Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-22 06:59:41 (3352): Detected: vboxwrapper 26206
2025-02-22 06:59:41 (3352): Detected: BOINC client v7.16.11
2025-02-22 06:59:41 (3352): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-02-22 06:59:42 (3352): Successfully copied 'init_data.xml' to the shared directory.
2025-02-22 06:59:42 (3352): Create VM. (boinc_dc894ec94ccc425f, slot#0)
2025-02-22 06:59:43 (3352): Setting Memory Size for VM. (4400MB)
2025-02-22 06:59:43 (3352): Setting CPU Count for VM. (4)
2025-02-22 06:59:43 (3352): Setting Chipset Options for VM.
2025-02-22 06:59:44 (3352): Setting Graphics Controller Options for VM.
2025-02-22 06:59:44 (3352): Setting Boot Options for VM.
2025-02-22 06:59:44 (3352): Setting Network Configuration for NAT.
2025-02-22 06:59:44 (3352): Enabling VM Network Access.
2025-02-22 06:59:45 (3352): Disabling USB Support for VM.
2025-02-22 06:59:45 (3352): Disabling COM Port Support for VM.
2025-02-22 06:59:45 (3352): Disabling LPT Port Support for VM.
2025-02-22 06:59:45 (3352): Disabling Audio Support for VM.
2025-02-22 06:59:46 (3352): Disabling Clipboard Support for VM.
2025-02-22 06:59:46 (3352): Disabling Drag and Drop Support for VM.
2025-02-22 06:59:46 (3352): Adding storage controller(s) to VM.
2025-02-22 06:59:46 (3352): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-22 06:59:47 (3352): Adding VirtualBox Guest Additions to VM.
2025-02-22 06:59:47 (3352): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-22 06:59:48 (3352): forwarding host port 51752 to guest port 80
2025-02-22 06:59:48 (3352): Enabling remote desktop for VM.
2025-02-22 06:59:48 (3352): Required extension pack not installed, remote desktop not enabled.
2025-02-22 06:59:48 (3352): Enabling shared directory for VM.
2025-02-22 06:59:49 (3352): Starting VM using VBoxManage interface. (boinc_dc894ec94ccc425f, slot#0)
2025-02-22 06:59:53 (3352): Successfully started VM. (PID = '17460')
2025-02-22 06:59:53 (3352): Reporting VM Process ID to BOINC.
2025-02-22 06:59:53 (3352): Guest Log: BIOS: VirtualBox 6.1.12
2025-02-22 06:59:53 (3352): Guest Log: CPUID EDX: 0x178bfbff
2025-02-22 06:59:53 (3352): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-22 06:59:53 (3352): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-22 06:59:53 (3352): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-22 06:59:53 (3352): Detected: Web Application Enabled (http://localhost:51752)
2025-02-22 06:59:53 (3352): Preference change detected
2025-02-22 06:59:53 (3352): Setting CPU throttle for VM. (100%)
2025-02-22 06:59:53 (3352): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-22 06:59:55 (3352): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-22 06:59:55 (3352): Guest Log: BIOS: Booting from Hard Disk...
2025-02-22 06:59:58 (3352): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-22 06:59:58 (3352): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-22 06:59:58 (3352): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-22 07:00:11 (3352): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-22 07:00:11 (3352): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-22 07:00:22 (3352): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-22 07:00:22 (3352): Guest Log: 00:00:00.000232 main     Log opened 2025-02-22T07:00:19.780891000Z
2025-02-22 07:00:22 (3352): Guest Log: 00:00:00.000406 main     OS Product: Linux
2025-02-22 07:00:22 (3352): Guest Log: 00:00:00.000463 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-22 07:00:22 (3352): Guest Log: 00:00:00.000526 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-22 07:00:22 (3352): Guest Log: 00:00:00.000555 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-22 07:00:22 (3352): Guest Log: 00:00:00.000555 main     Process ID: 1304
2025-02-22 07:00:22 (3352): Guest Log: 00:00:00.000556 main     Package type: LINUX_64BITS_GENERIC
2025-02-22 07:00:22 (3352): Guest Log: 00:00:00.002389 main     5.2.32 r132073 started. Verbose level = 0
2025-02-22 07:00:22 (3352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-22 07:00:22 (3352): Guest Log: [INFO] Mounting shared directory
2025-02-22 07:00:22 (3352): Guest Log: [INFO] Checking for init_data.xml
2025-02-22 07:00:28 (3352): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-22 07:00:28 (3352): Guest Log: [INFO] Detected branch: prod
2025-02-22 07:00:28 (3352): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-22 07:00:28 (3352): Guest Log: Copying input files
2025-02-22 07:00:32 (3352): Guest Log: 00:00:10.013402 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 212 353 877 000ns (GuestNow=1 740 232 832 139 952 000 ns GuestLast=1 740 207 619 786 075 000 ns fSetTimeLastLoop=true )
2025-02-22 07:00:44 (3352): Guest Log: Copied input files into RunAtlas.
2025-02-22 07:00:44 (3352): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-22 07:00:44 (3352): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-22 07:00:44 (3352): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-22 07:00:44 (3352): Guest Log: Further information can be found at the LHC@home message board.
2025-02-22 07:00:56 (3352): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-22 07:00:56 (3352): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-22 07:00:56 (3352): Guest Log: 2.6.3.0 1584 0 30140 142941 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-22 07:01:00 (3352): Guest Log: copied the webapp to /var/www
2025-02-22 07:01:00 (3352): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-22 07:01:00 (3352): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-22 07:01:01 (3352): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-22 07:01:01 (3352): Guest Log:  *** Starting ATLAS job. (PandaID=6522148294 taskID=43078919) ***
2025-02-22 08:43:20 (3352): Status Report: Elapsed Time: '6001.370237'
2025-02-22 08:43:20 (3352): Status Report: CPU Time: '19816.328125'
2025-02-22 10:28:17 (3352): Status Report: Elapsed Time: '12001.969465'
2025-02-22 10:28:17 (3352): Status Report: CPU Time: '44546.546875'
2025-02-22 12:12:08 (3352): Status Report: Elapsed Time: '18002.558624'
2025-02-22 12:12:08 (3352): Status Report: CPU Time: '69039.781250'
2025-02-22 13:56:08 (3352): Status Report: Elapsed Time: '24003.532549'
2025-02-22 13:56:08 (3352): Status Report: CPU Time: '93562.671875'
2025-02-22 14:04:19 (3352): Guest Log:  *** Job finished ***
2025-02-22 14:04:19 (3352): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:10,130 | INFO     | [job] validate thread has finished
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:10,489 | INFO     | [payload] failed_post thread has finished
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:11,881 | INFO     | [data] queue_monitor thread has finished
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:13,488 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716388341568)>', '<ExcThread(monitor, started 140715778619136)>']
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:13,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:13,954 | INFO     | [monitor] control thread has ended
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,513 | INFO     | all workflow threads have been joined
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,513 | INFO     | end of generic workflow (traces error code: 0)
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,513 | INFO     | traces error code: 0
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,605 [wrapper] ==== pilot stdout END ====
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,610 [wrapper] ==== wrapper stdout RESUME ====
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,615 [wrapper] pilotpid: 5925
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,620 [wrapper] Pilot exit status: 0
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,763 [wrapper] pandaids: 6522148294
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,800 [wrapper] cleanup supervisor_pilot  2221 5926
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,806 [wrapper] Test setup, not cleaning
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,818 [wrapper] apfmon messages muted
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,824 [wrapper] ==== wrapper stdout END ====
2025-02-22 14:04:19 (3352): Guest Log: 2025-02-22 21:04:18,829 [wrapper] ==== wrapper stderr END ====
2025-02-22 14:04:19 (3352): Guest Log:  *** Error codes and diagnostics ***
2025-02-22 14:04:19 (3352): Guest Log:     "exeErrorCode": 0,
2025-02-22 14:04:19 (3352): Guest Log:     "exeErrorDiag": "",
2025-02-22 14:04:19 (3352): Guest Log:     "pilotErrorCode": 0,
2025-02-22 14:04:19 (3352): Guest Log:     "pilotErrorDiag": "",
2025-02-22 14:04:19 (3352): Guest Log:  *** Listing of results directory ***
2025-02-22 14:04:19 (3352): Guest Log: total 331008
2025-02-22 14:04:19 (3352): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 21 12:13 pilot3.tar.gz
2025-02-22 14:04:19 (3352): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 21 12:24 queuedata.json
2025-02-22 14:04:19 (3352): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 21 12:25 runpilot2-wrapper.sh
2025-02-22 14:04:19 (3352): Guest Log: -rwxr-xr-x. 1 atlas atlas     12100 Feb 22 14:00 init_data.xml
2025-02-22 14:04:19 (3352): Guest Log: -rwxr-xr-x. 1 atlas atlas    503568 Feb 22 14:00 input.tar.gz
2025-02-22 14:04:19 (3352): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 22 14:00 start_atlas.sh
2025-02-22 14:04:19 (3352): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 22 14:00 EVNT.43078917._001728.pool.root.1 -> /data/./ATLAS.root_0
2025-02-22 14:04:19 (3352): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 22 14:01 pandaJob.out
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas       424 Feb 22 14:01 setup.sh.local
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas    988072 Feb 22 14:02 agis_schedconf.cvmfs.json
2025-02-22 14:04:19 (3352): Guest Log: drwx------. 4 atlas atlas      4096 Feb 22 14:02 pilot3
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas 329492331 Feb 22 21:03 HITS.43078919._083178.pool.root.1
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas        96 Feb 22 21:03 pilot_heartbeat.json
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas      1030 Feb 22 21:03 memory_monitor_summary.json
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 22 21:03 agis_ddmendpoints.agis.ALL.json
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas    427507 Feb 22 21:03 log.43078919._083178.job.log.tgz.1
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas      7741 Feb 22 21:04 heartbeat.json
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas      4584 Feb 22 21:04 pilotlog.txt
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas   2430655 Feb 22 21:04 log.43078919._083178.job.log.1
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas       357 Feb 22 21:04 output.list
2025-02-22 14:04:19 (3352): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 22 21:04 runtime_log
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas   2877440 Feb 22 21:04 result.tar.gz
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas       672 Feb 22 21:04 wrKNDmYHh56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmgMdKDmDijxGo.diag
2025-02-22 14:04:19 (3352): Guest Log: -rw-r--r--. 1 atlas atlas     10981 Feb 22 21:04 runtime_log.err
2025-02-22 14:04:19 (3352): Guest Log: Looking for outputfile HITS.43078919._083178.pool.root.1
2025-02-22 14:04:19 (3352): Guest Log: HITS file was successfully produced
2025-02-22 14:04:19 (3352): Guest Log: -rw-------. 1 atlas atlas 329492331 Feb 22 21:03 /home/atlas/RunAtlas/HITS.43078919._083178.pool.root.1
2025-02-22 14:04:21 (3352): Guest Log: Successfully finished the ATLAS job!
2025-02-22 14:04:21 (3352): Guest Log: Copying the results back to the shared directory!
2025-02-22 14:04:21 (3352): Guest Log:  *** Contents of shared directory: ***
2025-02-22 14:04:21 (3352): Guest Log: total 664528
2025-02-22 14:04:21 (3352): Guest Log: -rwxrwxrwx. 1 root root 347563167 Feb 22 13:59 ATLAS.root_0
2025-02-22 14:04:21 (3352): Guest Log: -rwxrwxrwx. 1 root root 329492331 Feb 22 21:04 HITS.pool.root.1
2025-02-22 14:04:21 (3352): Guest Log: -rwxrwxrwx. 1 root root     12100 Feb 22 13:59 init_data.xml
2025-02-22 14:04:21 (3352): Guest Log: -rwxrwxrwx. 1 root root    503568 Feb 21 16:19 input.tar.gz
2025-02-22 14:04:21 (3352): Guest Log: -rwxrwxrwx. 1 root root   2877440 Feb 22 21:04 result.tar.gz
2025-02-22 14:04:21 (3352): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 21 16:19 start_atlas.sh
2025-02-22 14:04:21 (3352): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-22 14:04:21 (3352): VM Completion File Detected.
2025-02-22 14:04:21 (3352): Powering off VM.
2025-02-22 14:04:22 (3352): Successfully stopped VM.
2025-02-22 14:04:22 (3352): Deregistering VM. (boinc_dc894ec94ccc425f, slot#0)
2025-02-22 14:04:22 (3352): Removing network bandwidth throttle group from VM.
2025-02-22 14:04:22 (3352): Removing VM from VirtualBox.
14:04:28 (3352): called boinc_finish(0)

</stderr_txt>
]]>

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