Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
09:55:28 (3282602): wrapper (7.7.26015): starting
09:55:28 (3282602): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 09:55:28] Arguments: --nthreads 4
[2025-02-23 09:55:28] Threads: 4
[2025-02-23 09:55:28] Checking for CVMFS
[2025-02-23 09:55:28] No cvmfs_config command found, will try listing directly
[2025-02-23 09:55:28] CVMFS is ok
[2025-02-23 09:55:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 09:55:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 09:55:28] Further information can be found at the LHC@home message board.
[2025-02-23 09:55:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 09:55:28] Checking for apptainer binary...
[2025-02-23 09:55:28] which: no apptainer in ((null))
[2025-02-23 09:55:28] apptainer is not installed, using version from CVMFS
[2025-02-23 09:55:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 09:55:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-02-23 09:55:28] apptainer works
[2025-02-23 09:55:28] Set ATHENA_PROC_NUMBER=4
[2025-02-23 09:55:28] Set ATHENA_CORE_NUMBER=4
[2025-02-23 09:55:28] Starting ATLAS job with PandaID=6522039577
[2025-02-23 09:55:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:29:37 (1654892): wrapper (7.7.26015): starting
21:29:37 (1654892): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 21:29:37] Arguments: --nthreads 4
[2025-02-23 21:29:37] Threads: 4
[2025-02-23 21:29:37] This job has been restarted, cleaning up previous attempt
[2025-02-23 21:29:37] Checking for CVMFS
[2025-02-23 21:29:37] No cvmfs_config command found, will try listing directly
[2025-02-23 21:29:37] CVMFS is ok
[2025-02-23 21:29:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 21:29:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 21:29:37] Further information can be found at the LHC@home message board.
[2025-02-23 21:29:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 21:29:37] Checking for apptainer binary...
[2025-02-23 21:29:37] which: no apptainer in ((null))
[2025-02-23 21:29:37] apptainer is not installed, using version from CVMFS
[2025-02-23 21:29:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 21:29:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-02-23 21:29:37] apptainer works
[2025-02-23 21:29:37] Set ATHENA_PROC_NUMBER=4
[2025-02-23 21:29:37] Set ATHENA_CORE_NUMBER=4
[2025-02-23 21:29:37] Starting ATLAS job with PandaID=6522039577
[2025-02-23 21:29:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:18:58 (2752135): wrapper (7.7.26015): starting
02:18:58 (2752135): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 02:18:58] Arguments: --nthreads 4
[2025-02-24 02:18:58] Threads: 4
[2025-02-24 02:18:58] This job has been restarted, cleaning up previous attempt
[2025-02-24 02:18:58] Checking for CVMFS
[2025-02-24 02:18:58] No cvmfs_config command found, will try listing directly
[2025-02-24 02:18:58] CVMFS is ok
[2025-02-24 02:18:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 02:18:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 02:18:58] Further information can be found at the LHC@home message board.
[2025-02-24 02:18:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 02:18:58] Checking for apptainer binary...
[2025-02-24 02:18:58] which: no apptainer in ((null))
[2025-02-24 02:18:58] apptainer is not installed, using version from CVMFS
[2025-02-24 02:18:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 02:18:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-02-24 02:18:58] apptainer works
[2025-02-24 02:18:58] Set ATHENA_PROC_NUMBER=4
[2025-02-24 02:18:58] Set ATHENA_CORE_NUMBER=4
[2025-02-24 02:18:58] Starting ATLAS job with PandaID=6522039577
[2025-02-24 02:18:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 02:22:09] Job failed
[2025-02-24 02:22:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-02-24 02:22:09] ++ pwd
[2025-02-24 02:22:09] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot16/slots/0/
[2025-02-24 02:22:09] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot16/slots/0/
[2025-02-24 02:22:09] + mv ATLAS.root_0 EVNT.43078917._002099.pool.root.1
[2025-02-24 02:22:09] mv: 'ATLAS.root_0' and 'EVNT.43078917._002099.pool.root.1' are the same file
[2025-02-24 02:22:09] + tar --strip-components=5 -xvf input.tar.gz
[2025-02-24 02:22:09] + umask 077
[2025-02-24 02:22:09] ++ date +%s
[2025-02-24 02:22:09] + ACCOUNTING_STARTTIME=1740359938
[2025-02-24 02:22:09] + echo 'Detecting resource accounting method available for the job.'
[2025-02-24 02:22:09] Detecting resource accounting method available for the job.
[2025-02-24 02:22:09] + JOB_ACCOUNTING=
[2025-02-24 02:22:09] + command -v arc-job-cgroup
[2025-02-24 02:22:09] + '[' -z '' ']'
[2025-02-24 02:22:09] + GNU_TIME=/usr/bin/time
[2025-02-24 02:22:09] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-02-24 02:22:09] Looking for /usr/bin/time tool for accounting measurements
[2025-02-24 02:22:09] + '[' '!' -z /usr/bin/time ']'
[2025-02-24 02:22:09] + /usr/bin/time --version
[2025-02-24 02:22:09] + echo 'GNU time found and will be used for job accounting.'
[2025-02-24 02:22:09] GNU time found and will be used for job accounting.
[2025-02-24 02:22:09] + JOB_ACCOUNTING=gnutime
[2025-02-24 02:22:09] + '[' -z gnutime ']'
[2025-02-24 02:22:09] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-24 02:22:09] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-24 02:22:09] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-21/BOINC_MCORE/6522039577.out
[2025-02-24 02:22:09] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-21/BOINC_MCORE/6522039577.out
[2025-02-24 02:22:09] + export PILOT_NOKILL=YES
[2025-02-24 02:22:09] + PILOT_NOKILL=YES
[2025-02-24 02:22:09] + export GRID_GLOBAL_JOBID=wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-24 02:22:09] + GRID_GLOBAL_JOBID=wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-24 02:22:09] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-24 02:22:09] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-24 02:22:09] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-24 02:22:09] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-24 02:22:09] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-02-24 02:22:09] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-02-24 02:22:09] ++ pwd
[2025-02-24 02:22:09] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot16/slots/0
[2025-02-24 02:22:09] + RUNTIME_JOB_STDIN=/dev/null
[2025-02-24 02:22:09] ++ pwd
[2025-02-24 02:22:09] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot16/slots/0/log.43078919._082345.job.log.1
[2025-02-24 02:22:09] ++ pwd
[2025-02-24 02:22:09] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot16/slots/0/log.43078919._082345.job.log.1
[2025-02-24 02:22:09] ++ pwd
[2025-02-24 02:22:09] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot16/slots/0.diag
[2025-02-24 02:22:09] + '[' '!' -z '' ']'
[2025-02-24 02:22:09] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-02-24 02:22:09] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-02-24 02:22:09] + RUNTIME_FRONTEND_SEES_NODE=
[2025-02-24 02:22:09] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-02-24 02:22:09] + '[' '!' -z '' ']'
[2025-02-24 02:22:09] + '[' -z yes ']'
[2025-02-24 02:22:09] ++ pwd
[2025-02-24 02:22:09] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag
[2025-02-24 02:22:09] + runtimeenvironments=
[2025-02-24 02:22:09] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-24 02:22:09] + RTE_function_0 1
[2025-02-24 02:22:09] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-24 02:22:09] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-24 02:22:09] + export BOINC_APP=ATLAS
[2025-02-24 02:22:09] + BOINC_APP=ATLAS
[2025-02-24 02:22:09] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-24 02:22:09] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-24 02:22:09] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-24 02:22:09] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-24 02:22:09] + '[' -z 1 ']'
[2025-02-24 02:22:09] + '[' 1 == 1 ']'
[2025-02-24 02:22:09] + shift
[2025-02-24 02:22:09] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2025-02-24 02:22:09] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-24 02:22:09] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2025-02-24 02:22:09] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot16/slots/0/
[2025-02-24 02:22:09] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot16/slots/0/
[2025-02-24 02:22:09] + '[' -e /scratch/boinc/var/slot16/slots/0/init_data.xml ']'
[2025-02-24 02:22:09] + grep '<use_http_proxy/>' /scratch/boinc/var/slot16/slots/0/init_data.xml
[2025-02-24 02:22:09] + '[' -e /scratch/boinc/var/slot16/slots/0/init_data.xml ']'
[2025-02-24 02:22:09] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot16/slots/0/init_data.xml
[2025-02-24 02:22:09] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2025-02-24 02:22:09] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-24 02:22:09] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2025-02-24 02:22:09] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-24 02:22:09] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-24 02:22:09] + '[' 0 -ne 0 ']'
[2025-02-24 02:22:09] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-02-24 02:22:09] + '[' -f /etc/os-release ']'
[2025-02-24 02:22:09] +++ cat /etc/os-release
[2025-02-24 02:22:09] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-02-24 02:22:09] +++ NAME='CentOS Linux'
[2025-02-24 02:22:09] +++ VERSION='7 (Core)'
[2025-02-24 02:22:09] +++ ID=centos
[2025-02-24 02:22:09] +++ ID_LIKE='rhel fedora'
[2025-02-24 02:22:09] +++ VERSION_ID=7
[2025-02-24 02:22:09] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-02-24 02:22:09] +++ ANSI_COLOR='0;31'
[2025-02-24 02:22:09] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-02-24 02:22:09] +++ HOME_URL=https://www.centos.org/
[2025-02-24 02:22:09] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-02-24 02:22:09] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-02-24 02:22:09] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-02-24 02:22:09] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-02-24 02:22:09] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-02-24 02:22:09] ++ echo 'CentOS Linux 7 (Core)'
[2025-02-24 02:22:09] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-02-24 02:22:09] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-02-24 02:22:09] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-02-24 02:22:09] + HOME=/scratch/boinc/var/slot16/slots/0
[2025-02-24 02:22:09] + export HOME
[2025-02-24 02:22:09] + cd /scratch/boinc/var/slot16/slots/0
[2025-02-24 02:22:09] + '[' '!' -z '' ']'
[2025-02-24 02:22:09] + '[' -z '' ']'
[2025-02-24 02:22:09] ++ /bin/hostname -f
[2025-02-24 02:22:09] + nodename=skurut12.grid.cesnet.cz
[2025-02-24 02:22:09] + echo nodename=skurut12.grid.cesnet.cz
[2025-02-24 02:22:09] + echo Processors=2
[2025-02-24 02:22:09] + echo Nodecount=1
[2025-02-24 02:22:09] + echo Benchmark=HEPSPEC:1.0
[2025-02-24 02:22:09] + executable=./runpilot2-wrapper.sh
[2025-02-24 02:22:09] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-02-24 02:22:09] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-02-24 02:22:09] ++ head -n 1
[2025-02-24 02:22:09] ++ tr -d '\0'
[2025-02-24 02:22:09] + line1='#!/bin/bash'
[2025-02-24 02:22:09] ++ echo '#!/bin/bash'
[2025-02-24 02:22:09] ++ sed -n 's/^#! *//p'
[2025-02-24 02:22:09] + shebang=/bin/bash
[2025-02-24 02:22:09] ++ echo /bin/bash
[2025-02-24 02:22:09] ++ awk '{print $1}'
[2025-02-24 02:22:09] + interpreter=/bin/bash
[2025-02-24 02:22:09] + '[' /bin/bash = /usr/bin/env ']'
[2025-02-24 02:22:09] + '[' x/bin/bash = x ']'
[2025-02-24 02:22:09] + type /bin/bash
[2025-02-24 02:22:09] + '[' xgnutime = xgnutime ']'
[2025-02-24 02:22:09] + /usr/bin/time -o /scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.9.4.15 -z -t --piloturl local --mute --container
[2025-02-24 02:22:09] + RESULT=1
[2025-02-24 02:22:09] + sed -i -e /nodename=/d /scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag
[2025-02-24 02:22:09] ++ grep domain_name init_data.xml
[2025-02-24 02:22:09] ++ awk -F '>' '{print $2}'
[2025-02-24 02:22:09] ++ awk -F '<' '{print $1}'
[2025-02-24 02:22:09] ++ sed -e 's# #_#g'
[2025-02-24 02:22:09] + hostname=skurut12.grid.cesnet.cz
[2025-02-24 02:22:09] ++ grep user_name init_data.xml
[2025-02-24 02:22:09] ++ awk -F '>' '{print $2}'
[2025-02-24 02:22:09] ++ awk -F '<' '{print $1}'
[2025-02-24 02:22:09] ++ sed -e 's# #_#g'
[2025-02-24 02:22:09] + username=praguelcg2
[2025-02-24 02:22:09] + nodename=praguelcg2@skurut12.grid.cesnet.cz
[2025-02-24 02:22:09] + echo nodename=praguelcg2@skurut12.grid.cesnet.cz
[2025-02-24 02:22:09] + '[' -n 4 ']'
[2025-02-24 02:22:09] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag
[2025-02-24 02:22:09] + echo exitcode=1
[2025-02-24 02:22:09] + runtimeenvironments=
[2025-02-24 02:22:09] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-24 02:22:09] + RTE_function_0 2
[2025-02-24 02:22:09] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-24 02:22:09] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-24 02:22:09] + export BOINC_APP=ATLAS
[2025-02-24 02:22:09] + BOINC_APP=ATLAS
[2025-02-24 02:22:09] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-24 02:22:09] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-24 02:22:09] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-24 02:22:09] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-24 02:22:09] + '[' -z 2 ']'
[2025-02-24 02:22:09] + '[' 2 == 1 ']'
[2025-02-24 02:22:09] + '[' 0 -ne 0 ']'
[2025-02-24 02:22:09] + echo 'zip all output files'
[2025-02-24 02:22:09] + flist='*.diag '
[2025-02-24 02:22:09] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-24 02:22:09] + '[' -e ./heartbeat.json ']'
[2025-02-24 02:22:09] + flist='*.diag  ./heartbeat.json'
[2025-02-24 02:22:09] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-24 02:22:09] + '[' -e ./output.list ']'
[2025-02-24 02:22:09] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-24 02:22:09] + '[' -e ./log.43078919._082345.job.log.1 ']'
[2025-02-24 02:22:09] + flist='*.diag  ./heartbeat.json ./log.43078919._082345.job.log.1'
[2025-02-24 02:22:09] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-24 02:22:09] + '[' -e ./log.43078919._082345.job.log.1 ']'
[2025-02-24 02:22:09] + flist='*.diag  ./heartbeat.json ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1'
[2025-02-24 02:22:09] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-24 02:22:09] + '[' -e ./gmlog/ ']'
[2025-02-24 02:22:09] + '[' -f output.list ']'
[2025-02-24 02:22:09] + tar cvf result.tar.gz wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag ./heartbeat.json ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1
[2025-02-24 02:22:09] + '[' xgnutime = xcgroup ']'
[2025-02-24 02:22:09] + '[' -n '' ']'
[2025-02-24 02:22:09] + '[' -n '' ']'
[2025-02-24 02:22:09] ++ date +%s
[2025-02-24 02:22:09] + ACCOUNTING_ENDTIME=1740360129
[2025-02-24 02:22:09] ++ date -d '1970-01-01 UTC 1740359938 seconds' +%Y%m%d%H%M%SZ
[2025-02-24 02:22:09] + echo LRMSStartTime=20250224021858Z
[2025-02-24 02:22:09] ++ date -d '1970-01-01 UTC 1740360129 seconds' +%Y%m%d%H%M%SZ
[2025-02-24 02:22:09] + echo LRMSEndTime=20250224022209Z
[2025-02-24 02:22:09] + echo walltime=191
[2025-02-24 02:22:09] + echo exitcode=1
[2025-02-24 02:22:09] + exit 1
[2025-02-24 02:22:09] ./log.43078919._082345.job.log.1
[2025-02-24 02:22:09] ./runtime_log.err
[2025-02-24 02:22:09] ./PanDA_Pilot-6522039577/prmon.log
[2025-02-24 02:22:09] ./PanDA_Pilot-6522039577/pilotlog.txt
[2025-02-24 02:22:09] ./PanDA_Pilot-6522039577/PoolFileCatalog.xml
[2025-02-24 02:22:09] ./PanDA_Pilot-6522039577/log.EVNTtoHITS
[2025-02-24 02:22:09] ./runtime_log
[2025-02-24 02:22:09] ./pilotlog.txt
[2025-02-24 02:22:09] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-02-24 02:22:09] ./pilot3/pilot/util/loggingsupport.py
[2025-02-24 02:22:09] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-02-24 02:22:09] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-02-24 02:22:09] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-02-24 02:22:09] ./pilot3/pilot/util/realtimelogger.py
13:52:38 (957054): wrapper (7.7.26015): starting
13:52:38 (957054): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 13:52:38] Arguments: --nthreads 4
[2025-02-24 13:52:38] Threads: 4
[2025-02-24 13:52:38] This job has been restarted, cleaning up previous attempt
[2025-02-24 13:52:38] Checking for CVMFS
[2025-02-24 13:52:38] No cvmfs_config command found, will try listing directly
[2025-02-24 13:52:38] CVMFS is ok
[2025-02-24 13:52:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 13:52:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 13:52:38] Further information can be found at the LHC@home message board.
[2025-02-24 13:52:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 13:52:38] Checking for apptainer binary...
[2025-02-24 13:52:38] which: no apptainer in ((null))
[2025-02-24 13:52:38] apptainer is not installed, using version from CVMFS
[2025-02-24 13:52:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 13:52:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-02-24 13:52:39] apptainer works
[2025-02-24 13:52:39] Set ATHENA_PROC_NUMBER=4
[2025-02-24 13:52:39] Set ATHENA_CORE_NUMBER=4
[2025-02-24 13:52:39] Starting ATLAS job with PandaID=6522039577
[2025-02-24 13:52:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:18:02 (1097717): wrapper (7.7.26015): starting
14:18:02 (1097717): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 14:18:02] Arguments: --nthreads 4
[2025-02-24 14:18:02] Threads: 4
[2025-02-24 14:18:02] This job has been restarted, cleaning up previous attempt
[2025-02-24 14:18:02] Checking for CVMFS
[2025-02-24 14:18:02] No cvmfs_config command found, will try listing directly
[2025-02-24 14:18:02] CVMFS is ok
[2025-02-24 14:18:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 14:18:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 14:18:02] Further information can be found at the LHC@home message board.
[2025-02-24 14:18:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 14:18:02] Checking for apptainer binary...
[2025-02-24 14:18:02] which: no apptainer in ((null))
[2025-02-24 14:18:02] apptainer is not installed, using version from CVMFS
[2025-02-24 14:18:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 14:18:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-02-24 14:18:02] apptainer works
[2025-02-24 14:18:02] Set ATHENA_PROC_NUMBER=4
[2025-02-24 14:18:02] Set ATHENA_CORE_NUMBER=4
[2025-02-24 14:18:02] Starting ATLAS job with PandaID=6522039577
[2025-02-24 14:18:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:42:00 (1883471): wrapper (7.7.26015): starting
18:42:00 (1883471): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 18:42:00] Arguments: --nthreads 4
[2025-02-24 18:42:00] Threads: 4
[2025-02-24 18:42:00] This job has been restarted, cleaning up previous attempt
[2025-02-24 18:42:00] Checking for CVMFS
[2025-02-24 18:42:00] No cvmfs_config command found, will try listing directly
[2025-02-24 18:42:00] CVMFS is ok
[2025-02-24 18:42:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 18:42:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 18:42:00] Further information can be found at the LHC@home message board.
[2025-02-24 18:42:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 18:42:00] Checking for apptainer binary...
[2025-02-24 18:42:00] which: no apptainer in ((null))
[2025-02-24 18:42:00] apptainer is not installed, using version from CVMFS
[2025-02-24 18:42:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 18:42:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-02-24 18:42:01] apptainer works
[2025-02-24 18:42:01] Set ATHENA_PROC_NUMBER=4
[2025-02-24 18:42:01] Set ATHENA_CORE_NUMBER=4
[2025-02-24 18:42:01] Starting ATLAS job with PandaID=6522039577
[2025-02-24 18:42:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 18:45:32] Job failed
[2025-02-24 18:45:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-02-24 18:45:32] ++ pwd
[2025-02-24 18:45:32] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot16/slots/0/
[2025-02-24 18:45:32] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot16/slots/0/
[2025-02-24 18:45:32] + mv ATLAS.root_0 EVNT.43078917._002099.pool.root.1
[2025-02-24 18:45:32] mv: 'ATLAS.root_0' and 'EVNT.43078917._002099.pool.root.1' are the same file
[2025-02-24 18:45:32] + tar --strip-components=5 -xvf input.tar.gz
[2025-02-24 18:45:32] + umask 077
[2025-02-24 18:45:32] ++ date +%s
[2025-02-24 18:45:32] + ACCOUNTING_STARTTIME=1740418921
[2025-02-24 18:45:32] + echo 'Detecting resource accounting method available for the job.'
[2025-02-24 18:45:32] Detecting resource accounting method available for the job.
[2025-02-24 18:45:32] + JOB_ACCOUNTING=
[2025-02-24 18:45:32] + command -v arc-job-cgroup
[2025-02-24 18:45:32] + '[' -z '' ']'
[2025-02-24 18:45:32] + GNU_TIME=/usr/bin/time
[2025-02-24 18:45:32] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-02-24 18:45:32] Looking for /usr/bin/time tool for accounting measurements
[2025-02-24 18:45:32] + '[' '!' -z /usr/bin/time ']'
[2025-02-24 18:45:32] + /usr/bin/time --version
[2025-02-24 18:45:32] + echo 'GNU time found and will be used for job accounting.'
[2025-02-24 18:45:32] GNU time found and will be used for job accounting.
[2025-02-24 18:45:32] + JOB_ACCOUNTING=gnutime
[2025-02-24 18:45:32] + '[' -z gnutime ']'
[2025-02-24 18:45:32] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-24 18:45:32] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-24 18:45:32] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-21/BOINC_MCORE/6522039577.out
[2025-02-24 18:45:32] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-21/BOINC_MCORE/6522039577.out
[2025-02-24 18:45:32] + export PILOT_NOKILL=YES
[2025-02-24 18:45:32] + PILOT_NOKILL=YES
[2025-02-24 18:45:32] + export GRID_GLOBAL_JOBID=wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-24 18:45:32] + GRID_GLOBAL_JOBID=wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-24 18:45:32] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-24 18:45:32] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-24 18:45:32] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-24 18:45:32] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-24 18:45:32] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-02-24 18:45:32] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-02-24 18:45:32] ++ pwd
[2025-02-24 18:45:32] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot16/slots/0
[2025-02-24 18:45:32] + RUNTIME_JOB_STDIN=/dev/null
[2025-02-24 18:45:32] ++ pwd
[2025-02-24 18:45:32] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot16/slots/0/log.43078919._082345.job.log.1
[2025-02-24 18:45:32] ++ pwd
[2025-02-24 18:45:32] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot16/slots/0/log.43078919._082345.job.log.1
[2025-02-24 18:45:32] ++ pwd
[2025-02-24 18:45:32] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot16/slots/0.diag
[2025-02-24 18:45:32] + '[' '!' -z '' ']'
[2025-02-24 18:45:32] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-02-24 18:45:32] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-02-24 18:45:32] + RUNTIME_FRONTEND_SEES_NODE=
[2025-02-24 18:45:32] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-02-24 18:45:32] + '[' '!' -z '' ']'
[2025-02-24 18:45:32] + '[' -z yes ']'
[2025-02-24 18:45:32] ++ pwd
[2025-02-24 18:45:32] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag
[2025-02-24 18:45:32] + runtimeenvironments=
[2025-02-24 18:45:32] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-24 18:45:32] + RTE_function_0 1
[2025-02-24 18:45:32] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-24 18:45:32] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-24 18:45:32] + export BOINC_APP=ATLAS
[2025-02-24 18:45:32] + BOINC_APP=ATLAS
[2025-02-24 18:45:32] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-24 18:45:32] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-24 18:45:32] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-24 18:45:32] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-24 18:45:32] + '[' -z 1 ']'
[2025-02-24 18:45:32] + '[' 1 == 1 ']'
[2025-02-24 18:45:32] + shift
[2025-02-24 18:45:32] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2025-02-24 18:45:32] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-24 18:45:32] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2025-02-24 18:45:32] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot16/slots/0/
[2025-02-24 18:45:32] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot16/slots/0/
[2025-02-24 18:45:32] + '[' -e /scratch/boinc/var/slot16/slots/0/init_data.xml ']'
[2025-02-24 18:45:32] + grep '<use_http_proxy/>' /scratch/boinc/var/slot16/slots/0/init_data.xml
[2025-02-24 18:45:32] + '[' -e /scratch/boinc/var/slot16/slots/0/init_data.xml ']'
[2025-02-24 18:45:32] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot16/slots/0/init_data.xml
[2025-02-24 18:45:32] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2025-02-24 18:45:32] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-24 18:45:32] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2025-02-24 18:45:32] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-24 18:45:32] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-24 18:45:32] + '[' 0 -ne 0 ']'
[2025-02-24 18:45:32] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-02-24 18:45:32] + '[' -f /etc/os-release ']'
[2025-02-24 18:45:32] +++ cat /etc/os-release
[2025-02-24 18:45:32] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-02-24 18:45:32] +++ NAME='CentOS Linux'
[2025-02-24 18:45:32] +++ VERSION='7 (Core)'
[2025-02-24 18:45:32] +++ ID=centos
[2025-02-24 18:45:32] +++ ID_LIKE='rhel fedora'
[2025-02-24 18:45:32] +++ VERSION_ID=7
[2025-02-24 18:45:32] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-02-24 18:45:32] +++ ANSI_COLOR='0;31'
[2025-02-24 18:45:32] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-02-24 18:45:32] +++ HOME_URL=https://www.centos.org/
[2025-02-24 18:45:32] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-02-24 18:45:32] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-02-24 18:45:32] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-02-24 18:45:32] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-02-24 18:45:32] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-02-24 18:45:32] ++ echo 'CentOS Linux 7 (Core)'
[2025-02-24 18:45:32] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-02-24 18:45:32] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-02-24 18:45:32] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-02-24 18:45:32] + HOME=/scratch/boinc/var/slot16/slots/0
[2025-02-24 18:45:32] + export HOME
[2025-02-24 18:45:32] + cd /scratch/boinc/var/slot16/slots/0
[2025-02-24 18:45:32] + '[' '!' -z '' ']'
[2025-02-24 18:45:32] + '[' -z '' ']'
[2025-02-24 18:45:32] ++ /bin/hostname -f
[2025-02-24 18:45:32] + nodename=skurut12.grid.cesnet.cz
[2025-02-24 18:45:32] + echo nodename=skurut12.grid.cesnet.cz
[2025-02-24 18:45:32] + echo Processors=2
[2025-02-24 18:45:32] + echo Nodecount=1
[2025-02-24 18:45:32] + echo Benchmark=HEPSPEC:1.0
[2025-02-24 18:45:32] + executable=./runpilot2-wrapper.sh
[2025-02-24 18:45:32] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-02-24 18:45:32] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-02-24 18:45:32] ++ head -n 1
[2025-02-24 18:45:32] ++ tr -d '\0'
[2025-02-24 18:45:32] + line1='#!/bin/bash'
[2025-02-24 18:45:32] ++ echo '#!/bin/bash'
[2025-02-24 18:45:32] ++ sed -n 's/^#! *//p'
[2025-02-24 18:45:32] + shebang=/bin/bash
[2025-02-24 18:45:32] ++ echo /bin/bash
[2025-02-24 18:45:32] ++ awk '{print $1}'
[2025-02-24 18:45:32] + interpreter=/bin/bash
[2025-02-24 18:45:32] + '[' /bin/bash = /usr/bin/env ']'
[2025-02-24 18:45:32] + '[' x/bin/bash = x ']'
[2025-02-24 18:45:32] + type /bin/bash
[2025-02-24 18:45:32] + '[' xgnutime = xgnutime ']'
[2025-02-24 18:45:32] + /usr/bin/time -o /scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.9.4.15 -z -t --piloturl local --mute --container
[2025-02-24 18:45:32] + RESULT=1
[2025-02-24 18:45:32] + sed -i -e /nodename=/d /scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag
[2025-02-24 18:45:32] ++ grep domain_name init_data.xml
[2025-02-24 18:45:32] ++ awk -F '>' '{print $2}'
[2025-02-24 18:45:32] ++ sed -e 's# #_#g'
[2025-02-24 18:45:32] ++ awk -F '<' '{print $1}'
[2025-02-24 18:45:32] + hostname=skurut12.grid.cesnet.cz
[2025-02-24 18:45:32] ++ grep user_name init_data.xml
[2025-02-24 18:45:32] ++ awk -F '>' '{print $2}'
[2025-02-24 18:45:32] ++ awk -F '<' '{print $1}'
[2025-02-24 18:45:32] ++ sed -e 's# #_#g'
[2025-02-24 18:45:32] + username=praguelcg2
[2025-02-24 18:45:32] + nodename=praguelcg2@skurut12.grid.cesnet.cz
[2025-02-24 18:45:32] + echo nodename=praguelcg2@skurut12.grid.cesnet.cz
[2025-02-24 18:45:32] + '[' -n 4 ']'
[2025-02-24 18:45:32] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag
[2025-02-24 18:45:32] + echo exitcode=1
[2025-02-24 18:45:32] + runtimeenvironments=
[2025-02-24 18:45:32] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-24 18:45:32] + RTE_function_0 2
[2025-02-24 18:45:32] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-24 18:45:32] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-24 18:45:32] + export BOINC_APP=ATLAS
[2025-02-24 18:45:32] + BOINC_APP=ATLAS
[2025-02-24 18:45:32] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-24 18:45:32] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-24 18:45:32] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-24 18:45:32] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-24 18:45:32] + '[' -z 2 ']'
[2025-02-24 18:45:32] + '[' 2 == 1 ']'
[2025-02-24 18:45:32] + '[' 0 -ne 0 ']'
[2025-02-24 18:45:32] + echo 'zip all output files'
[2025-02-24 18:45:32] + flist='*.diag '
[2025-02-24 18:45:32] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-24 18:45:32] + '[' -e ./heartbeat.json ']'
[2025-02-24 18:45:32] + flist='*.diag  ./heartbeat.json'
[2025-02-24 18:45:32] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-24 18:45:32] + '[' -e ./output.list ']'
[2025-02-24 18:45:32] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-24 18:45:32] + '[' -e ./log.43078919._082345.job.log.1 ']'
[2025-02-24 18:45:32] + flist='*.diag  ./heartbeat.json ./log.43078919._082345.job.log.1'
[2025-02-24 18:45:32] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-24 18:45:32] + '[' -e ./log.43078919._082345.job.log.1 ']'
[2025-02-24 18:45:32] + flist='*.diag  ./heartbeat.json ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1'
[2025-02-24 18:45:32] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-24 18:45:32] + '[' -e ./gmlog/ ']'
[2025-02-24 18:45:32] + '[' -f output.list ']'
[2025-02-24 18:45:32] + tar cvf result.tar.gz wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag ./heartbeat.json ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1
[2025-02-24 18:45:32] + '[' xgnutime = xcgroup ']'
[2025-02-24 18:45:32] + '[' -n '' ']'
[2025-02-24 18:45:32] + '[' -n '' ']'
[2025-02-24 18:45:32] ++ date +%s
[2025-02-24 18:45:32] + ACCOUNTING_ENDTIME=1740419112
[2025-02-24 18:45:32] ++ date -d '1970-01-01 UTC 1740418921 seconds' +%Y%m%d%H%M%SZ
[2025-02-24 18:45:32] + echo LRMSStartTime=20250224184201Z
[2025-02-24 18:45:32] ++ date -d '1970-01-01 UTC 1740419112 seconds' +%Y%m%d%H%M%SZ
[2025-02-24 18:45:32] + echo LRMSEndTime=20250224184512Z
[2025-02-24 18:45:32] + echo walltime=191
[2025-02-24 18:45:32] + echo exitcode=1
[2025-02-24 18:45:32] + exit 1
[2025-02-24 18:45:32] ./log.43078919._082345.job.log.1
[2025-02-24 18:45:32] ./runtime_log.err
[2025-02-24 18:45:32] ./PanDA_Pilot-6522039577/prmon.log
[2025-02-24 18:45:32] ./PanDA_Pilot-6522039577/pilotlog.txt
[2025-02-24 18:45:32] ./PanDA_Pilot-6522039577/PoolFileCatalog.xml
[2025-02-24 18:45:32] ./PanDA_Pilot-6522039577/log.EVNTtoHITS
[2025-02-24 18:45:32] ./runtime_log
[2025-02-24 18:45:32] ./pilotlog.txt
[2025-02-24 18:45:32] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-02-24 18:45:32] ./pilot3/pilot/util/loggingsupport.py
[2025-02-24 18:45:32] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-02-24 18:45:32] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-02-24 18:45:32] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-02-24 18:45:32] ./pilot3/pilot/util/realtimelogger.py
19:17:58 (2040974): wrapper (7.7.26015): starting
19:17:58 (2040974): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 19:17:58] Arguments: --nthreads 4
[2025-02-24 19:17:58] Threads: 4
[2025-02-24 19:17:58] This job has been restarted, cleaning up previous attempt
[2025-02-24 19:17:58] Checking for CVMFS
[2025-02-24 19:17:58] No cvmfs_config command found, will try listing directly
[2025-02-24 19:17:58] CVMFS is ok
[2025-02-24 19:17:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 19:17:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 19:17:58] Further information can be found at the LHC@home message board.
[2025-02-24 19:17:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 19:17:58] Checking for apptainer binary...
[2025-02-24 19:17:58] which: no apptainer in ((null))
[2025-02-24 19:17:58] apptainer is not installed, using version from CVMFS
[2025-02-24 19:17:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 19:17:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-02-24 19:17:58] apptainer works
[2025-02-24 19:17:58] Set ATHENA_PROC_NUMBER=4
[2025-02-24 19:17:58] Set ATHENA_CORE_NUMBER=4
[2025-02-24 19:17:58] Starting ATLAS job with PandaID=6522039577
[2025-02-24 19:17:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:31:02 (4019545): wrapper (7.7.26015): starting
02:31:02 (4019545): wrapper: running run_atlas (--nthreads 4)
[2025-02-26 02:31:02] Arguments: --nthreads 4
[2025-02-26 02:31:02] Threads: 4
[2025-02-26 02:31:02] This job has been restarted, cleaning up previous attempt
[2025-02-26 02:31:02] Checking for CVMFS
[2025-02-26 02:31:02] No cvmfs_config command found, will try listing directly
[2025-02-26 02:31:02] CVMFS is ok
[2025-02-26 02:31:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 02:31:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 02:31:02] Further information can be found at the LHC@home message board.
[2025-02-26 02:31:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 02:31:02] Checking for apptainer binary...
[2025-02-26 02:31:02] which: no apptainer in ((null))
[2025-02-26 02:31:02] apptainer is not installed, using version from CVMFS
[2025-02-26 02:31:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 02:31:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-02-26 02:31:02] apptainer works
[2025-02-26 02:31:02] Set ATHENA_PROC_NUMBER=4
[2025-02-26 02:31:02] Set ATHENA_CORE_NUMBER=4
[2025-02-26 02:31:02] Starting ATLAS job with PandaID=6522039577
[2025-02-26 02:31:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 02:34:12] Job failed
[2025-02-26 02:34:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-02-26 02:34:12] ++ pwd
[2025-02-26 02:34:12] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot16/slots/0/
[2025-02-26 02:34:12] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot16/slots/0/
[2025-02-26 02:34:12] + mv ATLAS.root_0 EVNT.43078917._002099.pool.root.1
[2025-02-26 02:34:12] mv: 'ATLAS.root_0' and 'EVNT.43078917._002099.pool.root.1' are the same file
[2025-02-26 02:34:12] + tar --strip-components=5 -xvf input.tar.gz
[2025-02-26 02:34:12] + umask 077
[2025-02-26 02:34:12] ++ date +%s
[2025-02-26 02:34:12] + ACCOUNTING_STARTTIME=1740533462
[2025-02-26 02:34:12] + echo 'Detecting resource accounting method available for the job.'
[2025-02-26 02:34:12] Detecting resource accounting method available for the job.
[2025-02-26 02:34:12] + JOB_ACCOUNTING=
[2025-02-26 02:34:12] + command -v arc-job-cgroup
[2025-02-26 02:34:12] + '[' -z '' ']'
[2025-02-26 02:34:12] + GNU_TIME=/usr/bin/time
[2025-02-26 02:34:12] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-02-26 02:34:12] Looking for /usr/bin/time tool for accounting measurements
[2025-02-26 02:34:12] + '[' '!' -z /usr/bin/time ']'
[2025-02-26 02:34:12] + /usr/bin/time --version
[2025-02-26 02:34:12] + echo 'GNU time found and will be used for job accounting.'
[2025-02-26 02:34:12] GNU time found and will be used for job accounting.
[2025-02-26 02:34:12] + JOB_ACCOUNTING=gnutime
[2025-02-26 02:34:12] + '[' -z gnutime ']'
[2025-02-26 02:34:12] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-26 02:34:12] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-26 02:34:12] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-21/BOINC_MCORE/6522039577.out
[2025-02-26 02:34:12] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-21/BOINC_MCORE/6522039577.out
[2025-02-26 02:34:12] + export PILOT_NOKILL=YES
[2025-02-26 02:34:12] + PILOT_NOKILL=YES
[2025-02-26 02:34:12] + export GRID_GLOBAL_JOBID=wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-26 02:34:12] + GRID_GLOBAL_JOBID=wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-26 02:34:12] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-26 02:34:12] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m
[2025-02-26 02:34:12] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-26 02:34:12] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-26 02:34:12] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-02-26 02:34:12] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-02-26 02:34:12] ++ pwd
[2025-02-26 02:34:12] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot16/slots/0
[2025-02-26 02:34:12] + RUNTIME_JOB_STDIN=/dev/null
[2025-02-26 02:34:12] ++ pwd
[2025-02-26 02:34:12] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot16/slots/0/log.43078919._082345.job.log.1
[2025-02-26 02:34:12] ++ pwd
[2025-02-26 02:34:12] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot16/slots/0/log.43078919._082345.job.log.1
[2025-02-26 02:34:12] ++ pwd
[2025-02-26 02:34:12] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot16/slots/0.diag
[2025-02-26 02:34:12] + '[' '!' -z '' ']'
[2025-02-26 02:34:12] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-02-26 02:34:12] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-02-26 02:34:12] + RUNTIME_FRONTEND_SEES_NODE=
[2025-02-26 02:34:12] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-02-26 02:34:12] + '[' '!' -z '' ']'
[2025-02-26 02:34:12] + '[' -z yes ']'
[2025-02-26 02:34:12] ++ pwd
[2025-02-26 02:34:12] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag
[2025-02-26 02:34:12] + runtimeenvironments=
[2025-02-26 02:34:12] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-26 02:34:12] + RTE_function_0 1
[2025-02-26 02:34:12] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-26 02:34:12] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-26 02:34:12] + export BOINC_APP=ATLAS
[2025-02-26 02:34:12] + BOINC_APP=ATLAS
[2025-02-26 02:34:12] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-26 02:34:12] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-26 02:34:12] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-26 02:34:12] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-26 02:34:12] + '[' -z 1 ']'
[2025-02-26 02:34:12] + '[' 1 == 1 ']'
[2025-02-26 02:34:12] + shift
[2025-02-26 02:34:12] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2025-02-26 02:34:12] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-26 02:34:12] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2025-02-26 02:34:12] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot16/slots/0/
[2025-02-26 02:34:12] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot16/slots/0/
[2025-02-26 02:34:12] + '[' -e /scratch/boinc/var/slot16/slots/0/init_data.xml ']'
[2025-02-26 02:34:12] + grep '<use_http_proxy/>' /scratch/boinc/var/slot16/slots/0/init_data.xml
[2025-02-26 02:34:12] + '[' -e /scratch/boinc/var/slot16/slots/0/init_data.xml ']'
[2025-02-26 02:34:12] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot16/slots/0/init_data.xml
[2025-02-26 02:34:12] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2025-02-26 02:34:12] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-26 02:34:12] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2025-02-26 02:34:12] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-26 02:34:12] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-26 02:34:12] + '[' 0 -ne 0 ']'
[2025-02-26 02:34:12] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-02-26 02:34:12] + '[' -f /etc/os-release ']'
[2025-02-26 02:34:12] +++ cat /etc/os-release
[2025-02-26 02:34:12] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-02-26 02:34:12] +++ NAME='CentOS Linux'
[2025-02-26 02:34:12] +++ VERSION='7 (Core)'
[2025-02-26 02:34:12] +++ ID=centos
[2025-02-26 02:34:12] +++ ID_LIKE='rhel fedora'
[2025-02-26 02:34:12] +++ VERSION_ID=7
[2025-02-26 02:34:12] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-02-26 02:34:12] +++ ANSI_COLOR='0;31'
[2025-02-26 02:34:12] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-02-26 02:34:12] +++ HOME_URL=https://www.centos.org/
[2025-02-26 02:34:12] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-02-26 02:34:12] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-02-26 02:34:12] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-02-26 02:34:12] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-02-26 02:34:12] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-02-26 02:34:12] ++ echo 'CentOS Linux 7 (Core)'
[2025-02-26 02:34:12] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-02-26 02:34:12] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-02-26 02:34:12] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-02-26 02:34:12] + HOME=/scratch/boinc/var/slot16/slots/0
[2025-02-26 02:34:12] + export HOME
[2025-02-26 02:34:12] + cd /scratch/boinc/var/slot16/slots/0
[2025-02-26 02:34:12] + '[' '!' -z '' ']'
[2025-02-26 02:34:12] + '[' -z '' ']'
[2025-02-26 02:34:12] ++ /bin/hostname -f
[2025-02-26 02:34:12] + nodename=skurut12.grid.cesnet.cz
[2025-02-26 02:34:12] + echo nodename=skurut12.grid.cesnet.cz
[2025-02-26 02:34:12] + echo Processors=2
[2025-02-26 02:34:12] + echo Nodecount=1
[2025-02-26 02:34:12] + echo Benchmark=HEPSPEC:1.0
[2025-02-26 02:34:12] + executable=./runpilot2-wrapper.sh
[2025-02-26 02:34:12] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-02-26 02:34:12] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-02-26 02:34:12] ++ head -n 1
[2025-02-26 02:34:12] ++ tr -d '\0'
[2025-02-26 02:34:12] + line1='#!/bin/bash'
[2025-02-26 02:34:12] ++ echo '#!/bin/bash'
[2025-02-26 02:34:12] ++ sed -n 's/^#! *//p'
[2025-02-26 02:34:12] + shebang=/bin/bash
[2025-02-26 02:34:12] ++ echo /bin/bash
[2025-02-26 02:34:12] ++ awk '{print $1}'
[2025-02-26 02:34:12] + interpreter=/bin/bash
[2025-02-26 02:34:12] + '[' /bin/bash = /usr/bin/env ']'
[2025-02-26 02:34:12] + '[' x/bin/bash = x ']'
[2025-02-26 02:34:12] + type /bin/bash
[2025-02-26 02:34:12] + '[' xgnutime = xgnutime ']'
[2025-02-26 02:34:12] + /usr/bin/time -o /scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.9.4.15 -z -t --piloturl local --mute --container
[2025-02-26 02:34:12] + RESULT=1
[2025-02-26 02:34:12] + sed -i -e /nodename=/d /scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag
[2025-02-26 02:34:12] ++ grep domain_name init_data.xml
[2025-02-26 02:34:12] ++ awk -F '>' '{print $2}'
[2025-02-26 02:34:12] ++ awk -F '<' '{print $1}'
[2025-02-26 02:34:12] ++ sed -e 's# #_#g'
[2025-02-26 02:34:12] + hostname=skurut12.grid.cesnet.cz
[2025-02-26 02:34:12] ++ grep user_name init_data.xml
[2025-02-26 02:34:12] ++ awk -F '>' '{print $2}'
[2025-02-26 02:34:12] ++ awk -F '<' '{print $1}'
[2025-02-26 02:34:12] ++ sed -e 's# #_#g'
[2025-02-26 02:34:12] + username=praguelcg2
[2025-02-26 02:34:12] + nodename=praguelcg2@skurut12.grid.cesnet.cz
[2025-02-26 02:34:12] + echo nodename=praguelcg2@skurut12.grid.cesnet.cz
[2025-02-26 02:34:12] + '[' -n 4 ']'
[2025-02-26 02:34:12] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot16/slots/0/wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag
[2025-02-26 02:34:12] + echo exitcode=1
[2025-02-26 02:34:12] + runtimeenvironments=
[2025-02-26 02:34:12] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-26 02:34:12] + RTE_function_0 2
[2025-02-26 02:34:12] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-26 02:34:12] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-26 02:34:12] + export BOINC_APP=ATLAS
[2025-02-26 02:34:12] + BOINC_APP=ATLAS
[2025-02-26 02:34:12] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-26 02:34:12] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-26 02:34:12] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-26 02:34:12] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-26 02:34:12] + '[' -z 2 ']'
[2025-02-26 02:34:12] + '[' 2 == 1 ']'
[2025-02-26 02:34:12] + '[' 0 -ne 0 ']'
[2025-02-26 02:34:12] + echo 'zip all output files'
[2025-02-26 02:34:12] + flist='*.diag '
[2025-02-26 02:34:12] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-26 02:34:12] + '[' -e ./heartbeat.json ']'
[2025-02-26 02:34:12] + flist='*.diag  ./heartbeat.json'
[2025-02-26 02:34:12] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-26 02:34:12] + '[' -e ./output.list ']'
[2025-02-26 02:34:12] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-26 02:34:12] + '[' -e ./log.43078919._082345.job.log.1 ']'
[2025-02-26 02:34:12] + flist='*.diag  ./heartbeat.json ./log.43078919._082345.job.log.1'
[2025-02-26 02:34:12] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-26 02:34:12] + '[' -e ./log.43078919._082345.job.log.1 ']'
[2025-02-26 02:34:12] + flist='*.diag  ./heartbeat.json ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1'
[2025-02-26 02:34:12] + for f in ./heartbeat.json ./output.list ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1 ./gmlog/
[2025-02-26 02:34:12] + '[' -e ./gmlog/ ']'
[2025-02-26 02:34:12] + '[' -f output.list ']'
[2025-02-26 02:34:12] + tar cvf result.tar.gz wEVMDmq2e56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCdKDmuqok7m.diag ./heartbeat.json ./log.43078919._082345.job.log.1 ./log.43078919._082345.job.log.1
[2025-02-26 02:34:12] + '[' xgnutime = xcgroup ']'
[2025-02-26 02:34:12] + '[' -n '' ']'
[2025-02-26 02:34:12] + '[' -n '' ']'
[2025-02-26 02:34:12] ++ date +%s
[2025-02-26 02:34:12] + ACCOUNTING_ENDTIME=1740533652
[2025-02-26 02:34:12] ++ date -d '1970-01-01 UTC 1740533462 seconds' +%Y%m%d%H%M%SZ
[2025-02-26 02:34:12] + echo LRMSStartTime=20250226023102Z
[2025-02-26 02:34:12] ++ date -d '1970-01-01 UTC 1740533652 seconds' +%Y%m%d%H%M%SZ
[2025-02-26 02:34:12] + echo LRMSEndTime=20250226023412Z
[2025-02-26 02:34:12] + echo walltime=190
[2025-02-26 02:34:12] + echo exitcode=1
[2025-02-26 02:34:12] + exit 1
[2025-02-26 02:34:12] ./log.43078919._082345.job.log.1
[2025-02-26 02:34:12] ./runtime_log.err
[2025-02-26 02:34:12] ./PanDA_Pilot-6522039577/prmon.log
[2025-02-26 02:34:12] ./PanDA_Pilot-6522039577/pilotlog.txt
[2025-02-26 02:34:12] ./PanDA_Pilot-6522039577/PoolFileCatalog.xml
[2025-02-26 02:34:12] ./PanDA_Pilot-6522039577/log.EVNTtoHITS
[2025-02-26 02:34:12] ./runtime_log
[2025-02-26 02:34:12] ./pilotlog.txt
[2025-02-26 02:34:12] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-02-26 02:34:12] ./pilot3/pilot/util/loggingsupport.py
[2025-02-26 02:34:12] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-02-26 02:34:12] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-02-26 02:34:12] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-02-26 02:34:12] ./pilot3/pilot/util/realtimelogger.py
02:44:18 (4019545): run_atlas exited; CPU time 16.706010
02:44:18 (4019545): app exit status: 0x1
02:44:18 (4019545): called boinc_finish(195)

</stderr_txt>
]]>

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