Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:40:47 (3592763): wrapper (7.7.26015): starting
04:40:47 (3592763): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 04:40:47] Arguments: --nthreads 4
[2025-02-23 04:40:47] Threads: 4
[2025-02-23 04:40:47] Checking for CVMFS
[2025-02-23 04:40:47] No cvmfs_config command found, will try listing directly
[2025-02-23 04:40:47] CVMFS is ok
[2025-02-23 04:40:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 04:40:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 04:40:47] Further information can be found at the LHC@home message board.
[2025-02-23 04:40:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 04:40:47] Checking for apptainer binary...
[2025-02-23 04:40:47] which: no apptainer in ((null))
[2025-02-23 04:40:47] apptainer is not installed, using version from CVMFS
[2025-02-23 04:40:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 04:40:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2025-02-23 04:40:47] apptainer works
[2025-02-23 04:40:47] Set ATHENA_PROC_NUMBER=4
[2025-02-23 04:40:47] Set ATHENA_CORE_NUMBER=4
[2025-02-23 04:40:47] Starting ATLAS job with PandaID=6521753626
[2025-02-23 04:40:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 12:19:54]  *** The last 200 lines of the pilot log: ***
[2025-02-23 12:19:54] 2025-02-23 11:18:29,446 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-23 12:19:54] 2025-02-23 11:18:29,446 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-23 12:19:54] 2025-02-23 11:18:29,455 | INFO     | fitting pss+swap vs Time
[2025-02-23 12:19:54] 2025-02-23 11:18:29,456 | INFO     | model: linear, x: [1740282081.0, 1740282142.0, 1740282203.0, 1740282264.0, 1740282325.0, 1740282386.0, 1740282447.0, 1740282508.0, 1740282569.0, 1740282630.0, 1740
[2025-02-23 12:19:54] 2025-02-23 11:18:29,456 | INFO     | sum of square deviations: 28256204212.5
[2025-02-23 12:19:54] 2025-02-23 11:18:29,462 | INFO     | sum of deviations: 184294903913.0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,462 | INFO     | mean x: 1740295775.5
[2025-02-23 12:19:54] 2025-02-23 11:18:29,463 | INFO     | mean y: 2350104.16
[2025-02-23 12:19:54] 2025-02-23 11:18:29,463 | INFO     | -- intersect: -11348347969.578035
[2025-02-23 12:19:54] 2025-02-23 11:18:29,463 | INFO     | intersect: -11348347969.578035
[2025-02-23 12:19:54] 2025-02-23 11:18:29,464 | INFO     | chi2: 4.578073929794328
[2025-02-23 12:19:54] 2025-02-23 11:18:29,464 | INFO     | model: linear, x: [1740282081.0, 1740282142.0, 1740282203.0, 1740282264.0, 1740282325.0, 1740282386.0, 1740282447.0, 1740282508.0, 1740282569.0, 1740282630.0, 1740
[2025-02-23 12:19:54] 2025-02-23 11:18:29,464 | INFO     | sum of square deviations: 27324754190.0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,470 | INFO     | sum of deviations: 208410853936.0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,470 | INFO     | mean x: 1740295623.0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,471 | INFO     | mean y: 2354013.5707865166
[2025-02-23 12:19:54] 2025-02-23 11:18:29,471 | INFO     | -- intersect: -13271196202.7839
[2025-02-23 12:19:54] 2025-02-23 11:18:29,471 | INFO     | intersect: -13271196202.7839
[2025-02-23 12:19:54] 2025-02-23 11:18:29,472 | INFO     | chi2: 3.921943010428941
[2025-02-23 12:19:54] 2025-02-23 11:18:29,472 | INFO     | current chi2=3.921943010428941 (change=14.332029788668432 %)
[2025-02-23 12:19:54] 2025-02-23 11:18:29,472 | INFO     | right removable region: 444
[2025-02-23 12:19:54] 2025-02-23 11:18:29,472 | INFO     | model: linear, x: [1740282386.0, 1740282447.0, 1740282508.0, 1740282569.0, 1740282630.0, 1740282691.0, 1740282752.0, 1740282813.0, 1740282874.0, 1740282935.0, 1740
[2025-02-23 12:19:54] 2025-02-23 11:18:29,473 | INFO     | sum of square deviations: 27324754190.0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,478 | INFO     | sum of deviations: 77554579428.0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,479 | INFO     | mean x: 1740295928.0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,479 | INFO     | mean y: 2367555.966292135
[2025-02-23 12:19:54] 2025-02-23 11:18:29,479 | INFO     | -- intersect: -4937033466.191667
[2025-02-23 12:19:54] 2025-02-23 11:18:29,479 | INFO     | intersect: -4937033466.191667
[2025-02-23 12:19:54] 2025-02-23 11:18:29,480 | INFO     | chi2: 2.1698910639354656
[2025-02-23 12:19:54] 2025-02-23 11:18:29,480 | INFO     | current chi2=2.1698910639354656 (change=52.6025333533015 %)
[2025-02-23 12:19:54] 2025-02-23 11:18:29,480 | INFO     | model: linear, x: [1740282691.0, 1740282752.0, 1740282813.0, 1740282874.0, 1740282935.0, 1740282996.0, 1740283057.0, 1740283118.0, 1740283179.0, 1740283240.0, 1740
[2025-02-23 12:19:54] 2025-02-23 11:18:29,481 | INFO     | sum of square deviations: 26414002230.0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,486 | INFO     | sum of deviations: -6178859915.5
[2025-02-23 12:19:54] 2025-02-23 11:18:29,487 | INFO     | mean x: 1740296080.5
[2025-02-23 12:19:54] 2025-02-23 11:18:29,487 | INFO     | mean y: 2381576.543181818
[2025-02-23 12:19:54] 2025-02-23 11:18:29,487 | INFO     | -- intersect: 409477994.5441737
[2025-02-23 12:19:54] 2025-02-23 11:18:29,487 | INFO     | intersect: 409477994.5441737
[2025-02-23 12:19:54] 2025-02-23 11:18:29,488 | INFO     | chi2: 0.8025125205574517
[2025-02-23 12:19:54] 2025-02-23 11:18:29,488 | INFO     | current chi2=0.8025125205574517 (change=63.01599956350071 %)
[2025-02-23 12:19:54] 2025-02-23 11:18:29,488 | INFO     | model: linear, x: [1740282996.0, 1740283057.0, 1740283118.0, 1740283179.0, 1740283240.0, 1740283301.0, 1740283362.0, 1740283423.0, 1740283484.0, 1740283545.0, 1740
[2025-02-23 12:19:54] 2025-02-23 11:18:29,489 | INFO     | sum of square deviations: 25523715770.0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,494 | INFO     | sum of deviations: -26189530587.0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,494 | INFO     | mean x: 1740296233.0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,495 | INFO     | mean y: 2384992.0068965517
[2025-02-23 12:19:54] 2025-02-23 11:18:29,495 | INFO     | -- intersect: 1788078808.5069685
[2025-02-23 12:19:54] 2025-02-23 11:18:29,495 | INFO     | intersect: 1788078808.5069685
[2025-02-23 12:19:54] 2025-02-23 11:18:29,496 | INFO     | chi2: 0.6973058857413004
[2025-02-23 12:19:54] 2025-02-23 11:18:29,496 | INFO     | current chi2=0.6973058857413004 (change=13.109656500196573 %)
[2025-02-23 12:19:54] 2025-02-23 11:18:29,496 | INFO     | left removable region: 30
[2025-02-23 12:19:54] 2025-02-23 11:18:29,496 | INFO     | model: linear, x: [1740283911.0, 1740283972.0, 1740284033.0, 1740284094.0, 1740284155.0, 1740284216.0, 1740284277.0, 1740284338.0, 1740284399.0, 1740284460.0, 1740
[2025-02-23 12:19:54] 2025-02-23 11:18:29,497 | INFO     | sum of square deviations: 22002747427.5
[2025-02-23 12:19:54] 2025-02-23 11:18:29,502 | INFO     | sum of deviations: 4309387029.000001
[2025-02-23 12:19:54] 2025-02-23 11:18:29,502 | INFO     | mean x: 1740296507.5
[2025-02-23 12:19:54] 2025-02-23 11:18:29,502 | INFO     | mean y: 2388497.0966183576
[2025-02-23 12:19:54] 2025-02-23 11:18:29,502 | INFO     | -- intersect: -338460354.654557
[2025-02-23 12:19:54] 2025-02-23 11:18:29,502 | INFO     | intersect: -338460354.654557
[2025-02-23 12:19:54] 2025-02-23 11:18:29,503 | INFO     | chi2: 0.013980978918772652
[2025-02-23 12:19:54] 2025-02-23 11:18:29,503 | INFO     | -- intersect: -338460354.654557
[2025-02-23 12:19:54] 2025-02-23 11:18:29,503 | INFO     | current memory leak: 0.20 B/s (using 414 data points, chi2=0.01)
[2025-02-23 12:19:54] 2025-02-23 11:18:29,504 | INFO     | ..............................
[2025-02-23 12:19:54] 2025-02-23 11:18:29,504 | INFO     | . Timing measurements:
[2025-02-23 12:19:54] 2025-02-23 11:18:29,504 | INFO     | . get job = 0 s
[2025-02-23 12:19:54] 2025-02-23 11:18:29,505 | INFO     | . initial setup = 1 s
[2025-02-23 12:19:54] 2025-02-23 11:18:29,505 | INFO     | . payload setup = 5 s
[2025-02-23 12:19:54] 2025-02-23 11:18:29,505 | INFO     | . stage-in = 0 s
[2025-02-23 12:19:54] 2025-02-23 11:18:29,505 | INFO     | . payload execution = 27422 s
[2025-02-23 12:19:54] 2025-02-23 11:18:29,505 | INFO     | . stage-out = 1 s
[2025-02-23 12:19:54] 2025-02-23 11:18:29,505 | INFO     | . log creation = 0 s
[2025-02-23 12:19:54] 2025-02-23 11:18:29,505 | INFO     | ..............................
[2025-02-23 12:19:54] 2025-02-23 11:18:29,859 | INFO     | 
[2025-02-23 12:19:54] 2025-02-23 11:18:29,859 | INFO     | job summary report
[2025-02-23 12:19:54] 2025-02-23 11:18:29,859 | INFO     | --------------------------------------------------
[2025-02-23 12:19:54] 2025-02-23 11:18:29,859 | INFO     | PanDA job id: 6521753626
[2025-02-23 12:19:54] 2025-02-23 11:18:29,859 | INFO     | task id: 43205094
[2025-02-23 12:19:54] 2025-02-23 11:18:29,860 | INFO     | errors: (none)
[2025-02-23 12:19:54] 2025-02-23 11:18:29,860 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 12:19:54] 2025-02-23 11:18:29,860 | INFO     | pilot state: finished 
[2025-02-23 12:19:54] 2025-02-23 11:18:29,860 | INFO     | transexitcode: 0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,860 | INFO     | exeerrorcode: 0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,860 | INFO     | exeerrordiag: 
[2025-02-23 12:19:54] 2025-02-23 11:18:29,860 | INFO     | exitcode: 0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,860 | INFO     | exitmsg: OK
[2025-02-23 12:19:54] 2025-02-23 11:18:29,860 | INFO     | cpuconsumptiontime: 104993 s
[2025-02-23 12:19:54] 2025-02-23 11:18:29,861 | INFO     | nevents: 400
[2025-02-23 12:19:54] 2025-02-23 11:18:29,861 | INFO     | neventsw: 0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,861 | INFO     | pid: 3616247
[2025-02-23 12:19:54] 2025-02-23 11:18:29,861 | INFO     | pgrp: 3616247
[2025-02-23 12:19:54] 2025-02-23 11:18:29,861 | INFO     | corecount: 4
[2025-02-23 12:19:54] 2025-02-23 11:18:29,861 | INFO     | event service: False
[2025-02-23 12:19:54] 2025-02-23 11:18:29,861 | INFO     | sizes: {0: 2383320, 4: 2383526, 11: 2383554, 27431: 2419927, 27433: 2428890, 27434: 2428946, 27438: 2429244}
[2025-02-23 12:19:54] 2025-02-23 11:18:29,861 | INFO     | --------------------------------------------------
[2025-02-23 12:19:54] 2025-02-23 11:18:29,861 | INFO     | 
[2025-02-23 12:19:54] 2025-02-23 11:18:29,862 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-02-23 12:19:54] 2025-02-23 11:18:29,878 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,879 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,879 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,881 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 12:19:54] 2025-02-23 11:18:29,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 12:19:54] 2025-02-23 11:18:29,881 | INFO     | job 6521753626 has completed (purged errors)
[2025-02-23 12:19:54] 2025-02-23 11:18:29,881 | INFO     | overall cleanup function is called
[2025-02-23 12:19:54] 2025-02-23 11:18:30,886 | INFO     | --- collectZombieJob: --- 10, [3616247]
[2025-02-23 12:19:54] 2025-02-23 11:18:30,886 | INFO     | zombie collector waiting for pid 3616247
[2025-02-23 12:19:54] 2025-02-23 11:18:30,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 12:19:54] 2025-02-23 11:18:30,886 | INFO     | collected zombie processes
[2025-02-23 12:19:54] 2025-02-23 11:18:30,887 | INFO     | will attempt to kill all subprocesses of pid=3616247
[2025-02-23 12:19:54] 2025-02-23 11:18:31,004 | INFO     | process IDs to be killed: [3616247] (in reverse order)
[2025-02-23 12:19:54] 2025-02-23 11:18:31,081 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 12:19:54] 2025-02-23 11:18:31,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 12:19:54] 2025-02-23 11:18:31,091 | INFO     | did not find any defunct processes belonging to 3616247
[2025-02-23 12:19:54] 2025-02-23 11:18:31,099 | INFO     | did not find any defunct processes belonging to 3616247
[2025-02-23 12:19:54] 2025-02-23 11:18:31,099 | INFO     | ready for new job
[2025-02-23 12:19:54] 2025-02-23 11:18:31,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 12:19:54] 2025-02-23 11:18:31,102 | INFO     | **************************************
[2025-02-23 12:19:54] 2025-02-23 11:18:31,102 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 12:19:54] 2025-02-23 11:18:31,102 | INFO     | **************************************
[2025-02-23 12:19:54] 2025-02-23 11:18:31,102 | INFO     | 
[2025-02-23 12:19:54] 2025-02-23 11:18:31,105 | INFO     | architecture information:
[2025-02-23 12:19:54] 2025-02-23 11:18:31,105 | INFO     | executing command: cat /etc/os-release
[2025-02-23 12:19:54] 2025-02-23 11:18:31,117 | INFO     | cat /etc/os-release:
[2025-02-23 12:19:54] NAME="CentOS Linux"
[2025-02-23 12:19:54] VERSION="7 (Core)"
[2025-02-23 12:19:54] ID="centos"
[2025-02-23 12:19:54] ID_LIKE="rhel fedora"
[2025-02-23 12:19:54] VERSION_ID="7"
[2025-02-23 12:19:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 12:19:54] ANSI_COLOR="0;31"
[2025-02-23 12:19:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 12:19:54] HOME_URL="https://www.centos.org/"
[2025-02-23 12:19:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 12:19:54] 
[2025-02-23 12:19:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 12:19:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 12:19:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 12:19:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 12:19:54] 
[2025-02-23 12:19:54] 2025-02-23 11:18:31,117 | INFO     | **************************************
[2025-02-23 12:19:54] 2025-02-23 11:18:31,619 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-02-23 12:19:54] 2025-02-23 11:18:31,634 | INFO     | sufficient remaining disk space (1633685602304 B)
[2025-02-23 12:19:54] 2025-02-23 11:18:31,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 12:19:54] 2025-02-23 11:18:31,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 12:19:54] 2025-02-23 11:18:31,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 12:19:54] 2025-02-23 11:18:31,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 12:19:54] 2025-02-23 11:18:31,635 | INFO     | aborting loop
[2025-02-23 12:19:54] 2025-02-23 11:18:31,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 12:19:54] 2025-02-23 11:18:32,061 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 12:19:54] 2025-02-23 11:18:32,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 12:19:54] 2025-02-23 11:18:32,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 12:19:54] 2025-02-23 11:18:32,075 | INFO     | all data control threads have been joined
[2025-02-23 12:19:54] 2025-02-23 11:18:32,182 | INFO     | all job control threads have been joined
[2025-02-23 12:19:54] 2025-02-23 11:18:32,477 | INFO     | all payload control threads have been joined
[2025-02-23 12:19:54] 2025-02-23 11:18:32,640 | INFO     | [job] retrieve thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:32,641 | INFO     | [job] job monitor thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:32,696 | INFO     | [data] copytool_in thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:32,963 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:33,080 | INFO     | [data] control thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:33,187 | INFO     | [job] control thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:33,452 | INFO     | [payload] failed_post thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:33,483 | INFO     | [payload] control thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:33,641 | INFO     | [data] copytool_out thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:33,668 | INFO     | [payload] validate_post thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:33,942 | INFO     | [job] validate thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:34,058 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:34,082 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:34,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 12:19:54] 2025-02-23 11:18:35,635 | INFO     | [job] queue monitor thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:35,905 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:42,215 | INFO     | job.realtimelogging is not enabled
[2025-02-23 12:19:54] 2025-02-23 11:18:43,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 12:19:54] 2025-02-23 11:18:44,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23233871750976)>', '<ExcThread(monitor, started 23233633937152)>']
[2025-02-23 12:19:54] 2025-02-23 11:18:45,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 12:19:54] 2025-02-23 11:18:45,118 | INFO     | [monitor] control thread has ended
[2025-02-23 12:19:54] 2025-02-23 11:18:49,825 | INFO     | all workflow threads have been joined
[2025-02-23 12:19:54] 2025-02-23 11:18:49,825 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 12:19:54] 2025-02-23 11:18:49,826 | INFO     | traces error code: 0
[2025-02-23 12:19:54] 2025-02-23 11:18:49,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 12:19:54] 2025-02-23 11:18:49,944 [wrapper] ==== pilot stdout END ====
[2025-02-23 12:19:54] 2025-02-23 11:18:49,947 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 12:19:54] 2025-02-23 11:18:49,949 [wrapper] pilotpid: 3598185
[2025-02-23 12:19:54] 2025-02-23 11:18:49,951 [wrapper] Pilot exit status: 0
[2025-02-23 12:19:54] 2025-02-23 11:18:49,960 [wrapper] pandaids: 6521753626
[2025-02-23 12:19:54] 2025-02-23 11:18:50,005 [wrapper] cleanup supervisor_pilot   40122 3598186
[2025-02-23 12:19:54] 2025-02-23 11:18:50,008 [wrapper] Test setup, not cleaning
[2025-02-23 12:19:54] 2025-02-23 11:18:50,013 [wrapper] apfmon messages muted
[2025-02-23 12:19:54] 2025-02-23 11:18:50,015 [wrapper] ==== wrapper stdout END ====
[2025-02-23 12:19:54] 2025-02-23 11:18:50,018 [wrapper] ==== wrapper stderr END ====
[2025-02-23 12:19:54]  *** Error codes and diagnostics ***
[2025-02-23 12:19:54]     "exeErrorCode": 0,
[2025-02-23 12:19:54]     "exeErrorDiag": "",
[2025-02-23 12:19:54]     "pilotErrorCode": 0,
[2025-02-23 12:19:54]     "pilotErrorDiag": "",
[2025-02-23 12:19:54]  *** Listing of results directory ***
[2025-02-23 12:19:54] total 670212
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc    491065 Feb 21 05:34 pilot3.tar.gz
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc      5118 Feb 21 05:46 queuedata.json
[2025-02-23 12:19:54] -rwx------ 1 boinc boinc     35865 Feb 21 05:48 runpilot2-wrapper.sh
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc       100 Feb 23 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 12:19:54] -rwxr-xr-x 1 boinc boinc      7986 Feb 23 04:40 run_atlas
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc       105 Feb 23 04:40 job.xml
[2025-02-23 12:19:54] -rw-r--r-- 2 boinc boinc 341062133 Feb 23 04:40 EVNT.43092757._001957.pool.root.1
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc      6420 Feb 23 04:40 init_data.xml
[2025-02-23 12:19:54] -rw-r--r-- 2 boinc boinc    503554 Feb 23 04:40 input.tar.gz
[2025-02-23 12:19:54] drwxrwx--x 2 boinc boinc      4096 Feb 23 04:40 shared
[2025-02-23 12:19:54] -rw-r--r-- 2 boinc boinc     17569 Feb 23 04:40 start_atlas.sh
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc         0 Feb 23 04:40 boinc_lockfile
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc      2547 Feb 23 04:40 pandaJob.out
[2025-02-23 12:19:54] -rw------- 1 boinc boinc       424 Feb 23 04:40 setup.sh.local
[2025-02-23 12:19:54] -rw------- 1 boinc boinc    987744 Feb 23 04:40 agis_schedconf.cvmfs.json
[2025-02-23 12:19:54] drwx------ 4 boinc boinc      4096 Feb 23 04:40 pilot3
[2025-02-23 12:19:54] -rw------- 1 boinc boinc 334013045 Feb 23 12:17 HITS.43205094._030485.pool.root.1
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc       532 Feb 23 12:17 boinc_task_state.xml
[2025-02-23 12:19:54] -rw------- 1 boinc boinc      1038 Feb 23 12:18 memory_monitor_summary.json
[2025-02-23 12:19:54] -rw------- 1 boinc boinc   1582569 Feb 23 12:18 agis_ddmendpoints.agis.ALL.json
[2025-02-23 12:19:54] -rw------- 1 boinc boinc    511507 Feb 23 12:18 log.43205094._030485.job.log.tgz.1
[2025-02-23 12:19:54] -rw------- 1 boinc boinc        95 Feb 23 12:18 pilot_heartbeat.json
[2025-02-23 12:19:54] -rw------- 1 boinc boinc      7749 Feb 23 12:18 heartbeat.json
[2025-02-23 12:19:54] -rw------- 1 boinc boinc      4298 Feb 23 12:18 pilotlog.txt
[2025-02-23 12:19:54] -rw------- 1 boinc boinc   3193584 Feb 23 12:18 log.43205094._030485.job.log.1
[2025-02-23 12:19:54] -rw------- 1 boinc boinc       357 Feb 23 12:18 output.list
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc       620 Feb 23 12:18 runtime_log
[2025-02-23 12:19:54] -rw------- 1 boinc boinc   3727360 Feb 23 12:18 result.tar.gz
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc     11424 Feb 23 12:18 runtime_log.err
[2025-02-23 12:19:54] -rw------- 1 boinc boinc       666 Feb 23 12:18 Gz0MDm68Z56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWbrKDmCJ36gm.diag
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc        29 Feb 23 12:19 wrapper_checkpoint.txt
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc      8192 Feb 23 12:19 boinc_mmap_file
[2025-02-23 12:19:54] -rw-r--r-- 1 boinc boinc     21253 Feb 23 12:19 stderr.txt
[2025-02-23 12:19:54] HITS file was successfully produced:
[2025-02-23 12:19:54] -rw------- 1 boinc boinc 334013045 Feb 23 12:17 shared/HITS.pool.root.1
[2025-02-23 12:19:54]  *** Contents of shared directory: ***
[2025-02-23 12:19:54] total 663420
[2025-02-23 12:19:54] -rw-r--r-- 2 boinc boinc 341062133 Feb 23 04:40 ATLAS.root_0
[2025-02-23 12:19:54] -rw-r--r-- 2 boinc boinc    503554 Feb 23 04:40 input.tar.gz
[2025-02-23 12:19:54] -rw-r--r-- 2 boinc boinc     17569 Feb 23 04:40 start_atlas.sh
[2025-02-23 12:19:54] -rw------- 1 boinc boinc 334013045 Feb 23 12:17 HITS.pool.root.1
[2025-02-23 12:19:54] -rw------- 1 boinc boinc   3727360 Feb 23 12:18 result.tar.gz
12:19:56 (3592763): run_atlas exited; CPU time 105130.942214
12:19:56 (3592763): called boinc_finish(0)

</stderr_txt>
]]>

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