Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:55:14 (2498662): wrapper (7.7.26015): starting
18:55:14 (2498662): wrapper: running run_atlas (--nthreads 4)
[2025-02-21 18:55:14] Arguments: --nthreads 4
[2025-02-21 18:55:14] Threads: 4
[2025-02-21 18:55:14] Checking for CVMFS
[2025-02-21 18:55:14] No cvmfs_config command found, will try listing directly
[2025-02-21 18:55:14] CVMFS is ok
[2025-02-21 18:55:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 18:55:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 18:55:14] Further information can be found at the LHC@home message board.
[2025-02-21 18:55:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 18:55:14] Checking for apptainer binary...
[2025-02-21 18:55:14] which: no apptainer in ((null))
[2025-02-21 18:55:14] apptainer is not installed, using version from CVMFS
[2025-02-21 18:55:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 18:55:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-02-21 18:55:14] apptainer works
[2025-02-21 18:55:14] Set ATHENA_PROC_NUMBER=4
[2025-02-21 18:55:14] Set ATHENA_CORE_NUMBER=4
[2025-02-21 18:55:14] Starting ATLAS job with PandaID=6520502638
[2025-02-21 18:55:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 01:28:03]  *** The last 200 lines of the pilot log: ***
[2025-02-22 01:28:03] 2025-02-22 00:27:43,671 | INFO     | fitting pss+swap vs Time
[2025-02-22 01:28:03] 2025-02-22 00:27:43,671 | INFO     | model: linear, x: [1740160551.0, 1740160612.0, 1740160673.0, 1740160734.0, 1740160795.0, 1740160856.0, 1740160917.0, 1740160978.0, 1740161039.0, 1740161100.0, 1740
[2025-02-22 01:28:03] 2025-02-22 00:27:43,671 | INFO     | sum of square deviations: 17833534372.5
[2025-02-22 01:28:03] 2025-02-22 00:27:43,675 | INFO     | sum of deviations: 200585260194.00003
[2025-02-22 01:28:03] 2025-02-22 00:27:43,675 | INFO     | mean x: 1740172293.5
[2025-02-22 01:28:03] 2025-02-22 00:27:43,675 | INFO     | mean y: 2328746.8704663212
[2025-02-22 01:28:03] 2025-02-22 00:27:43,675 | INFO     | -- intersect: -19570511105.466396
[2025-02-22 01:28:03] 2025-02-22 00:27:43,675 | INFO     | intersect: -19570511105.466396
[2025-02-22 01:28:03] 2025-02-22 00:27:43,676 | INFO     | chi2: 5.158289140511192
[2025-02-22 01:28:03] 2025-02-22 00:27:43,676 | INFO     | model: linear, x: [1740160551.0, 1740160612.0, 1740160673.0, 1740160734.0, 1740160795.0, 1740160856.0, 1740160917.0, 1740160978.0, 1740161039.0, 1740161100.0, 1740
[2025-02-22 01:28:03] 2025-02-22 00:27:43,678 | INFO     | sum of square deviations: 17149456430.0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,682 | INFO     | sum of deviations: 222562436391.00003
[2025-02-22 01:28:03] 2025-02-22 00:27:43,682 | INFO     | mean x: 1740172141.0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,682 | INFO     | mean y: 2333587.905511811
[2025-02-22 01:28:03] 2025-02-22 00:27:43,683 | INFO     | -- intersect: -22581294821.633698
[2025-02-22 01:28:03] 2025-02-22 00:27:43,683 | INFO     | intersect: -22581294821.633698
[2025-02-22 01:28:03] 2025-02-22 00:27:43,683 | INFO     | chi2: 4.364553466282257
[2025-02-22 01:28:03] 2025-02-22 00:27:43,683 | INFO     | current chi2=4.364553466282257 (change=15.387576241030077 %)
[2025-02-22 01:28:03] 2025-02-22 00:27:43,683 | INFO     | right removable region: 380
[2025-02-22 01:28:03] 2025-02-22 00:27:43,684 | INFO     | model: linear, x: [1740160856.0, 1740160917.0, 1740160978.0, 1740161039.0, 1740161100.0, 1740161161.0, 1740161222.0, 1740161283.0, 1740161344.0, 1740161405.0, 1740
[2025-02-22 01:28:03] 2025-02-22 00:27:43,684 | INFO     | sum of square deviations: 17149456430.0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,688 | INFO     | sum of deviations: 105911259577.00003
[2025-02-22 01:28:03] 2025-02-22 00:27:43,688 | INFO     | mean x: 1740172446.0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,688 | INFO     | mean y: 2349823.8897637795
[2025-02-22 01:28:03] 2025-02-22 00:27:43,688 | INFO     | -- intersect: -10744571303.863384
[2025-02-22 01:28:03] 2025-02-22 00:27:43,688 | INFO     | intersect: -10744571303.863384
[2025-02-22 01:28:03] 2025-02-22 00:27:43,689 | INFO     | chi2: 2.572857283041753
[2025-02-22 01:28:03] 2025-02-22 00:27:43,689 | INFO     | current chi2=2.572857283041753 (change=50.12188706453977 %)
[2025-02-22 01:28:03] 2025-02-22 00:27:43,689 | INFO     | model: linear, x: [1740161161.0, 1740161222.0, 1740161283.0, 1740161344.0, 1740161405.0, 1740161466.0, 1740161527.0, 1740161588.0, 1740161649.0, 1740161710.0, 1740
[2025-02-22 01:28:03] 2025-02-22 00:27:43,690 | INFO     | sum of square deviations: 16483099750.0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,693 | INFO     | sum of deviations: 28136825748.500034
[2025-02-22 01:28:03] 2025-02-22 00:27:43,693 | INFO     | mean x: 1740172598.5
[2025-02-22 01:28:03] 2025-02-22 00:27:43,693 | INFO     | mean y: 2367623.3164893617
[2025-02-22 01:28:03] 2025-02-22 00:27:43,693 | INFO     | -- intersect: -2968125422.223019
[2025-02-22 01:28:03] 2025-02-22 00:27:43,694 | INFO     | intersect: -2968125422.223019
[2025-02-22 01:28:03] 2025-02-22 00:27:43,694 | INFO     | chi2: 0.9624788342336594
[2025-02-22 01:28:03] 2025-02-22 00:27:43,694 | INFO     | current chi2=0.9624788342336594 (change=62.59105234567183 %)
[2025-02-22 01:28:03] 2025-02-22 00:27:43,694 | INFO     | model: linear, x: [1740161466.0, 1740161527.0, 1740161588.0, 1740161649.0, 1740161710.0, 1740161771.0, 1740161832.0, 1740161893.0, 1740161954.0, 1740162015.0, 1740
[2025-02-22 01:28:03] 2025-02-22 00:27:43,695 | INFO     | sum of square deviations: 15834231770.0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,698 | INFO     | sum of deviations: 8355303407.0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,698 | INFO     | mean x: 1740172751.0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,698 | INFO     | mean y: 2372257.153638814
[2025-02-22 01:28:03] 2025-02-22 00:27:43,698 | INFO     | -- intersect: -915870669.0833101
[2025-02-22 01:28:03] 2025-02-22 00:27:43,699 | INFO     | intersect: -915870669.0833101
[2025-02-22 01:28:03] 2025-02-22 00:27:43,699 | INFO     | chi2: 0.8400094836765668
[2025-02-22 01:28:03] 2025-02-22 00:27:43,699 | INFO     | current chi2=0.8400094836765668 (change=12.724368183597992 %)
[2025-02-22 01:28:03] 2025-02-22 00:27:43,699 | INFO     | left removable region: 30
[2025-02-22 01:28:03] 2025-02-22 00:27:43,700 | INFO     | model: linear, x: [1740162381.0, 1740162442.0, 1740162503.0, 1740162564.0, 1740162625.0, 1740162686.0, 1740162747.0, 1740162808.0, 1740162869.0, 1740162930.0, 1740
[2025-02-22 01:28:03] 2025-02-22 00:27:43,701 | INFO     | sum of square deviations: 13294714387.5
[2025-02-22 01:28:03] 2025-02-22 00:27:43,705 | INFO     | sum of deviations: 18871682941.5
[2025-02-22 01:28:03] 2025-02-22 00:27:43,705 | INFO     | mean x: 1740173025.5
[2025-02-22 01:28:03] 2025-02-22 00:27:43,705 | INFO     | mean y: 2381132.705714286
[2025-02-22 01:28:03] 2025-02-22 00:27:43,705 | INFO     | -- intersect: -2467772993.4681973
[2025-02-22 01:28:03] 2025-02-22 00:27:43,705 | INFO     | intersect: -2467772993.4681973
[2025-02-22 01:28:03] 2025-02-22 00:27:43,705 | INFO     | chi2: 0.002808196811268839
[2025-02-22 01:28:03] 2025-02-22 00:27:43,706 | INFO     | -- intersect: -2467772993.4681973
[2025-02-22 01:28:03] 2025-02-22 00:27:43,706 | INFO     | current memory leak: 1.42 B/s (using 350 data points, chi2=0.00)
[2025-02-22 01:28:03] 2025-02-22 00:27:43,707 | INFO     | ..............................
[2025-02-22 01:28:03] 2025-02-22 00:27:43,707 | INFO     | . Timing measurements:
[2025-02-22 01:28:03] 2025-02-22 00:27:43,707 | INFO     | . get job = 0 s
[2025-02-22 01:28:03] 2025-02-22 00:27:43,707 | INFO     | . initial setup = 1 s
[2025-02-22 01:28:03] 2025-02-22 00:27:43,707 | INFO     | . payload setup = 6 s
[2025-02-22 01:28:03] 2025-02-22 00:27:43,707 | INFO     | . stage-in = 0 s
[2025-02-22 01:28:03] 2025-02-22 00:27:43,707 | INFO     | . payload execution = 23501 s
[2025-02-22 01:28:03] 2025-02-22 00:27:43,707 | INFO     | . stage-out = 1 s
[2025-02-22 01:28:03] 2025-02-22 00:27:43,707 | INFO     | . log creation = 0 s
[2025-02-22 01:28:03] 2025-02-22 00:27:43,708 | INFO     | ..............................
[2025-02-22 01:28:03] 2025-02-22 00:27:43,810 | INFO     | 
[2025-02-22 01:28:03] 2025-02-22 00:27:43,810 | INFO     | job summary report
[2025-02-22 01:28:03] 2025-02-22 00:27:43,811 | INFO     | --------------------------------------------------
[2025-02-22 01:28:03] 2025-02-22 00:27:43,811 | INFO     | PanDA job id: 6520502638
[2025-02-22 01:28:03] 2025-02-22 00:27:43,811 | INFO     | task id: 43205075
[2025-02-22 01:28:03] 2025-02-22 00:27:43,811 | INFO     | errors: (none)
[2025-02-22 01:28:03] 2025-02-22 00:27:43,811 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 01:28:03] 2025-02-22 00:27:43,813 | INFO     | pilot state: finished 
[2025-02-22 01:28:03] 2025-02-22 00:27:43,813 | INFO     | transexitcode: 0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | exeerrorcode: 0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | exeerrordiag: 
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | exitcode: 0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | exitmsg: OK
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | cpuconsumptiontime: 89087 s
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | nevents: 400
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | neventsw: 0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | pid: 2510360
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | pgrp: 2510360
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | corecount: 4
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | event service: False
[2025-02-22 01:28:03] 2025-02-22 00:27:43,814 | INFO     | sizes: {0: 2382535, 1: 2383402, 6: 2383608, 12: 2383636, 23511: 2418287, 23512: 2418286, 23514: 2427433, 23515: 2427489, 23524: 2427659}
[2025-02-22 01:28:03] 2025-02-22 00:27:43,815 | INFO     | --------------------------------------------------
[2025-02-22 01:28:03] 2025-02-22 00:27:43,815 | INFO     | 
[2025-02-22 01:28:03] 2025-02-22 00:27:43,815 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-02-22 01:28:03] 2025-02-22 00:27:43,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,844 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 01:28:03] 2025-02-22 00:27:43,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 01:28:03] 2025-02-22 00:27:43,846 | INFO     | job 6520502638 has completed (purged errors)
[2025-02-22 01:28:03] 2025-02-22 00:27:43,846 | INFO     | overall cleanup function is called
[2025-02-22 01:28:03] 2025-02-22 00:27:44,855 | INFO     | --- collectZombieJob: --- 10, [2510360]
[2025-02-22 01:28:03] 2025-02-22 00:27:44,855 | INFO     | zombie collector waiting for pid 2510360
[2025-02-22 01:28:03] 2025-02-22 00:27:44,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 01:28:03] 2025-02-22 00:27:44,855 | INFO     | collected zombie processes
[2025-02-22 01:28:03] 2025-02-22 00:27:44,855 | INFO     | will attempt to kill all subprocesses of pid=2510360
[2025-02-22 01:28:03] 2025-02-22 00:27:45,180 | INFO     | process IDs to be killed: [2510360] (in reverse order)
[2025-02-22 01:28:03] 2025-02-22 00:27:45,443 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 01:28:03] 2025-02-22 00:27:45,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 01:28:03] 2025-02-22 00:27:45,469 | INFO     | did not find any defunct processes belonging to 2510360
[2025-02-22 01:28:03] 2025-02-22 00:27:45,493 | INFO     | did not find any defunct processes belonging to 2510360
[2025-02-22 01:28:03] 2025-02-22 00:27:45,493 | INFO     | ready for new job
[2025-02-22 01:28:03] 2025-02-22 00:27:45,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 01:28:03] 2025-02-22 00:27:45,496 | INFO     | **************************************
[2025-02-22 01:28:03] 2025-02-22 00:27:45,496 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 01:28:03] 2025-02-22 00:27:45,496 | INFO     | **************************************
[2025-02-22 01:28:03] 2025-02-22 00:27:45,496 | INFO     | 
[2025-02-22 01:28:03] 2025-02-22 00:27:45,505 | INFO     | architecture information:
[2025-02-22 01:28:03] 2025-02-22 00:27:45,505 | INFO     | executing command: cat /etc/os-release
[2025-02-22 01:28:03] 2025-02-22 00:27:45,527 | INFO     | cat /etc/os-release:
[2025-02-22 01:28:03] NAME="CentOS Linux"
[2025-02-22 01:28:03] VERSION="7 (Core)"
[2025-02-22 01:28:03] ID="centos"
[2025-02-22 01:28:03] ID_LIKE="rhel fedora"
[2025-02-22 01:28:03] VERSION_ID="7"
[2025-02-22 01:28:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 01:28:03] ANSI_COLOR="0;31"
[2025-02-22 01:28:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 01:28:03] HOME_URL="https://www.centos.org/"
[2025-02-22 01:28:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 01:28:03] 
[2025-02-22 01:28:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 01:28:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 01:28:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 01:28:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 01:28:03] 
[2025-02-22 01:28:03] 2025-02-22 00:27:45,527 | INFO     | **************************************
[2025-02-22 01:28:03] 2025-02-22 00:27:46,030 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-02-22 01:28:03] 2025-02-22 00:27:46,047 | INFO     | sufficient remaining disk space (3252373422080 B)
[2025-02-22 01:28:03] 2025-02-22 00:27:46,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 01:28:03] 2025-02-22 00:27:46,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 01:28:03] 2025-02-22 00:27:46,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 01:28:03] 2025-02-22 00:27:46,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 01:28:03] 2025-02-22 00:27:46,048 | INFO     | aborting loop
[2025-02-22 01:28:03] 2025-02-22 00:27:46,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 01:28:03] 2025-02-22 00:27:46,575 | INFO     | all data control threads have been joined
[2025-02-22 01:28:03] 2025-02-22 00:27:46,680 | INFO     | all job control threads have been joined
[2025-02-22 01:28:03] 2025-02-22 00:27:47,053 | INFO     | [job] retrieve thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:47,054 | INFO     | [job] job monitor thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:47,224 | INFO     | PID=2502716 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-22 01:28:03] 2025-02-22 00:27:47,225 | INFO     | .. there are 26 such processes running
[2025-02-22 01:28:03] 2025-02-22 00:27:47,225 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 01:28:03] 2025-02-22 00:27:47,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 01:28:03] 2025-02-22 00:27:47,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 01:28:03] 2025-02-22 00:27:47,280 | INFO     | all payload control threads have been joined
[2025-02-22 01:28:03] 2025-02-22 00:27:47,580 | INFO     | [data] control thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:47,667 | INFO     | [payload] failed_post thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:47,685 | INFO     | [job] control thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:47,807 | INFO     | [job] validate thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:47,822 | INFO     | [data] copytool_in thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:48,120 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:48,264 | INFO     | [payload] validate_post thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:48,285 | INFO     | [payload] control thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:48,306 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:48,307 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:48,385 | INFO     | [data] copytool_out thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:48,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 01:28:03] 2025-02-22 00:27:49,826 | INFO     | [job] queue monitor thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:50,054 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:56,584 | INFO     | job.realtimelogging is not enabled
[2025-02-22 01:28:03] 2025-02-22 00:27:57,589 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 01:28:03] 2025-02-22 00:27:58,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22569549920064)>', '<ExcThread(monitor, started 22568970991360)>']
[2025-02-22 01:28:03] 2025-02-22 00:27:58,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 01:28:03] 2025-02-22 00:27:58,281 | INFO     | [monitor] control thread has ended
[2025-02-22 01:28:03] 2025-02-22 00:28:03,086 | INFO     | all workflow threads have been joined
[2025-02-22 01:28:03] 2025-02-22 00:28:03,086 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 01:28:03] 2025-02-22 00:28:03,086 | INFO     | traces error code: 0
[2025-02-22 01:28:03] 2025-02-22 00:28:03,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 01:28:03] 2025-02-22 00:28:03,309 [wrapper] ==== pilot stdout END ====
[2025-02-22 01:28:03] 2025-02-22 00:28:03,315 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 01:28:03] 2025-02-22 00:28:03,319 [wrapper] pilotpid: 2502716
[2025-02-22 01:28:03] 2025-02-22 00:28:03,323 [wrapper] Pilot exit status: 0
[2025-02-22 01:28:03] 2025-02-22 00:28:03,336 [wrapper] pandaids: 6520502638
[2025-02-22 01:28:03] 2025-02-22 00:28:03,472 [wrapper] cleanup supervisor_pilot 4143094 2502717
[2025-02-22 01:28:03] 2025-02-22 00:28:03,477 [wrapper] Test setup, not cleaning
[2025-02-22 01:28:03] 2025-02-22 00:28:03,485 [wrapper] apfmon messages muted
[2025-02-22 01:28:03] 2025-02-22 00:28:03,492 [wrapper] ==== wrapper stdout END ====
[2025-02-22 01:28:03] 2025-02-22 00:28:03,496 [wrapper] ==== wrapper stderr END ====
[2025-02-22 01:28:03]  *** Error codes and diagnostics ***
[2025-02-22 01:28:03]     "exeErrorCode": 0,
[2025-02-22 01:28:03]     "exeErrorDiag": "",
[2025-02-22 01:28:03]     "pilotErrorCode": 0,
[2025-02-22 01:28:03]     "pilotErrorDiag": "",
[2025-02-22 01:28:03]  *** Listing of results directory ***
[2025-02-22 01:28:03] total 663460
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc    491065 Feb 20 08:55 pilot3.tar.gz
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc      5118 Feb 20 09:15 queuedata.json
[2025-02-22 01:28:03] -rwx------ 1 boinc boinc     35865 Feb 20 09:16 runpilot2-wrapper.sh
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc       100 Feb 21 18:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 01:28:03] -rwxr-xr-x 1 boinc boinc      7986 Feb 21 18:55 run_atlas
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc       105 Feb 21 18:55 job.xml
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc      6675 Feb 21 18:55 init_data.xml
[2025-02-22 01:28:03] -rw-r--r-- 2 boinc boinc 342153547 Feb 21 18:55 EVNT.43092757._000269.pool.root.1
[2025-02-22 01:28:03] -rw-r--r-- 2 boinc boinc     17569 Feb 21 18:55 start_atlas.sh
[2025-02-22 01:28:03] drwxrwx--x 2 boinc boinc      4096 Feb 21 18:55 shared
[2025-02-22 01:28:03] -rw-r--r-- 2 boinc boinc    503558 Feb 21 18:55 input.tar.gz
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc         0 Feb 21 18:55 boinc_lockfile
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc      2553 Feb 21 18:55 pandaJob.out
[2025-02-22 01:28:03] -rw------- 1 boinc boinc       424 Feb 21 18:55 setup.sh.local
[2025-02-22 01:28:03] -rw------- 1 boinc boinc    987293 Feb 21 18:55 agis_schedconf.cvmfs.json
[2025-02-22 01:28:03] drwx------ 4 boinc boinc      4096 Feb 21 18:55 pilot3
[2025-02-22 01:28:03] -rw------- 1 boinc boinc 327399409 Feb 22 01:26 HITS.43205075._054441.pool.root.1
[2025-02-22 01:28:03] -rw------- 1 boinc boinc        95 Feb 22 01:27 pilot_heartbeat.json
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc       532 Feb 22 01:27 boinc_task_state.xml
[2025-02-22 01:28:03] -rw------- 1 boinc boinc      1032 Feb 22 01:27 memory_monitor_summary.json
[2025-02-22 01:28:03] -rw------- 1 boinc boinc   1582569 Feb 22 01:27 agis_ddmendpoints.agis.ALL.json
[2025-02-22 01:28:03] -rw------- 1 boinc boinc    446616 Feb 22 01:27 log.43205075._054441.job.log.tgz.1
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc      8192 Feb 22 01:27 boinc_mmap_file
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc        28 Feb 22 01:27 wrapper_checkpoint.txt
[2025-02-22 01:28:03] -rw------- 1 boinc boinc      7702 Feb 22 01:27 heartbeat.json
[2025-02-22 01:28:03] -rw------- 1 boinc boinc      4694 Feb 22 01:28 pilotlog.txt
[2025-02-22 01:28:03] -rw------- 1 boinc boinc   2562944 Feb 22 01:28 log.43205075._054441.job.log.1
[2025-02-22 01:28:03] -rw------- 1 boinc boinc       357 Feb 22 01:28 output.list
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc       620 Feb 22 01:28 runtime_log
[2025-02-22 01:28:03] -rw------- 1 boinc boinc   3031040 Feb 22 01:28 result.tar.gz
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc     11424 Feb 22 01:28 runtime_log.err
[2025-02-22 01:28:03] -rw------- 1 boinc boinc       666 Feb 22 01:28 7jVNDmUuG56n9Rq4apOajLDm4fhM0noT9bVoFjIUDm1ebKDmddVkHo.diag
[2025-02-22 01:28:03] -rw-r--r-- 1 boinc boinc     21431 Feb 22 01:28 stderr.txt
[2025-02-22 01:28:03] HITS file was successfully produced:
[2025-02-22 01:28:03] -rw------- 1 boinc boinc 327399409 Feb 22 01:26 shared/HITS.pool.root.1
[2025-02-22 01:28:03]  *** Contents of shared directory: ***
[2025-02-22 01:28:03] total 657344
[2025-02-22 01:28:03] -rw-r--r-- 2 boinc boinc 342153547 Feb 21 18:55 ATLAS.root_0
[2025-02-22 01:28:03] -rw-r--r-- 2 boinc boinc     17569 Feb 21 18:55 start_atlas.sh
[2025-02-22 01:28:03] -rw-r--r-- 2 boinc boinc    503558 Feb 21 18:55 input.tar.gz
[2025-02-22 01:28:03] -rw------- 1 boinc boinc 327399409 Feb 22 01:26 HITS.pool.root.1
[2025-02-22 01:28:03] -rw------- 1 boinc boinc   3031040 Feb 22 01:28 result.tar.gz
01:28:05 (2498662): run_atlas exited; CPU time 88773.199158
01:28:05 (2498662): called boinc_finish(0)

</stderr_txt>
]]>

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