Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:20:06 (54534): wrapper (7.7.26015): starting
12:20:06 (54534): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 12:20:06] Arguments: --nthreads 4
[2025-02-23 12:20:06] Threads: 4
[2025-02-23 12:20:06] Checking for CVMFS
[2025-02-23 12:20:06] No cvmfs_config command found, will try listing directly
[2025-02-23 12:20:06] CVMFS is ok
[2025-02-23 12:20:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 12:20:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 12:20:06] Further information can be found at the LHC@home message board.
[2025-02-23 12:20:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 12:20:06] Checking for apptainer binary...
[2025-02-23 12:20:06] which: no apptainer in ((null))
[2025-02-23 12:20:06] apptainer is not installed, using version from CVMFS
[2025-02-23 12:20:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 12:20:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2025-02-23 12:20:06] apptainer works
[2025-02-23 12:20:07] Set ATHENA_PROC_NUMBER=4
[2025-02-23 12:20:07] Set ATHENA_CORE_NUMBER=4
[2025-02-23 12:20:07] Starting ATLAS job with PandaID=6521943888
[2025-02-23 12:20:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 19:40:32]  *** The last 200 lines of the pilot log: ***
[2025-02-23 19:40:32] 2025-02-23 18:32:54,126 | INFO     | chi2: 3.868335379222083
[2025-02-23 19:40:32] 2025-02-23 18:32:54,126 | INFO     | model: linear, x: [1740309639.0, 1740309700.0, 1740309761.0, 1740309822.0, 1740309883.0, 1740309944.0, 1740310005.0, 1740310066.0, 1740310127.0, 1740310188.0, 1740
[2025-02-23 19:40:32] 2025-02-23 18:32:54,127 | INFO     | sum of square deviations: 22973323765.0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,132 | INFO     | sum of deviations: 172625357229.0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,132 | INFO     | mean x: 1740322418.5
[2025-02-23 19:40:32] 2025-02-23 18:32:54,132 | INFO     | mean y: 2359175.995238095
[2025-02-23 19:40:32] 2025-02-23 18:32:54,132 | INFO     | -- intersect: -13074711528.283836
[2025-02-23 19:40:32] 2025-02-23 18:32:54,132 | INFO     | intersect: -13074711528.283836
[2025-02-23 19:40:32] 2025-02-23 18:32:54,133 | INFO     | chi2: 3.8693123132937375
[2025-02-23 19:40:32] 2025-02-23 18:32:54,133 | INFO     | current chi2=3.8693123132937375 (change=-0.02525463735387892 %)
[2025-02-23 19:40:32] 2025-02-23 18:32:54,133 | INFO     | right removable region: 419
[2025-02-23 19:40:32] 2025-02-23 18:32:54,134 | INFO     | model: linear, x: [1740309944.0, 1740310005.0, 1740310066.0, 1740310127.0, 1740310188.0, 1740310249.0, 1740310310.0, 1740310371.0, 1740310432.0, 1740310493.0, 1740
[2025-02-23 19:40:32] 2025-02-23 18:32:54,134 | INFO     | sum of square deviations: 22973323765.0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,139 | INFO     | sum of deviations: 74576325066.00002
[2025-02-23 19:40:32] 2025-02-23 18:32:54,139 | INFO     | mean x: 1740322723.5
[2025-02-23 19:40:32] 2025-02-23 18:32:54,139 | INFO     | mean y: 2378015.9571428574
[2025-02-23 19:40:32] 2025-02-23 18:32:54,139 | INFO     | -- intersect: -5647081960.975475
[2025-02-23 19:40:32] 2025-02-23 18:32:54,139 | INFO     | intersect: -5647081960.975475
[2025-02-23 19:40:32] 2025-02-23 18:32:54,140 | INFO     | chi2: 1.4619777488531476
[2025-02-23 19:40:32] 2025-02-23 18:32:54,140 | INFO     | current chi2=1.4619777488531476 (change=62.206540914062394 %)
[2025-02-23 19:40:32] 2025-02-23 18:32:54,141 | INFO     | model: linear, x: [1740310249.0, 1740310310.0, 1740310371.0, 1740310432.0, 1740310493.0, 1740310554.0, 1740310615.0, 1740310676.0, 1740310737.0, 1740310798.0, 1740
[2025-02-23 19:40:32] 2025-02-23 18:32:54,141 | INFO     | sum of square deviations: 22162573680.0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,146 | INFO     | sum of deviations: -1805846013.0000072
[2025-02-23 19:40:32] 2025-02-23 18:32:54,146 | INFO     | mean x: 1740322876.0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,146 | INFO     | mean y: 2392383.192771084
[2025-02-23 19:40:32] 2025-02-23 18:32:54,147 | INFO     | -- intersect: 144196993.62903094
[2025-02-23 19:40:32] 2025-02-23 18:32:54,147 | INFO     | intersect: 144196993.62903094
[2025-02-23 19:40:32] 2025-02-23 18:32:54,147 | INFO     | chi2: 0.18101005440739396
[2025-02-23 19:40:32] 2025-02-23 18:32:54,148 | INFO     | current chi2=0.18101005440739396 (change=87.61882288910431 %)
[2025-02-23 19:40:32] 2025-02-23 18:32:54,148 | INFO     | model: linear, x: [1740310554.0, 1740310615.0, 1740310676.0, 1740310737.0, 1740310798.0, 1740310859.0, 1740310920.0, 1740310981.0, 1740311042.0, 1740311103.0, 1740
[2025-02-23 19:40:32] 2025-02-23 18:32:54,148 | INFO     | sum of square deviations: 21371126282.5
[2025-02-23 19:40:32] 2025-02-23 18:32:54,153 | INFO     | sum of deviations: -17776081034.500004
[2025-02-23 19:40:32] 2025-02-23 18:32:54,153 | INFO     | mean x: 1740323028.5
[2025-02-23 19:40:32] 2025-02-23 18:32:54,153 | INFO     | mean y: 2395446.4707317073
[2025-02-23 19:40:32] 2025-02-23 18:32:54,153 | INFO     | -- intersect: 1449961792.384605
[2025-02-23 19:40:32] 2025-02-23 18:32:54,154 | INFO     | intersect: 1449961792.384605
[2025-02-23 19:40:32] 2025-02-23 18:32:54,154 | INFO     | chi2: 0.09547663505776814
[2025-02-23 19:40:32] 2025-02-23 18:32:54,154 | INFO     | current chi2=0.09547663505776814 (change=47.253407900269615 %)
[2025-02-23 19:40:32] 2025-02-23 18:32:54,155 | INFO     | model: linear, x: [1740310859.0, 1740310920.0, 1740310981.0, 1740311042.0, 1740311103.0, 1740311164.0, 1740311225.0, 1740311286.0, 1740311347.0, 1740311408.0, 1740
[2025-02-23 19:40:32] 2025-02-23 18:32:54,155 | INFO     | sum of square deviations: 20598749010.0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,160 | INFO     | sum of deviations: -16363093778.999996
[2025-02-23 19:40:32] 2025-02-23 18:32:54,160 | INFO     | mean x: 1740323181.0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,160 | INFO     | mean y: 2395162.172839506
[2025-02-23 19:40:32] 2025-02-23 18:32:54,160 | INFO     | -- intersect: 1384861223.7111359
[2025-02-23 19:40:32] 2025-02-23 18:32:54,160 | INFO     | intersect: 1384861223.7111359
[2025-02-23 19:40:32] 2025-02-23 18:32:54,161 | INFO     | chi2: 0.09128176300049731
[2025-02-23 19:40:32] 2025-02-23 18:32:54,161 | INFO     | current chi2=0.09128176300049731 (change=4.393611122483235 %)
[2025-02-23 19:40:32] 2025-02-23 18:32:54,161 | INFO     | left removable region: 40
[2025-02-23 19:40:32] 2025-02-23 18:32:54,162 | INFO     | model: linear, x: [1740312079.0, 1740312140.0, 1740312201.0, 1740312262.0, 1740312323.0, 1740312384.0, 1740312445.0, 1740312506.0, 1740312567.0, 1740312628.0, 1740
[2025-02-23 19:40:32] 2025-02-23 18:32:54,162 | INFO     | sum of square deviations: 16880800230.0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,166 | INFO     | sum of deviations: 15600647215.000004
[2025-02-23 19:40:32] 2025-02-23 18:32:54,166 | INFO     | mean x: 1740323608.0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,166 | INFO     | mean y: 2388206.548812665
[2025-02-23 19:40:32] 2025-02-23 18:32:54,167 | INFO     | -- intersect: -1605958215.3283663
[2025-02-23 19:40:32] 2025-02-23 18:32:54,167 | INFO     | intersect: -1605958215.3283663
[2025-02-23 19:40:32] 2025-02-23 18:32:54,167 | INFO     | chi2: 0.027923947522631658
[2025-02-23 19:40:32] 2025-02-23 18:32:54,168 | INFO     | -- intersect: -1605958215.3283663
[2025-02-23 19:40:32] 2025-02-23 18:32:54,168 | INFO     | current memory leak: 0.92 B/s (using 379 data points, chi2=0.03)
[2025-02-23 19:40:32] 2025-02-23 18:32:54,169 | INFO     | ..............................
[2025-02-23 19:40:32] 2025-02-23 18:32:54,169 | INFO     | . Timing measurements:
[2025-02-23 19:40:32] 2025-02-23 18:32:54,169 | INFO     | . get job = 0 s
[2025-02-23 19:40:32] 2025-02-23 18:32:54,169 | INFO     | . initial setup = 1 s
[2025-02-23 19:40:32] 2025-02-23 18:32:54,169 | INFO     | . payload setup = 4 s
[2025-02-23 19:40:32] 2025-02-23 18:32:54,169 | INFO     | . stage-in = 0 s
[2025-02-23 19:40:32] 2025-02-23 18:32:54,169 | INFO     | . payload execution = 25928 s
[2025-02-23 19:40:32] 2025-02-23 18:32:54,169 | INFO     | . stage-out = 1 s
[2025-02-23 19:40:32] 2025-02-23 18:32:54,170 | INFO     | . log creation = 0 s
[2025-02-23 19:40:32] 2025-02-23 18:32:54,170 | INFO     | ..............................
[2025-02-23 19:40:32] 2025-02-23 18:32:54,279 | INFO     | 
[2025-02-23 19:40:32] 2025-02-23 18:32:54,279 | INFO     | job summary report
[2025-02-23 19:40:32] 2025-02-23 18:32:54,280 | INFO     | --------------------------------------------------
[2025-02-23 19:40:32] 2025-02-23 18:32:54,280 | INFO     | PanDA job id: 6521943888
[2025-02-23 19:40:32] 2025-02-23 18:32:54,280 | INFO     | task id: 43205094
[2025-02-23 19:40:32] 2025-02-23 18:32:54,280 | INFO     | errors: (none)
[2025-02-23 19:40:32] 2025-02-23 18:32:54,280 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 19:40:32] 2025-02-23 18:32:54,280 | INFO     | pilot state: finished 
[2025-02-23 19:40:32] 2025-02-23 18:32:54,280 | INFO     | transexitcode: 0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,280 | INFO     | exeerrorcode: 0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,281 | INFO     | exeerrordiag: 
[2025-02-23 19:40:32] 2025-02-23 18:32:54,281 | INFO     | exitcode: 0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,281 | INFO     | exitmsg: OK
[2025-02-23 19:40:32] 2025-02-23 18:32:54,281 | INFO     | cpuconsumptiontime: 98914 s
[2025-02-23 19:40:32] 2025-02-23 18:32:54,281 | INFO     | nevents: 400
[2025-02-23 19:40:32] 2025-02-23 18:32:54,281 | INFO     | neventsw: 0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,281 | INFO     | pid: 75884
[2025-02-23 19:40:32] 2025-02-23 18:32:54,281 | INFO     | pgrp: 75884
[2025-02-23 19:40:32] 2025-02-23 18:32:54,282 | INFO     | corecount: 4
[2025-02-23 19:40:32] 2025-02-23 18:32:54,282 | INFO     | event service: False
[2025-02-23 19:40:32] 2025-02-23 18:32:54,282 | INFO     | sizes: {0: 2383094, 1: 2383349, 5: 2383555, 12: 2383611, 25936: 2419534, 25939: 2428497, 25940: 2428681, 25944: 2428851}
[2025-02-23 19:40:32] 2025-02-23 18:32:54,282 | INFO     | --------------------------------------------------
[2025-02-23 19:40:32] 2025-02-23 18:32:54,282 | INFO     | 
[2025-02-23 19:40:32] 2025-02-23 18:32:54,282 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-02-23 19:40:32] 2025-02-23 18:32:54,301 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,302 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,302 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,302 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,302 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,302 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 19:40:32] 2025-02-23 18:32:54,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 19:40:32] 2025-02-23 18:32:54,304 | INFO     | job 6521943888 has completed (purged errors)
[2025-02-23 19:40:32] 2025-02-23 18:32:54,304 | INFO     | overall cleanup function is called
[2025-02-23 19:40:32] 2025-02-23 18:32:55,312 | INFO     | --- collectZombieJob: --- 10, [75884]
[2025-02-23 19:40:32] 2025-02-23 18:32:55,313 | INFO     | zombie collector waiting for pid 75884
[2025-02-23 19:40:32] 2025-02-23 18:32:55,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 19:40:32] 2025-02-23 18:32:55,313 | INFO     | collected zombie processes
[2025-02-23 19:40:32] 2025-02-23 18:32:55,313 | INFO     | will attempt to kill all subprocesses of pid=75884
[2025-02-23 19:40:32] 2025-02-23 18:32:55,421 | INFO     | process IDs to be killed: [75884] (in reverse order)
[2025-02-23 19:40:32] 2025-02-23 18:32:55,491 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 19:40:32] 2025-02-23 18:32:55,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 19:40:32] 2025-02-23 18:32:55,500 | INFO     | did not find any defunct processes belonging to 75884
[2025-02-23 19:40:32] 2025-02-23 18:32:55,508 | INFO     | did not find any defunct processes belonging to 75884
[2025-02-23 19:40:32] 2025-02-23 18:32:55,508 | INFO     | ready for new job
[2025-02-23 19:40:32] 2025-02-23 18:32:55,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 19:40:32] 2025-02-23 18:32:55,511 | INFO     | **************************************
[2025-02-23 19:40:32] 2025-02-23 18:32:55,512 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 19:40:32] 2025-02-23 18:32:55,512 | INFO     | **************************************
[2025-02-23 19:40:32] 2025-02-23 18:32:55,512 | INFO     | 
[2025-02-23 19:40:32] 2025-02-23 18:32:55,514 | INFO     | architecture information:
[2025-02-23 19:40:32] 2025-02-23 18:32:55,515 | INFO     | executing command: cat /etc/os-release
[2025-02-23 19:40:32] 2025-02-23 18:32:55,527 | INFO     | cat /etc/os-release:
[2025-02-23 19:40:32] NAME="CentOS Linux"
[2025-02-23 19:40:32] VERSION="7 (Core)"
[2025-02-23 19:40:32] ID="centos"
[2025-02-23 19:40:32] ID_LIKE="rhel fedora"
[2025-02-23 19:40:32] VERSION_ID="7"
[2025-02-23 19:40:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 19:40:32] ANSI_COLOR="0;31"
[2025-02-23 19:40:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 19:40:32] HOME_URL="https://www.centos.org/"
[2025-02-23 19:40:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 19:40:32] 
[2025-02-23 19:40:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 19:40:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 19:40:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 19:40:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 19:40:32] 
[2025-02-23 19:40:32] 2025-02-23 18:32:55,528 | INFO     | **************************************
[2025-02-23 19:40:32] 2025-02-23 18:32:56,031 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-02-23 19:40:32] 2025-02-23 18:32:56,045 | INFO     | sufficient remaining disk space (1634617786368 B)
[2025-02-23 19:40:32] 2025-02-23 18:32:56,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 19:40:32] 2025-02-23 18:32:56,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 19:40:32] 2025-02-23 18:32:56,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 19:40:32] 2025-02-23 18:32:56,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 19:40:32] 2025-02-23 18:32:56,046 | INFO     | aborting loop
[2025-02-23 19:40:32] 2025-02-23 18:32:56,369 | INFO     | all payload control threads have been joined
[2025-02-23 19:40:32] 2025-02-23 18:32:56,494 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 19:40:32] 2025-02-23 18:32:56,499 | INFO     | all data control threads have been joined
[2025-02-23 19:40:32] 2025-02-23 18:32:56,594 | INFO     | PID=60858 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-23 19:40:32] 2025-02-23 18:32:56,594 | INFO     | .. there are 5 such processes running
[2025-02-23 19:40:32] 2025-02-23 18:32:56,594 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 19:40:32] 2025-02-23 18:32:56,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 19:40:32] 2025-02-23 18:32:56,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 19:40:32] 2025-02-23 18:32:56,905 | INFO     | all job control threads have been joined
[2025-02-23 19:40:32] 2025-02-23 18:32:57,050 | INFO     | [job] retrieve thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:57,051 | INFO     | [job] queue monitor thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:57,051 | INFO     | [job] job monitor thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:57,122 | INFO     | [job] validate thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:57,122 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:57,123 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:57,147 | INFO     | [payload] validate_post thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:57,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:57,374 | INFO     | [payload] control thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:57,393 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 19:40:32] 2025-02-23 18:32:57,503 | INFO     | [data] control thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:57,911 | INFO     | [job] control thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:57,929 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:58,291 | INFO     | [payload] failed_post thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:58,357 | INFO     | [data] copytool_in thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:32:59,398 | INFO     | [data] copytool_out thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:33:00,500 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 19:40:32] 2025-02-23 18:33:01,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23215570126656)>', '<ExcThread(monitor, started 23215329990400)>']
[2025-02-23 19:40:32] 2025-02-23 18:33:01,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 19:40:32] 2025-02-23 18:33:01,617 | INFO     | [monitor] control thread has ended
[2025-02-23 19:40:32] 2025-02-23 18:33:06,577 | INFO     | all workflow threads have been joined
[2025-02-23 19:40:32] 2025-02-23 18:33:06,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 19:40:32] 2025-02-23 18:33:06,578 | INFO     | traces error code: 0
[2025-02-23 19:40:32] 2025-02-23 18:33:06,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 19:40:32] 2025-02-23 18:33:06,699 [wrapper] ==== pilot stdout END ====
[2025-02-23 19:40:32] 2025-02-23 18:33:06,701 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 19:40:32] 2025-02-23 18:33:06,704 [wrapper] pilotpid: 60858
[2025-02-23 19:40:32] 2025-02-23 18:33:06,706 [wrapper] Pilot exit status: 0
[2025-02-23 19:40:32] 2025-02-23 18:33:06,715 [wrapper] pandaids: 6521943888
[2025-02-23 19:40:32] 2025-02-23 18:33:06,764 [wrapper] cleanup supervisor_pilot  549350 60859
[2025-02-23 19:40:32] 2025-02-23 18:33:06,767 [wrapper] Test setup, not cleaning
[2025-02-23 19:40:32] 2025-02-23 18:33:06,772 [wrapper] apfmon messages muted
[2025-02-23 19:40:32] 2025-02-23 18:33:06,774 [wrapper] ==== wrapper stdout END ====
[2025-02-23 19:40:32] 2025-02-23 18:33:06,776 [wrapper] ==== wrapper stderr END ====
[2025-02-23 19:40:32]  *** Error codes and diagnostics ***
[2025-02-23 19:40:32]     "exeErrorCode": 0,
[2025-02-23 19:40:32]     "exeErrorDiag": "",
[2025-02-23 19:40:32]     "pilotErrorCode": 0,
[2025-02-23 19:40:32]     "pilotErrorDiag": "",
[2025-02-23 19:40:32]  *** Listing of results directory ***
[2025-02-23 19:40:32] total 662788
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc    491065 Feb 21 08:56 pilot3.tar.gz
[2025-02-23 19:40:32] -rwx------ 1 boinc boinc     35865 Feb 21 09:03 runpilot2-wrapper.sh
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc      5118 Feb 21 09:03 queuedata.json
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc       100 Feb 23 12:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 19:40:32] -rwxr-xr-x 1 boinc boinc      7986 Feb 23 12:20 run_atlas
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc       105 Feb 23 12:20 job.xml
[2025-02-23 19:40:32] -rw-r--r-- 2 boinc boinc 344153671 Feb 23 12:20 EVNT.43092757._001620.pool.root.1
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc      6420 Feb 23 12:20 init_data.xml
[2025-02-23 19:40:32] -rw-r--r-- 2 boinc boinc     17569 Feb 23 12:20 start_atlas.sh
[2025-02-23 19:40:32] drwxrwx--x 2 boinc boinc      4096 Feb 23 12:20 shared
[2025-02-23 19:40:32] -rw-r--r-- 2 boinc boinc    503555 Feb 23 12:20 input.tar.gz
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc         0 Feb 23 12:20 boinc_lockfile
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc      2548 Feb 23 12:20 pandaJob.out
[2025-02-23 19:40:32] -rw------- 1 boinc boinc       424 Feb 23 12:20 setup.sh.local
[2025-02-23 19:40:32] -rw------- 1 boinc boinc    987728 Feb 23 12:20 agis_schedconf.cvmfs.json
[2025-02-23 19:40:32] drwx------ 4 boinc boinc      4096 Feb 23 12:20 pilot3
[2025-02-23 19:40:32] -rw------- 1 boinc boinc 323784106 Feb 23 19:31 HITS.43205094._031170.pool.root.1
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc       531 Feb 23 19:32 boinc_task_state.xml
[2025-02-23 19:40:32] -rw------- 1 boinc boinc        95 Feb 23 19:32 pilot_heartbeat.json
[2025-02-23 19:40:32] -rw------- 1 boinc boinc      1051 Feb 23 19:32 memory_monitor_summary.json
[2025-02-23 19:40:32] -rw------- 1 boinc boinc   1582569 Feb 23 19:32 agis_ddmendpoints.agis.ALL.json
[2025-02-23 19:40:32] -rw------- 1 boinc boinc    498946 Feb 23 19:32 log.43205094._031170.job.log.tgz.1
[2025-02-23 19:40:32] -rw------- 1 boinc boinc      7745 Feb 23 19:32 heartbeat.json
[2025-02-23 19:40:32] -rw------- 1 boinc boinc      4618 Feb 23 19:33 pilotlog.txt
[2025-02-23 19:40:32] -rw------- 1 boinc boinc   2978497 Feb 23 19:33 log.43205094._031170.job.log.1
[2025-02-23 19:40:32] -rw------- 1 boinc boinc       357 Feb 23 19:33 output.list
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc       620 Feb 23 19:33 runtime_log
[2025-02-23 19:40:32] -rw------- 1 boinc boinc   3491840 Feb 23 19:33 result.tar.gz
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc     11424 Feb 23 19:33 runtime_log.err
[2025-02-23 19:40:32] -rw------- 1 boinc boinc       665 Feb 23 19:33 aiKLDmWBd56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmysrKDm1gyR5m.diag
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc        28 Feb 23 19:40 wrapper_checkpoint.txt
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc      8192 Feb 23 19:40 boinc_mmap_file
[2025-02-23 19:40:32] -rw-r--r-- 1 boinc boinc     21431 Feb 23 19:40 stderr.txt
[2025-02-23 19:40:32] HITS file was successfully produced:
[2025-02-23 19:40:32] -rw------- 1 boinc boinc 323784106 Feb 23 19:31 shared/HITS.pool.root.1
[2025-02-23 19:40:32]  *** Contents of shared directory: ***
[2025-02-23 19:40:32] total 656216
[2025-02-23 19:40:32] -rw-r--r-- 2 boinc boinc 344153671 Feb 23 12:20 ATLAS.root_0
[2025-02-23 19:40:32] -rw-r--r-- 2 boinc boinc     17569 Feb 23 12:20 start_atlas.sh
[2025-02-23 19:40:32] -rw-r--r-- 2 boinc boinc    503555 Feb 23 12:20 input.tar.gz
[2025-02-23 19:40:32] -rw------- 1 boinc boinc 323784106 Feb 23 19:31 HITS.pool.root.1
[2025-02-23 19:40:32] -rw------- 1 boinc boinc   3491840 Feb 23 19:33 result.tar.gz
19:40:34 (54534): run_atlas exited; CPU time 99028.819327
19:40:34 (54534): called boinc_finish(0)

</stderr_txt>
]]>

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