Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:54:38 (3205835): wrapper (7.7.26015): starting
09:54:38 (3205835): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 09:54:38] Arguments: --nthreads 4
[2025-02-22 09:54:38] Threads: 4
[2025-02-22 09:54:38] Checking for CVMFS
[2025-02-22 09:54:38] No cvmfs_config command found, will try listing directly
[2025-02-22 09:54:38] CVMFS is ok
[2025-02-22 09:54:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 09:54:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 09:54:38] Further information can be found at the LHC@home message board.
[2025-02-22 09:54:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 09:54:38] Checking for apptainer binary...
[2025-02-22 09:54:38] which: no apptainer in ((null))
[2025-02-22 09:54:38] apptainer is not installed, using version from CVMFS
[2025-02-22 09:54:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 09:54:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-02-22 09:54:38] apptainer works
[2025-02-22 09:54:38] Set ATHENA_PROC_NUMBER=4
[2025-02-22 09:54:38] Set ATHENA_CORE_NUMBER=4
[2025-02-22 09:54:38] Starting ATLAS job with PandaID=6520835623
[2025-02-22 09:54:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 16:51:20]  *** The last 200 lines of the pilot log: ***
[2025-02-22 16:51:20] 2025-02-22 15:51:08,346 | INFO     | chi2: 0.08981970215222433
[2025-02-22 16:51:20] 2025-02-22 15:51:08,346 | INFO     | current chi2=0.08981970215222433 (change=93.8477080014783 %)
[2025-02-22 16:51:20] 2025-02-22 15:51:08,347 | INFO     | model: linear, x: [1740215429.0, 1740215490.0, 1740215551.0, 1740215612.0, 1740215673.0, 1740215734.0, 1740215795.0, 1740215856.0, 1740215917.0, 1740215978.0, 1740
[2025-02-22 16:51:20] 2025-02-22 15:51:08,348 | INFO     | sum of square deviations: 18965499782.5
[2025-02-22 16:51:20] 2025-02-22 15:51:08,351 | INFO     | sum of deviations: 27670522655.500004
[2025-02-22 16:51:20] 2025-02-22 15:51:08,352 | INFO     | mean x: 1740227415.5
[2025-02-22 16:51:20] 2025-02-22 15:51:08,352 | INFO     | mean y: 2379884.347715736
[2025-02-22 16:51:20] 2025-02-22 15:51:08,352 | INFO     | -- intersect: -2536598928.683465
[2025-02-22 16:51:20] 2025-02-22 15:51:08,352 | INFO     | intersect: -2536598928.683465
[2025-02-22 16:51:20] 2025-02-22 15:51:08,352 | INFO     | chi2: 0.009332137679618267
[2025-02-22 16:51:20] 2025-02-22 15:51:08,353 | INFO     | current chi2=0.009332137679618267 (change=89.61014403743805 %)
[2025-02-22 16:51:20] 2025-02-22 15:51:08,353 | INFO     | model: linear, x: [1740215734.0, 1740215795.0, 1740215856.0, 1740215917.0, 1740215978.0, 1740216039.0, 1740216100.0, 1740216161.0, 1740216222.0, 1740216283.0, 1740
[2025-02-22 16:51:20] 2025-02-22 15:51:08,353 | INFO     | sum of square deviations: 18252584090.0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,357 | INFO     | sum of deviations: 25063039378.000004
[2025-02-22 16:51:20] 2025-02-22 15:51:08,357 | INFO     | mean x: 1740227568.0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,357 | INFO     | mean y: 2380442.560411311
[2025-02-22 16:51:20] 2025-02-22 15:51:08,357 | INFO     | -- intersect: -2387165708.735538
[2025-02-22 16:51:20] 2025-02-22 15:51:08,357 | INFO     | intersect: -2387165708.735538
[2025-02-22 16:51:20] 2025-02-22 15:51:08,358 | INFO     | chi2: 0.0056890275568599125
[2025-02-22 16:51:20] 2025-02-22 15:51:08,358 | INFO     | current chi2=0.0056890275568599125 (change=39.03832377778825 %)
[2025-02-22 16:51:20] 2025-02-22 15:51:08,359 | INFO     | model: linear, x: [1740216039.0, 1740216100.0, 1740216161.0, 1740216222.0, 1740216283.0, 1740216344.0, 1740216405.0, 1740216466.0, 1740216527.0, 1740216588.0, 1740
[2025-02-22 16:51:20] 2025-02-22 15:51:08,359 | INFO     | sum of square deviations: 17557761760.0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,363 | INFO     | sum of deviations: 21590217359.499992
[2025-02-22 16:51:20] 2025-02-22 15:51:08,363 | INFO     | mean x: 1740227720.5
[2025-02-22 16:51:20] 2025-02-22 15:51:08,363 | INFO     | mean y: 2381204.7994791665
[2025-02-22 16:51:20] 2025-02-22 15:51:08,363 | INFO     | -- intersect: -2137521093.352116
[2025-02-22 16:51:20] 2025-02-22 15:51:08,363 | INFO     | intersect: -2137521093.352116
[2025-02-22 16:51:20] 2025-02-22 15:51:08,364 | INFO     | chi2: 0.003989494584177514
[2025-02-22 16:51:20] 2025-02-22 15:51:08,364 | INFO     | current chi2=0.003989494584177514 (change=29.87387485288372 %)
[2025-02-22 16:51:20] 2025-02-22 15:51:08,364 | INFO     | model: linear, x: [1740216344.0, 1740216405.0, 1740216466.0, 1740216527.0, 1740216588.0, 1740216649.0, 1740216710.0, 1740216771.0, 1740216832.0, 1740216893.0, 1740
[2025-02-22 16:51:20] 2025-02-22 15:51:08,364 | INFO     | sum of square deviations: 16880800230.0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,368 | INFO     | sum of deviations: 18778346445.0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,368 | INFO     | mean x: 1740227873.0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,368 | INFO     | mean y: 2381837.7625329816
[2025-02-22 16:51:20] 2025-02-22 15:51:08,368 | INFO     | -- intersect: -1933462520.751001
[2025-02-22 16:51:20] 2025-02-22 15:51:08,368 | INFO     | intersect: -1933462520.751001
[2025-02-22 16:51:20] 2025-02-22 15:51:08,369 | INFO     | chi2: 0.0028861240427348884
[2025-02-22 16:51:20] 2025-02-22 15:51:08,369 | INFO     | current chi2=0.0028861240427348884 (change=27.656900345688772 %)
[2025-02-22 16:51:20] 2025-02-22 15:51:08,370 | INFO     | model: linear, x: [1740216649.0, 1740216710.0, 1740216771.0, 1740216832.0, 1740216893.0, 1740216954.0, 1740217015.0, 1740217076.0, 1740217137.0, 1740217198.0, 1740
[2025-02-22 16:51:20] 2025-02-22 15:51:08,370 | INFO     | sum of square deviations: 16221466937.5
[2025-02-22 16:51:20] 2025-02-22 15:51:08,374 | INFO     | sum of deviations: 16517474805.499998
[2025-02-22 16:51:20] 2025-02-22 15:51:08,374 | INFO     | mean x: 1740228025.5
[2025-02-22 16:51:20] 2025-02-22 15:51:08,374 | INFO     | mean y: 2382360.3181818184
[2025-02-22 16:51:20] 2025-02-22 15:51:08,374 | INFO     | -- intersect: -1769601189.4908602
[2025-02-22 16:51:20] 2025-02-22 15:51:08,374 | INFO     | intersect: -1769601189.4908602
[2025-02-22 16:51:20] 2025-02-22 15:51:08,375 | INFO     | chi2: 0.0022154847554811995
[2025-02-22 16:51:20] 2025-02-22 15:51:08,375 | INFO     | current chi2=0.0022154847554811995 (change=23.23667580892302 %)
[2025-02-22 16:51:20] 2025-02-22 15:51:08,375 | INFO     | left removable region: 70
[2025-02-22 16:51:20] 2025-02-22 15:51:08,375 | INFO     | model: linear, x: [1740218784.0, 1740218845.0, 1740218906.0, 1740218967.0, 1740219028.0, 1740219089.0, 1740219150.0, 1740219211.0, 1740219272.0, 1740219333.0, 1740
[2025-02-22 16:51:20] 2025-02-22 15:51:08,375 | INFO     | sum of square deviations: 11450045382.0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,378 | INFO     | sum of deviations: 7142043907.000001
[2025-02-22 16:51:20] 2025-02-22 15:51:08,378 | INFO     | mean x: 1740228910.0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,379 | INFO     | mean y: 2384479.9519519517
[2025-02-22 16:51:20] 2025-02-22 15:51:08,379 | INFO     | -- intersect: -1083095172.6430838
[2025-02-22 16:51:20] 2025-02-22 15:51:08,379 | INFO     | intersect: -1083095172.6430838
[2025-02-22 16:51:20] 2025-02-22 15:51:08,379 | INFO     | chi2: 0.0007605356768189987
[2025-02-22 16:51:20] 2025-02-22 15:51:08,380 | INFO     | -- intersect: -1083095172.6430838
[2025-02-22 16:51:20] 2025-02-22 15:51:08,380 | INFO     | current memory leak: 0.62 B/s (using 333 data points, chi2=0.00)
[2025-02-22 16:51:20] 2025-02-22 15:51:08,381 | INFO     | ..............................
[2025-02-22 16:51:20] 2025-02-22 15:51:08,381 | INFO     | . Timing measurements:
[2025-02-22 16:51:20] 2025-02-22 15:51:08,381 | INFO     | . get job = 0 s
[2025-02-22 16:51:20] 2025-02-22 15:51:08,381 | INFO     | . initial setup = 1 s
[2025-02-22 16:51:20] 2025-02-22 15:51:08,381 | INFO     | . payload setup = 5 s
[2025-02-22 16:51:20] 2025-02-22 15:51:08,381 | INFO     | . stage-in = 0 s
[2025-02-22 16:51:20] 2025-02-22 15:51:08,381 | INFO     | . payload execution = 24945 s
[2025-02-22 16:51:20] 2025-02-22 15:51:08,381 | INFO     | . stage-out = 1 s
[2025-02-22 16:51:20] 2025-02-22 15:51:08,381 | INFO     | . log creation = 0 s
[2025-02-22 16:51:20] 2025-02-22 15:51:08,381 | INFO     | ..............................
[2025-02-22 16:51:20] 2025-02-22 15:51:08,667 | INFO     | 
[2025-02-22 16:51:20] 2025-02-22 15:51:08,667 | INFO     | job summary report
[2025-02-22 16:51:20] 2025-02-22 15:51:08,667 | INFO     | --------------------------------------------------
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | PanDA job id: 6520835623
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | task id: 43205094
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | errors: (none)
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | pilot state: finished 
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | transexitcode: 0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | exeerrorcode: 0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | exeerrordiag: 
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | exitcode: 0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | exitmsg: OK
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | cpuconsumptiontime: 95340 s
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | nevents: 400
[2025-02-22 16:51:20] 2025-02-22 15:51:08,668 | INFO     | neventsw: 0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,669 | INFO     | pid: 3218904
[2025-02-22 16:51:20] 2025-02-22 15:51:08,669 | INFO     | pgrp: 3218904
[2025-02-22 16:51:20] 2025-02-22 15:51:08,669 | INFO     | corecount: 4
[2025-02-22 16:51:20] 2025-02-22 15:51:08,669 | INFO     | event service: False
[2025-02-22 16:51:20] 2025-02-22 15:51:08,669 | INFO     | sizes: {0: 2383143, 1: 2383398, 6: 2383604, 12: 2383632, 24954: 2419113, 24955: 2428076, 24957: 2428260, 24965: 2428430}
[2025-02-22 16:51:20] 2025-02-22 15:51:08,669 | INFO     | --------------------------------------------------
[2025-02-22 16:51:20] 2025-02-22 15:51:08,669 | INFO     | 
[2025-02-22 16:51:20] 2025-02-22 15:51:08,669 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-02-22 16:51:20] 2025-02-22 15:51:08,688 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,688 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,688 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,688 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,688 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,688 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 16:51:20] 2025-02-22 15:51:08,689 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,690 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 16:51:20] 2025-02-22 15:51:08,690 | INFO     | job 6520835623 has completed (purged errors)
[2025-02-22 16:51:20] 2025-02-22 15:51:08,690 | INFO     | overall cleanup function is called
[2025-02-22 16:51:20] 2025-02-22 15:51:09,698 | INFO     | --- collectZombieJob: --- 10, [3218904]
[2025-02-22 16:51:20] 2025-02-22 15:51:09,698 | INFO     | zombie collector waiting for pid 3218904
[2025-02-22 16:51:20] 2025-02-22 15:51:09,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 16:51:20] 2025-02-22 15:51:09,698 | INFO     | collected zombie processes
[2025-02-22 16:51:20] 2025-02-22 15:51:09,698 | INFO     | will attempt to kill all subprocesses of pid=3218904
[2025-02-22 16:51:20] 2025-02-22 15:51:09,842 | INFO     | process IDs to be killed: [3218904] (in reverse order)
[2025-02-22 16:51:20] 2025-02-22 15:51:09,948 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 16:51:20] 2025-02-22 15:51:09,949 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 16:51:20] 2025-02-22 15:51:09,959 | INFO     | did not find any defunct processes belonging to 3218904
[2025-02-22 16:51:20] 2025-02-22 15:51:09,968 | INFO     | did not find any defunct processes belonging to 3218904
[2025-02-22 16:51:20] 2025-02-22 15:51:09,969 | INFO     | ready for new job
[2025-02-22 16:51:20] 2025-02-22 15:51:09,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 16:51:20] 2025-02-22 15:51:09,972 | INFO     | **************************************
[2025-02-22 16:51:20] 2025-02-22 15:51:09,972 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 16:51:20] 2025-02-22 15:51:09,972 | INFO     | **************************************
[2025-02-22 16:51:20] 2025-02-22 15:51:09,972 | INFO     | 
[2025-02-22 16:51:20] 2025-02-22 15:51:09,976 | INFO     | architecture information:
[2025-02-22 16:51:20] 2025-02-22 15:51:09,976 | INFO     | executing command: cat /etc/os-release
[2025-02-22 16:51:20] 2025-02-22 15:51:09,990 | INFO     | cat /etc/os-release:
[2025-02-22 16:51:20] NAME="CentOS Linux"
[2025-02-22 16:51:20] VERSION="7 (Core)"
[2025-02-22 16:51:20] ID="centos"
[2025-02-22 16:51:20] ID_LIKE="rhel fedora"
[2025-02-22 16:51:20] VERSION_ID="7"
[2025-02-22 16:51:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 16:51:20] ANSI_COLOR="0;31"
[2025-02-22 16:51:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 16:51:20] HOME_URL="https://www.centos.org/"
[2025-02-22 16:51:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 16:51:20] 
[2025-02-22 16:51:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 16:51:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 16:51:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 16:51:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 16:51:20] 
[2025-02-22 16:51:20] 2025-02-22 15:51:09,990 | INFO     | **************************************
[2025-02-22 16:51:20] 2025-02-22 15:51:10,493 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-02-22 16:51:20] 2025-02-22 15:51:10,510 | INFO     | sufficient remaining disk space (644083613696 B)
[2025-02-22 16:51:20] 2025-02-22 15:51:10,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 16:51:20] 2025-02-22 15:51:10,510 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 16:51:20] 2025-02-22 15:51:10,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 16:51:20] 2025-02-22 15:51:10,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 16:51:20] 2025-02-22 15:51:10,511 | INFO     | aborting loop
[2025-02-22 16:51:20] 2025-02-22 15:51:10,551 | INFO     | all data control threads have been joined
[2025-02-22 16:51:20] 2025-02-22 15:51:11,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 16:51:20] 2025-02-22 15:51:11,443 | INFO     | all payload control threads have been joined
[2025-02-22 16:51:20] 2025-02-22 15:51:11,516 | INFO     | [job] job monitor thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:11,519 | INFO     | [job] retrieve thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:11,557 | INFO     | [data] control thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:11,584 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:11,627 | INFO     | PID=3209577 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-22 16:51:20] 2025-02-22 15:51:11,628 | INFO     | .. there are 12 such processes running
[2025-02-22 16:51:20] 2025-02-22 15:51:11,628 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 16:51:20] 2025-02-22 15:51:11,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 16:51:20] 2025-02-22 15:51:11,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 16:51:20] 2025-02-22 15:51:11,667 | INFO     | all job control threads have been joined
[2025-02-22 16:51:20] 2025-02-22 15:51:11,684 | INFO     | [data] copytool_in thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:11,790 | INFO     | [payload] validate_post thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:12,043 | INFO     | [payload] failed_post thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:12,398 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:12,448 | INFO     | [payload] control thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:12,519 | INFO     | [data] copytool_out thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:12,672 | INFO     | [job] control thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:12,673 | INFO     | [job] validate thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:12,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:13,003 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:13,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 16:51:20] 2025-02-22 15:51:14,493 | INFO     | [job] queue monitor thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:15,157 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 16:51:20] 2025-02-22 15:51:15,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22725231490880)>', '<ExcThread(monitor, started 22724929890048)>']
[2025-02-22 16:51:20] 2025-02-22 15:51:15,644 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 16:51:20] 2025-02-22 15:51:15,644 | INFO     | [monitor] control thread has ended
[2025-02-22 16:51:20] 2025-02-22 15:51:20,235 | INFO     | all workflow threads have been joined
[2025-02-22 16:51:20] 2025-02-22 15:51:20,235 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 16:51:20] 2025-02-22 15:51:20,236 | INFO     | traces error code: 0
[2025-02-22 16:51:20] 2025-02-22 15:51:20,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 16:51:20] 2025-02-22 15:51:20,371 [wrapper] ==== pilot stdout END ====
[2025-02-22 16:51:20] 2025-02-22 15:51:20,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 16:51:20] 2025-02-22 15:51:20,376 [wrapper] pilotpid: 3209577
[2025-02-22 16:51:20] 2025-02-22 15:51:20,379 [wrapper] Pilot exit status: 0
[2025-02-22 16:51:20] 2025-02-22 15:51:20,389 [wrapper] pandaids: 6520835623
[2025-02-22 16:51:20] 2025-02-22 15:51:20,452 [wrapper] cleanup supervisor_pilot 4060799 3209578
[2025-02-22 16:51:20] 2025-02-22 15:51:20,455 [wrapper] Test setup, not cleaning
[2025-02-22 16:51:20] 2025-02-22 15:51:20,460 [wrapper] apfmon messages muted
[2025-02-22 16:51:20] 2025-02-22 15:51:20,463 [wrapper] ==== wrapper stdout END ====
[2025-02-22 16:51:20] 2025-02-22 15:51:20,466 [wrapper] ==== wrapper stderr END ====
[2025-02-22 16:51:20]  *** Error codes and diagnostics ***
[2025-02-22 16:51:20]     "exeErrorCode": 0,
[2025-02-22 16:51:20]     "exeErrorDiag": "",
[2025-02-22 16:51:20]     "pilotErrorCode": 0,
[2025-02-22 16:51:20]     "pilotErrorDiag": "",
[2025-02-22 16:51:20]  *** Listing of results directory ***
[2025-02-22 16:51:20] total 667020
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc    491065 Feb 20 13:21 pilot3.tar.gz
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc      5118 Feb 20 13:54 queuedata.json
[2025-02-22 16:51:20] -rwx------ 1 boinc boinc     35865 Feb 20 13:54 runpilot2-wrapper.sh
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc       100 Feb 22 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 16:51:20] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 09:54 run_atlas
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc       105 Feb 22 09:54 job.xml
[2025-02-22 16:51:20] -rw-r--r-- 2 boinc boinc 342433778 Feb 22 09:54 EVNT.43092757._001839.pool.root.1
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc      6633 Feb 22 09:54 init_data.xml
[2025-02-22 16:51:20] drwxrwx--x 2 boinc boinc      4096 Feb 22 09:54 shared
[2025-02-22 16:51:20] -rw-r--r-- 2 boinc boinc    503556 Feb 22 09:54 input.tar.gz
[2025-02-22 16:51:20] -rw-r--r-- 2 boinc boinc     17569 Feb 22 09:54 start_atlas.sh
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc         0 Feb 22 09:54 boinc_lockfile
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc      2547 Feb 22 09:54 pandaJob.out
[2025-02-22 16:51:20] -rw------- 1 boinc boinc       424 Feb 22 09:54 setup.sh.local
[2025-02-22 16:51:20] -rw------- 1 boinc boinc    988009 Feb 22 09:54 agis_schedconf.cvmfs.json
[2025-02-22 16:51:20] drwx------ 4 boinc boinc      4096 Feb 22 09:54 pilot3
[2025-02-22 16:51:20] -rw------- 1 boinc boinc 329782207 Feb 22 16:50 HITS.43205094._026990.pool.root.1
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc       532 Feb 22 16:50 boinc_task_state.xml
[2025-02-22 16:51:20] -rw------- 1 boinc boinc        95 Feb 22 16:50 pilot_heartbeat.json
[2025-02-22 16:51:20] -rw------- 1 boinc boinc      1037 Feb 22 16:50 memory_monitor_summary.json
[2025-02-22 16:51:20] -rw------- 1 boinc boinc   1582569 Feb 22 16:50 agis_ddmendpoints.agis.ALL.json
[2025-02-22 16:51:20] -rw------- 1 boinc boinc    484121 Feb 22 16:50 log.43205094._026990.job.log.tgz.1
[2025-02-22 16:51:20] -rw------- 1 boinc boinc      7740 Feb 22 16:51 heartbeat.json
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc      8192 Feb 22 16:51 boinc_mmap_file
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc        28 Feb 22 16:51 wrapper_checkpoint.txt
[2025-02-22 16:51:20] -rw------- 1 boinc boinc      4620 Feb 22 16:51 pilotlog.txt
[2025-02-22 16:51:20] -rw------- 1 boinc boinc   3016755 Feb 22 16:51 log.43205094._026990.job.log.1
[2025-02-22 16:51:20] -rw------- 1 boinc boinc       357 Feb 22 16:51 output.list
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc       620 Feb 22 16:51 runtime_log
[2025-02-22 16:51:20] -rw------- 1 boinc boinc   3522560 Feb 22 16:51 result.tar.gz
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc     11424 Feb 22 16:51 runtime_log.err
[2025-02-22 16:51:20] -rw------- 1 boinc boinc       665 Feb 22 16:51 r4yLDm4FL56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm2FqKDmTELLam.diag
[2025-02-22 16:51:20] -rw-r--r-- 1 boinc boinc     21507 Feb 22 16:51 stderr.txt
[2025-02-22 16:51:20] HITS file was successfully produced:
[2025-02-22 16:51:20] -rw------- 1 boinc boinc 329782207 Feb 22 16:50 shared/HITS.pool.root.1
[2025-02-22 16:51:20]  *** Contents of shared directory: ***
[2025-02-22 16:51:20] total 660424
[2025-02-22 16:51:20] -rw-r--r-- 2 boinc boinc 342433778 Feb 22 09:54 ATLAS.root_0
[2025-02-22 16:51:20] -rw-r--r-- 2 boinc boinc    503556 Feb 22 09:54 input.tar.gz
[2025-02-22 16:51:20] -rw-r--r-- 2 boinc boinc     17569 Feb 22 09:54 start_atlas.sh
[2025-02-22 16:51:20] -rw------- 1 boinc boinc 329782207 Feb 22 16:50 HITS.pool.root.1
[2025-02-22 16:51:20] -rw------- 1 boinc boinc   3522560 Feb 22 16:51 result.tar.gz
16:51:22 (3205835): run_atlas exited; CPU time 95371.113254
16:51:22 (3205835): called boinc_finish(0)

</stderr_txt>
]]>

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