Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:12:43 (1452982): wrapper (7.7.26015): starting
08:12:43 (1452982): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 08:12:43] Arguments: --nthreads 4
[2025-02-23 08:12:43] Threads: 4
[2025-02-23 08:12:43] Checking for CVMFS
[2025-02-23 08:12:43] No cvmfs_config command found, will try listing directly
[2025-02-23 08:12:43] CVMFS is ok
[2025-02-23 08:12:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 08:12:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 08:12:43] Further information can be found at the LHC@home message board.
[2025-02-23 08:12:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 08:12:43] Checking for apptainer binary...
[2025-02-23 08:12:43] which: no apptainer in ((null))
[2025-02-23 08:12:43] apptainer is not installed, using version from CVMFS
[2025-02-23 08:12:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 08:12:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-02-23 08:12:43] apptainer works
[2025-02-23 08:12:43] Set ATHENA_PROC_NUMBER=4
[2025-02-23 08:12:43] Set ATHENA_CORE_NUMBER=4
[2025-02-23 08:12:43] Starting ATLAS job with PandaID=6521687047
[2025-02-23 08:12:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 14:12:00]  *** The last 200 lines of the pilot log: ***
[2025-02-23 14:12:00] 2025-02-23 13:11:46,955 | INFO     | fitting pss+swap vs Time
[2025-02-23 14:12:00] 2025-02-23 13:11:46,956 | INFO     | model: linear, x: [1740294799.0, 1740294860.0, 1740294921.0, 1740294982.0, 1740295043.0, 1740295104.0, 1740295165.0, 1740295226.0, 1740295287.0, 1740295348.0, 1740
[2025-02-23 14:12:00] 2025-02-23 13:11:46,956 | INFO     | sum of square deviations: 13639518992.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,959 | INFO     | sum of deviations: 115320961160.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,959 | INFO     | mean x: 1740305535.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,959 | INFO     | mean y: 2345413.7677053823
[2025-02-23 14:12:00] 2025-02-23 13:11:46,959 | INFO     | -- intersect: -14711788356.344063
[2025-02-23 14:12:00] 2025-02-23 13:11:46,960 | INFO     | intersect: -14711788356.344063
[2025-02-23 14:12:00] 2025-02-23 13:11:46,960 | INFO     | chi2: 4.4664550134575505
[2025-02-23 14:12:00] 2025-02-23 13:11:46,960 | INFO     | model: linear, x: [1740294799.0, 1740294860.0, 1740294921.0, 1740294982.0, 1740295043.0, 1740295104.0, 1740295165.0, 1740295226.0, 1740295287.0, 1740295348.0, 1740
[2025-02-23 14:12:00] 2025-02-23 13:11:46,961 | INFO     | sum of square deviations: 13068103627.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,964 | INFO     | sum of deviations: 134018280390.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,964 | INFO     | mean x: 1740305382.5
[2025-02-23 14:12:00] 2025-02-23 13:11:46,964 | INFO     | mean y: 2350340.488505747
[2025-02-23 14:12:00] 2025-02-23 13:11:46,964 | INFO     | -- intersect: -17845130929.420406
[2025-02-23 14:12:00] 2025-02-23 13:11:46,964 | INFO     | intersect: -17845130929.420406
[2025-02-23 14:12:00] 2025-02-23 13:11:46,964 | INFO     | chi2: 3.8191874888547286
[2025-02-23 14:12:00] 2025-02-23 13:11:46,965 | INFO     | current chi2=3.8191874888547286 (change=14.491750675929508 %)
[2025-02-23 14:12:00] 2025-02-23 13:11:46,965 | INFO     | right removable region: 347
[2025-02-23 14:12:00] 2025-02-23 13:11:46,965 | INFO     | model: linear, x: [1740295104.0, 1740295165.0, 1740295226.0, 1740295287.0, 1740295348.0, 1740295409.0, 1740295470.0, 1740295531.0, 1740295592.0, 1740295653.0, 1740
[2025-02-23 14:12:00] 2025-02-23 13:11:46,966 | INFO     | sum of square deviations: 13068103627.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,969 | INFO     | sum of deviations: 34776471490.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,969 | INFO     | mean x: 1740305687.5
[2025-02-23 14:12:00] 2025-02-23 13:11:46,969 | INFO     | mean y: 2366871.9137931033
[2025-02-23 14:12:00] 2025-02-23 13:11:46,969 | INFO     | -- intersect: -4628885898.395188
[2025-02-23 14:12:00] 2025-02-23 13:11:46,969 | INFO     | intersect: -4628885898.395188
[2025-02-23 14:12:00] 2025-02-23 13:11:46,970 | INFO     | chi2: 2.16292931219709
[2025-02-23 14:12:00] 2025-02-23 13:11:46,970 | INFO     | current chi2=2.16292931219709 (change=51.57391475610691 %)
[2025-02-23 14:12:00] 2025-02-23 13:11:46,970 | INFO     | model: linear, x: [1740295409.0, 1740295470.0, 1740295531.0, 1740295592.0, 1740295653.0, 1740295714.0, 1740295775.0, 1740295836.0, 1740295897.0, 1740295958.0, 1740
[2025-02-23 14:12:00] 2025-02-23 13:11:46,970 | INFO     | sum of square deviations: 12512874612.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,973 | INFO     | sum of deviations: -28771633137.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,973 | INFO     | mean x: 1740305840.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,974 | INFO     | mean y: 2384326.134110787
[2025-02-23 14:12:00] 2025-02-23 13:11:46,974 | INFO     | -- intersect: 4003978102.7263813
[2025-02-23 14:12:00] 2025-02-23 13:11:46,974 | INFO     | intersect: 4003978102.7263813
[2025-02-23 14:12:00] 2025-02-23 13:11:46,974 | INFO     | chi2: 0.8485579904060853
[2025-02-23 14:12:00] 2025-02-23 13:11:46,974 | INFO     | current chi2=0.8485579904060853 (change=60.76811268768996 %)
[2025-02-23 14:12:00] 2025-02-23 13:11:46,975 | INFO     | model: linear, x: [1740295714.0, 1740295775.0, 1740295836.0, 1740295897.0, 1740295958.0, 1740296019.0, 1740296080.0, 1740296141.0, 1740296202.0, 1740296263.0, 1740
[2025-02-23 14:12:00] 2025-02-23 13:11:46,975 | INFO     | sum of square deviations: 11973599384.5
[2025-02-23 14:12:00] 2025-02-23 13:11:46,978 | INFO     | sum of deviations: -45003555200.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,978 | INFO     | mean x: 1740305992.5
[2025-02-23 14:12:00] 2025-02-23 13:11:46,978 | INFO     | mean y: 2388892.680473373
[2025-02-23 14:12:00] 2025-02-23 13:11:46,978 | INFO     | -- intersect: 6543442612.896874
[2025-02-23 14:12:00] 2025-02-23 13:11:46,978 | INFO     | intersect: 6543442612.896874
[2025-02-23 14:12:00] 2025-02-23 13:11:46,978 | INFO     | chi2: 0.7172422831438585
[2025-02-23 14:12:00] 2025-02-23 13:11:46,979 | INFO     | current chi2=0.7172422831438585 (change=15.475160065299063 %)
[2025-02-23 14:12:00] 2025-02-23 13:11:46,979 | INFO     | left removable region: 30
[2025-02-23 14:12:00] 2025-02-23 13:11:46,979 | INFO     | model: linear, x: [1740296629.0, 1740296690.0, 1740296751.0, 1740296812.0, 1740296873.0, 1740296934.0, 1740296995.0, 1740297056.0, 1740297117.0, 1740297178.0, 1740
[2025-02-23 14:12:00] 2025-02-23 13:11:46,980 | INFO     | sum of square deviations: 9877610318.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,982 | INFO     | sum of deviations: -15597007223.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,982 | INFO     | mean x: 1740306267.0
[2025-02-23 14:12:00] 2025-02-23 13:11:46,982 | INFO     | mean y: 2391785.3438485805
[2025-02-23 14:12:00] 2025-02-23 13:11:46,982 | INFO     | -- intersect: 2750381283.083738
[2025-02-23 14:12:00] 2025-02-23 13:11:46,982 | INFO     | intersect: 2750381283.083738
[2025-02-23 14:12:00] 2025-02-23 13:11:46,983 | INFO     | chi2: 0.038480361842223344
[2025-02-23 14:12:00] 2025-02-23 13:11:46,983 | INFO     | -- intersect: 2750381283.083738
[2025-02-23 14:12:00] 2025-02-23 13:11:46,983 | INFO     | current memory leak: -1.58 B/s (using 317 data points, chi2=0.04)
[2025-02-23 14:12:00] 2025-02-23 13:11:46,984 | INFO     | ..............................
[2025-02-23 14:12:00] 2025-02-23 13:11:46,984 | INFO     | . Timing measurements:
[2025-02-23 14:12:00] 2025-02-23 13:11:46,984 | INFO     | . get job = 0 s
[2025-02-23 14:12:00] 2025-02-23 13:11:46,984 | INFO     | . initial setup = 1 s
[2025-02-23 14:12:00] 2025-02-23 13:11:46,984 | INFO     | . payload setup = 5 s
[2025-02-23 14:12:00] 2025-02-23 13:11:46,984 | INFO     | . stage-in = 0 s
[2025-02-23 14:12:00] 2025-02-23 13:11:46,984 | INFO     | . payload execution = 21502 s
[2025-02-23 14:12:00] 2025-02-23 13:11:46,984 | INFO     | . stage-out = 1 s
[2025-02-23 14:12:00] 2025-02-23 13:11:46,984 | INFO     | . log creation = 0 s
[2025-02-23 14:12:00] 2025-02-23 13:11:46,985 | INFO     | ..............................
[2025-02-23 14:12:00] 2025-02-23 13:11:47,185 | INFO     | 
[2025-02-23 14:12:00] 2025-02-23 13:11:47,186 | INFO     | job summary report
[2025-02-23 14:12:00] 2025-02-23 13:11:47,186 | INFO     | --------------------------------------------------
[2025-02-23 14:12:00] 2025-02-23 13:11:47,186 | INFO     | PanDA job id: 6521687047
[2025-02-23 14:12:00] 2025-02-23 13:11:47,186 | INFO     | task id: 43205094
[2025-02-23 14:12:00] 2025-02-23 13:11:47,186 | INFO     | errors: (none)
[2025-02-23 14:12:00] 2025-02-23 13:11:47,186 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 14:12:00] 2025-02-23 13:11:47,186 | INFO     | pilot state: finished 
[2025-02-23 14:12:00] 2025-02-23 13:11:47,187 | INFO     | transexitcode: 0
[2025-02-23 14:12:00] 2025-02-23 13:11:47,187 | INFO     | exeerrorcode: 0
[2025-02-23 14:12:00] 2025-02-23 13:11:47,187 | INFO     | exeerrordiag: 
[2025-02-23 14:12:00] 2025-02-23 13:11:47,187 | INFO     | exitcode: 0
[2025-02-23 14:12:00] 2025-02-23 13:11:47,187 | INFO     | exitmsg: OK
[2025-02-23 14:12:00] 2025-02-23 13:11:47,187 | INFO     | cpuconsumptiontime: 82061 s
[2025-02-23 14:12:00] 2025-02-23 13:11:47,187 | INFO     | nevents: 400
[2025-02-23 14:12:00] 2025-02-23 13:11:47,187 | INFO     | neventsw: 0
[2025-02-23 14:12:00] 2025-02-23 13:11:47,187 | INFO     | pid: 1463642
[2025-02-23 14:12:00] 2025-02-23 13:11:47,187 | INFO     | pgrp: 1463642
[2025-02-23 14:12:00] 2025-02-23 13:11:47,187 | INFO     | corecount: 4
[2025-02-23 14:12:00] 2025-02-23 13:11:47,188 | INFO     | event service: False
[2025-02-23 14:12:00] 2025-02-23 13:11:47,188 | INFO     | sizes: {0: 2383320, 4: 2383526, 11: 2383554, 21511: 2417238, 21512: 2417237, 21513: 2426256, 21514: 2426440, 21518: 2426610}
[2025-02-23 14:12:00] 2025-02-23 13:11:47,188 | INFO     | --------------------------------------------------
[2025-02-23 14:12:00] 2025-02-23 13:11:47,188 | INFO     | 
[2025-02-23 14:12:00] 2025-02-23 13:11:47,188 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-02-23 14:12:00] 2025-02-23 13:11:47,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,209 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,209 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,209 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,211 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 14:12:00] 2025-02-23 13:11:47,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 14:12:00] 2025-02-23 13:11:47,211 | INFO     | job 6521687047 has completed (purged errors)
[2025-02-23 14:12:00] 2025-02-23 13:11:47,211 | INFO     | overall cleanup function is called
[2025-02-23 14:12:00] 2025-02-23 13:11:48,219 | INFO     | --- collectZombieJob: --- 10, [1463642]
[2025-02-23 14:12:00] 2025-02-23 13:11:48,219 | INFO     | zombie collector waiting for pid 1463642
[2025-02-23 14:12:00] 2025-02-23 13:11:48,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 14:12:00] 2025-02-23 13:11:48,219 | INFO     | collected zombie processes
[2025-02-23 14:12:00] 2025-02-23 13:11:48,219 | INFO     | will attempt to kill all subprocesses of pid=1463642
[2025-02-23 14:12:00] 2025-02-23 13:11:48,371 | INFO     | process IDs to be killed: [1463642] (in reverse order)
[2025-02-23 14:12:00] 2025-02-23 13:11:48,474 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 14:12:00] 2025-02-23 13:11:48,475 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 14:12:00] 2025-02-23 13:11:48,484 | INFO     | did not find any defunct processes belonging to 1463642
[2025-02-23 14:12:00] 2025-02-23 13:11:48,493 | INFO     | did not find any defunct processes belonging to 1463642
[2025-02-23 14:12:00] 2025-02-23 13:11:48,494 | INFO     | ready for new job
[2025-02-23 14:12:00] 2025-02-23 13:11:48,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 14:12:00] 2025-02-23 13:11:48,496 | INFO     | **************************************
[2025-02-23 14:12:00] 2025-02-23 13:11:48,496 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 14:12:00] 2025-02-23 13:11:48,497 | INFO     | **************************************
[2025-02-23 14:12:00] 2025-02-23 13:11:48,497 | INFO     | 
[2025-02-23 14:12:00] 2025-02-23 13:11:48,500 | INFO     | architecture information:
[2025-02-23 14:12:00] 2025-02-23 13:11:48,501 | INFO     | executing command: cat /etc/os-release
[2025-02-23 14:12:00] 2025-02-23 13:11:48,514 | INFO     | cat /etc/os-release:
[2025-02-23 14:12:00] NAME="CentOS Linux"
[2025-02-23 14:12:00] VERSION="7 (Core)"
[2025-02-23 14:12:00] ID="centos"
[2025-02-23 14:12:00] ID_LIKE="rhel fedora"
[2025-02-23 14:12:00] VERSION_ID="7"
[2025-02-23 14:12:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 14:12:00] ANSI_COLOR="0;31"
[2025-02-23 14:12:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 14:12:00] HOME_URL="https://www.centos.org/"
[2025-02-23 14:12:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 14:12:00] 
[2025-02-23 14:12:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 14:12:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 14:12:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 14:12:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 14:12:00] 
[2025-02-23 14:12:00] 2025-02-23 13:11:48,514 | INFO     | **************************************
[2025-02-23 14:12:00] 2025-02-23 13:11:49,017 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-02-23 14:12:00] 2025-02-23 13:11:49,034 | INFO     | sufficient remaining disk space (634379042816 B)
[2025-02-23 14:12:00] 2025-02-23 13:11:49,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 14:12:00] 2025-02-23 13:11:49,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 14:12:00] 2025-02-23 13:11:49,035 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-23 14:12:00] 2025-02-23 13:11:49,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 14:12:00] 2025-02-23 13:11:49,035 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 14:12:00] 2025-02-23 13:11:49,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 14:12:00] 2025-02-23 13:11:49,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 14:12:00] 2025-02-23 13:11:49,158 | INFO     | all job control threads have been joined
[2025-02-23 14:12:00] 2025-02-23 13:11:49,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 14:12:00] 2025-02-23 13:11:49,317 | INFO     | all payload control threads have been joined
[2025-02-23 14:12:00] 2025-02-23 13:11:49,325 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-23 14:12:00] 2025-02-23 13:11:49,325 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-23 14:12:00] 2025-02-23 13:11:49,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 14:12:00] 2025-02-23 13:11:49,325 | INFO     | will abort loop
[2025-02-23 14:12:00] 2025-02-23 13:11:49,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 14:12:00] 2025-02-23 13:11:49,954 | INFO     | all data control threads have been joined
[2025-02-23 14:12:00] 2025-02-23 13:11:50,040 | INFO     | [job] retrieve thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:50,041 | INFO     | [job] queue monitor thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:50,145 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:50,163 | INFO     | [job] control thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:50,222 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:50,322 | INFO     | [payload] control thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:50,331 | INFO     | [job] job monitor thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:50,515 | INFO     | [data] copytool_in thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:50,643 | INFO     | [payload] failed_post thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:50,802 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:50,960 | INFO     | [data] control thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:51,105 | INFO     | [payload] validate_post thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:51,290 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:51,362 | INFO     | [job] validate thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:51,768 | INFO     | [data] copytool_out thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:53,271 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 14:12:00] 2025-02-23 13:11:55,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23289939949376)>', '<ExcThread(monitor, started 23289703393024)>']
[2025-02-23 14:12:00] 2025-02-23 13:11:56,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 14:12:00] 2025-02-23 13:11:56,072 | INFO     | [monitor] control thread has ended
[2025-02-23 14:12:00] 2025-02-23 13:12:00,254 | INFO     | all workflow threads have been joined
[2025-02-23 14:12:00] 2025-02-23 13:12:00,254 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 14:12:00] 2025-02-23 13:12:00,254 | INFO     | traces error code: 0
[2025-02-23 14:12:00] 2025-02-23 13:12:00,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 14:12:00] 2025-02-23 13:12:00,384 [wrapper] ==== pilot stdout END ====
[2025-02-23 14:12:00] 2025-02-23 13:12:00,387 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 14:12:00] 2025-02-23 13:12:00,389 [wrapper] pilotpid: 1456699
[2025-02-23 14:12:00] 2025-02-23 13:12:00,392 [wrapper] Pilot exit status: 0
[2025-02-23 14:12:00] 2025-02-23 13:12:00,400 [wrapper] pandaids: 6521687047
[2025-02-23 14:12:00] 2025-02-23 13:12:00,461 [wrapper] cleanup supervisor_pilot 2132628 1456700
[2025-02-23 14:12:00] 2025-02-23 13:12:00,463 [wrapper] Test setup, not cleaning
[2025-02-23 14:12:00] 2025-02-23 13:12:00,468 [wrapper] apfmon messages muted
[2025-02-23 14:12:00] 2025-02-23 13:12:00,471 [wrapper] ==== wrapper stdout END ====
[2025-02-23 14:12:00] 2025-02-23 13:12:00,473 [wrapper] ==== wrapper stderr END ====
[2025-02-23 14:12:00]  *** Error codes and diagnostics ***
[2025-02-23 14:12:00]     "exeErrorCode": 0,
[2025-02-23 14:12:00]     "exeErrorDiag": "",
[2025-02-23 14:12:00]     "pilotErrorCode": 0,
[2025-02-23 14:12:00]     "pilotErrorDiag": "",
[2025-02-23 14:12:00]  *** Listing of results directory ***
[2025-02-23 14:12:00] total 667976
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc    491065 Feb 21 03:55 pilot3.tar.gz
[2025-02-23 14:12:00] -rwx------ 1 boinc boinc     35865 Feb 21 04:05 runpilot2-wrapper.sh
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc      5118 Feb 21 04:05 queuedata.json
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc       100 Feb 23 07:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 14:12:00] -rwxr-xr-x 1 boinc boinc      7986 Feb 23 07:17 run_atlas
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc       105 Feb 23 07:17 job.xml
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc      6636 Feb 23 08:12 init_data.xml
[2025-02-23 14:12:00] -rw-r--r-- 2 boinc boinc 343064165 Feb 23 08:12 EVNT.43092757._001927.pool.root.1
[2025-02-23 14:12:00] drwxrwx--x 2 boinc boinc      4096 Feb 23 08:12 shared
[2025-02-23 14:12:00] -rw-r--r-- 2 boinc boinc    503552 Feb 23 08:12 input.tar.gz
[2025-02-23 14:12:00] -rw-r--r-- 2 boinc boinc     17569 Feb 23 08:12 start_atlas.sh
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc         0 Feb 23 08:12 boinc_lockfile
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc      2547 Feb 23 08:12 pandaJob.out
[2025-02-23 14:12:00] -rw------- 1 boinc boinc       424 Feb 23 08:12 setup.sh.local
[2025-02-23 14:12:00] -rw------- 1 boinc boinc    987744 Feb 23 08:12 agis_schedconf.cvmfs.json
[2025-02-23 14:12:00] drwx------ 4 boinc boinc      4096 Feb 23 08:12 pilot3
[2025-02-23 14:12:00] -rw------- 1 boinc boinc 331563678 Feb 23 14:10 HITS.43205094._029602.pool.root.1
[2025-02-23 14:12:00] -rw------- 1 boinc boinc        95 Feb 23 14:10 pilot_heartbeat.json
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc       532 Feb 23 14:11 boinc_task_state.xml
[2025-02-23 14:12:00] -rw------- 1 boinc boinc      1035 Feb 23 14:11 memory_monitor_summary.json
[2025-02-23 14:12:00] -rw------- 1 boinc boinc   1582569 Feb 23 14:11 agis_ddmendpoints.agis.ALL.json
[2025-02-23 14:12:00] -rw------- 1 boinc boinc    426575 Feb 23 14:11 log.43205094._029602.job.log.tgz.1
[2025-02-23 14:12:00] -rw------- 1 boinc boinc      7739 Feb 23 14:11 heartbeat.json
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc      8192 Feb 23 14:11 boinc_mmap_file
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc        28 Feb 23 14:11 wrapper_checkpoint.txt
[2025-02-23 14:12:00] -rw------- 1 boinc boinc      4534 Feb 23 14:12 pilotlog.txt
[2025-02-23 14:12:00] -rw------- 1 boinc boinc   2357849 Feb 23 14:12 log.43205094._029602.job.log.1
[2025-02-23 14:12:00] -rw------- 1 boinc boinc       357 Feb 23 14:12 output.list
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc       620 Feb 23 14:12 runtime_log
[2025-02-23 14:12:00] -rw------- 1 boinc boinc   2805760 Feb 23 14:12 result.tar.gz
[2025-02-23 14:12:00] -rw------- 1 boinc boinc       665 Feb 23 14:12 UkwKDmmWY56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmIocKDmJYtpRo.diag
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc     11424 Feb 23 14:12 runtime_log.err
[2025-02-23 14:12:00] -rw-r--r-- 1 boinc boinc     21355 Feb 23 14:12 stderr.txt
[2025-02-23 14:12:00] HITS file was successfully produced:
[2025-02-23 14:12:00] -rw------- 1 boinc boinc 331563678 Feb 23 14:10 shared/HITS.pool.root.1
[2025-02-23 14:12:00]  *** Contents of shared directory: ***
[2025-02-23 14:12:00] total 662080
[2025-02-23 14:12:00] -rw-r--r-- 2 boinc boinc 343064165 Feb 23 08:12 ATLAS.root_0
[2025-02-23 14:12:00] -rw-r--r-- 2 boinc boinc    503552 Feb 23 08:12 input.tar.gz
[2025-02-23 14:12:00] -rw-r--r-- 2 boinc boinc     17569 Feb 23 08:12 start_atlas.sh
[2025-02-23 14:12:00] -rw------- 1 boinc boinc 331563678 Feb 23 14:10 HITS.pool.root.1
[2025-02-23 14:12:00] -rw------- 1 boinc boinc   2805760 Feb 23 14:12 result.tar.gz
14:12:01 (1452982): run_atlas exited; CPU time 82151.663801
14:12:01 (1452982): called boinc_finish(0)

</stderr_txt>
]]>

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