-02-24 21:27:08] 2025-02-24 20:23:13,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 21:27:08] 2025-02-24 20:23:13,486 | INFO     | traces error code: 0
[2025-02-24 21:27:08] 2025-02-24 20:23:13,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 21:27:08] 2025-02-24 20:23:13,660 [wrapper] ==== pilot stdout END ====
[2025-02-24 21:27:08] 2025-02-24 20:23:13,664 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 21:27:08] 2025-02-24 20:23:13,668 [wrapper] pilotpid: 824490
[2025-02-24 21:27:08] 2025-02-24 20:23:13,672 [wrapper] Pilot exit status: 0
[2025-02-24 21:27:08] 2025-02-24 20:23:13,687 [wrapper] pandaids: 6522148374
[2025-02-24 21:27:08] 2025-02-24 20:23:13,848 [wrapper] cleanup supervisor_pilot 2075682 824491
[2025-02-24 21:27:08] 2025-02-24 20:23:13,854 [wrapper] Test setup, not cleaning
[2025-02-24 21:27:08] 2025-02-24 20:23:13,862 [wrapper] apfmon messages muted
[2025-02-24 21:27:08] 2025-02-24 20:23:13,866 [wrapper] ==== wrapper stdout END ====
[2025-02-24 21:27:08] 2025-02-24 20:23:13,870 [wrapper] ==== wrapper stderr END ====
[2025-02-24 21:27:08]  *** Error codes and diagnostics ***
[2025-02-24 21:27:08]     "exeErrorCode": 0,
[2025-02-24 21:27:08]     "exeErrorDiag": "",
[2025-02-24 21:27:08]     "pilotErrorCode": 0,
[2025-02-24 21:27:08]     "pilotErrorDiag": "",
[2025-02-24 21:27:08]  *** Listing of results directory ***
[2025-02-24 21:27:08] total 666752
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc    491065 Feb 21 13:13 pilot3.tar.gz
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc      5118 Feb 21 13:29 queuedata.json
[2025-02-24 21:27:08] -rwx------ 1 boinc boinc     35865 Feb 21 13:29 runpilot2-wrapper.sh
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc       100 Feb 24 15:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 21:27:08] -rwxr-xr-x 1 boinc boinc      7986 Feb 24 15:20 run_atlas
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc       105 Feb 24 15:20 job.xml
[2025-02-24 21:27:08] -rw-r--r-- 2 boinc boinc 346026579 Feb 24 15:20 EVNT.43092757._001157.pool.root.1
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc      6676 Feb 24 15:20 init_data.xml
[2025-02-24 21:27:08] -rw-r--r-- 2 boinc boinc     17569 Feb 24 15:20 start_atlas.sh
[2025-02-24 21:27:08] drwxrwx--x 2 boinc boinc      4096 Feb 24 15:20 shared
[2025-02-24 21:27:08] -rw-r--r-- 2 boinc boinc    503558 Feb 24 15:20 input.tar.gz
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc         0 Feb 24 15:20 boinc_lockfile
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc      2556 Feb 24 15:20 pandaJob.out
[2025-02-24 21:27:08] -rw------- 1 boinc boinc       424 Feb 24 15:20 setup.sh.local
[2025-02-24 21:27:08] -rw------- 1 boinc boinc    987749 Feb 24 15:20 agis_schedconf.cvmfs.json
[2025-02-24 21:27:08] drwx------ 4 boinc boinc      4096 Feb 24 15:20 pilot3
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc       528 Feb 24 21:21 boinc_task_state.xml
[2025-02-24 21:27:08] -rw------- 1 boinc boinc 327307686 Feb 24 21:21 HITS.43205075._057433.pool.root.1
[2025-02-24 21:27:08] -rw------- 1 boinc boinc        95 Feb 24 21:22 pilot_heartbeat.json
[2025-02-24 21:27:08] -rw------- 1 boinc boinc      1030 Feb 24 21:22 memory_monitor_summary.json
[2025-02-24 21:27:08] -rw------- 1 boinc boinc   1582569 Feb 24 21:22 agis_ddmendpoints.agis.ALL.json
[2025-02-24 21:27:08] -rw------- 1 boinc boinc    436089 Feb 24 21:22 log.43205075._057433.job.log.tgz.1
[2025-02-24 21:27:08] -rw------- 1 boinc boinc      7705 Feb 24 21:22 heartbeat.json
[2025-02-24 21:27:08] -rw------- 1 boinc boinc      4298 Feb 24 21:23 pilotlog.txt
[2025-02-24 21:27:08] -rw------- 1 boinc boinc   2366845 Feb 24 21:23 log.43205075._057433.job.log.1
[2025-02-24 21:27:08] -rw------- 1 boinc boinc       357 Feb 24 21:23 output.list
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc       620 Feb 24 21:23 runtime_log
[2025-02-24 21:27:08] -rw------- 1 boinc boinc   2826240 Feb 24 21:23 result.tar.gz
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc     11424 Feb 24 21:23 runtime_log.err
[2025-02-24 21:27:08] -rw------- 1 boinc boinc       667 Feb 24 21:23 MzbMDmkKh56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm2HsKDm1LPyQo.diag
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc        27 Feb 24 21:26 wrapper_checkpoint.txt
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc      8192 Feb 24 21:27 boinc_mmap_file
[2025-02-24 21:27:08] -rw-r--r-- 1 boinc boinc     21276 Feb 24 21:27 stderr.txt
[2025-02-24 21:27:08] HITS file was successfully produced:
[2025-02-24 21:27:08] -rw------- 1 boinc boinc 327307686 Feb 24 21:21 shared/HITS.pool.root.1
[2025-02-24 21:27:08]  *** Contents of shared directory: ***
[2025-02-24 21:27:08] total 660840
[2025-02-24 21:27:08] -rw-r--r-- 2 boinc boinc 346026579 Feb 24 15:20 ATLAS.root_0
[2025-02-24 21:27:08] -rw-r--r-- 2 boinc boinc     17569 Feb 24 15:20 start_atlas.sh
[2025-02-24 21:27:08] -rw-r--r-- 2 boinc boinc    503558 Feb 24 15:20 input.tar.gz
[2025-02-24 21:27:08] -rw------- 1 boinc boinc 327307686 Feb 24 21:21 HITS.pool.root.1
[2025-02-24 21:27:08] -rw------- 1 boinc boinc   2826240 Feb 24 21:23 result.tar.gz
21:27:09 (820504): run_atlas exited; CPU time 81683.340382
21:27:09 (820504): called boinc_finish(0)

</stderr_txt>
]]>

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