Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:52:27 (1437262): wrapper (7.7.26015): starting
07:52:27 (1437262): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 07:52:27] Arguments: --nthreads 4
[2025-02-22 07:52:27] Threads: 4
[2025-02-22 07:52:27] Checking for CVMFS
[2025-02-22 07:52:27] No cvmfs_config command found, will try listing directly
[2025-02-22 07:52:27] CVMFS is ok
[2025-02-22 07:52:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 07:52:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 07:52:27] Further information can be found at the LHC@home message board.
[2025-02-22 07:52:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 07:52:27] Checking for apptainer binary...
[2025-02-22 07:52:27] which: no apptainer in ((null))
[2025-02-22 07:52:27] apptainer is not installed, using version from CVMFS
[2025-02-22 07:52:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 07:52:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-02-22 07:52:27] apptainer works
[2025-02-22 07:52:27] Set ATHENA_PROC_NUMBER=4
[2025-02-22 07:52:27] Set ATHENA_CORE_NUMBER=4
[2025-02-22 07:52:27] Starting ATLAS job with PandaID=6520204566
[2025-02-22 07:52:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 13:42:43]  *** The last 200 lines of the pilot log: ***
[2025-02-22 13:42:43] 2025-02-22 12:42:23,240 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-22 13:42:43] 2025-02-22 12:42:23,247 | INFO     | fitting pss+swap vs Time
[2025-02-22 13:42:43] 2025-02-22 12:42:23,248 | INFO     | model: linear, x: [1740207193.0, 1740207254.0, 1740207315.0, 1740207376.0, 1740207437.0, 1740207498.0, 1740207559.0, 1740207620.0, 1740207681.0, 1740207742.0, 1740
[2025-02-22 13:42:43] 2025-02-22 12:42:23,248 | INFO     | sum of square deviations: 12622636670.0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,252 | INFO     | sum of deviations: 162190649527.0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,252 | INFO     | mean x: 1740217654.5
[2025-02-22 13:42:43] 2025-02-22 12:42:23,252 | INFO     | mean y: 2316236.343023256
[2025-02-22 13:42:43] 2025-02-22 12:42:23,252 | INFO     | -- intersect: -22358070034.816875
[2025-02-22 13:42:43] 2025-02-22 12:42:23,252 | INFO     | intersect: -22358070034.816875
[2025-02-22 13:42:43] 2025-02-22 12:42:23,253 | INFO     | chi2: 5.167756343401401
[2025-02-22 13:42:43] 2025-02-22 12:42:23,253 | INFO     | model: linear, x: [1740207193.0, 1740207254.0, 1740207315.0, 1740207376.0, 1740207437.0, 1740207498.0, 1740207559.0, 1740207620.0, 1740207681.0, 1740207742.0, 1740
[2025-02-22 13:42:43] 2025-02-22 12:42:23,253 | INFO     | sum of square deviations: 12080189290.0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,256 | INFO     | sum of deviations: 181434641423.99997
[2025-02-22 13:42:43] 2025-02-22 12:42:23,257 | INFO     | mean x: 1740217502.0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,257 | INFO     | mean y: 2321572.8702064897
[2025-02-22 13:42:43] 2025-02-22 12:42:23,257 | INFO     | -- intersect: -26134333316.84295
[2025-02-22 13:42:43] 2025-02-22 12:42:23,257 | INFO     | intersect: -26134333316.84295
[2025-02-22 13:42:43] 2025-02-22 12:42:23,257 | INFO     | chi2: 4.373409756928188
[2025-02-22 13:42:43] 2025-02-22 12:42:23,257 | INFO     | current chi2=4.373409756928188 (change=15.371208193426098 %)
[2025-02-22 13:42:43] 2025-02-22 12:42:23,258 | INFO     | right removable region: 338
[2025-02-22 13:42:43] 2025-02-22 12:42:23,258 | INFO     | model: linear, x: [1740207498.0, 1740207559.0, 1740207620.0, 1740207681.0, 1740207742.0, 1740207803.0, 1740207864.0, 1740207925.0, 1740207986.0, 1740208047.0, 1740
[2025-02-22 13:42:43] 2025-02-22 12:42:23,261 | INFO     | sum of square deviations: 12080189290.0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,264 | INFO     | sum of deviations: 77823185974.0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,264 | INFO     | mean x: 1740217807.0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,264 | INFO     | mean y: 2339917.0619469024
[2025-02-22 13:42:43] 2025-02-22 12:42:23,264 | INFO     | -- intersect: -11208518686.08395
[2025-02-22 13:42:43] 2025-02-22 12:42:23,264 | INFO     | intersect: -11208518686.08395
[2025-02-22 13:42:43] 2025-02-22 12:42:23,265 | INFO     | chi2: 2.5313335293675046
[2025-02-22 13:42:43] 2025-02-22 12:42:23,265 | INFO     | current chi2=2.5313335293675046 (change=51.016778633541605 %)
[2025-02-22 13:42:43] 2025-02-22 12:42:23,265 | INFO     | model: linear, x: [1740207803.0, 1740207864.0, 1740207925.0, 1740207986.0, 1740208047.0, 1740208108.0, 1740208169.0, 1740208230.0, 1740208291.0, 1740208352.0, 1740
[2025-02-22 13:42:43] 2025-02-22 12:42:23,265 | INFO     | sum of square deviations: 11553509647.5
[2025-02-22 13:42:43] 2025-02-22 12:42:23,269 | INFO     | sum of deviations: 9759731966.000004
[2025-02-22 13:42:43] 2025-02-22 12:42:23,269 | INFO     | mean x: 1740217959.5
[2025-02-22 13:42:43] 2025-02-22 12:42:23,269 | INFO     | mean y: 2359625.209580838
[2025-02-22 13:42:43] 2025-02-22 12:42:23,269 | INFO     | -- intersect: -1467675140.4440348
[2025-02-22 13:42:43] 2025-02-22 12:42:23,269 | INFO     | intersect: -1467675140.4440348
[2025-02-22 13:42:43] 2025-02-22 12:42:23,269 | INFO     | chi2: 0.9487574547074709
[2025-02-22 13:42:43] 2025-02-22 12:42:23,270 | INFO     | current chi2=0.9487574547074709 (change=62.5194608414746 %)
[2025-02-22 13:42:43] 2025-02-22 12:42:23,270 | INFO     | model: linear, x: [1740208108.0, 1740208169.0, 1740208230.0, 1740208291.0, 1740208352.0, 1740208413.0, 1740208474.0, 1740208535.0, 1740208596.0, 1740208657.0, 1740
[2025-02-22 13:42:43] 2025-02-22 12:42:23,270 | INFO     | sum of square deviations: 11042365180.0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,273 | INFO     | sum of deviations: -5668940754.999998
[2025-02-22 13:42:43] 2025-02-22 12:42:23,273 | INFO     | mean x: 1740218112.0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,273 | INFO     | mean y: 2364201.498480243
[2025-02-22 13:42:43] 2025-02-22 12:42:23,274 | INFO     | -- intersect: 895759159.6342471
[2025-02-22 13:42:43] 2025-02-22 12:42:23,274 | INFO     | intersect: 895759159.6342471
[2025-02-22 13:42:43] 2025-02-22 12:42:23,274 | INFO     | chi2: 0.8293174648460736
[2025-02-22 13:42:43] 2025-02-22 12:42:23,274 | INFO     | current chi2=0.8293174648460736 (change=12.589096324752887 %)
[2025-02-22 13:42:43] 2025-02-22 12:42:23,274 | INFO     | left removable region: 30
[2025-02-22 13:42:43] 2025-02-22 12:42:23,275 | INFO     | model: linear, x: [1740209023.0, 1740209084.0, 1740209145.0, 1740209206.0, 1740209267.0, 1740209328.0, 1740209389.0, 1740209450.0, 1740209511.0, 1740209572.0, 1740
[2025-02-22 13:42:43] 2025-02-22 12:42:23,275 | INFO     | sum of square deviations: 9059954057.0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,277 | INFO     | sum of deviations: 15145215053.999996
[2025-02-22 13:42:43] 2025-02-22 12:42:23,277 | INFO     | mean x: 1740218386.5
[2025-02-22 13:42:43] 2025-02-22 12:42:23,278 | INFO     | mean y: 2370461.6233766233
[2025-02-22 13:42:43] 2025-02-22 12:42:23,278 | INFO     | -- intersect: -2906693043.406645
[2025-02-22 13:42:43] 2025-02-22 12:42:23,280 | INFO     | intersect: -2906693043.406645
[2025-02-22 13:42:43] 2025-02-22 12:42:23,280 | INFO     | chi2: 0.0009867704319630837
[2025-02-22 13:42:43] 2025-02-22 12:42:23,281 | INFO     | -- intersect: -2906693043.406645
[2025-02-22 13:42:43] 2025-02-22 12:42:23,281 | INFO     | current memory leak: 1.67 B/s (using 308 data points, chi2=0.00)
[2025-02-22 13:42:43] 2025-02-22 12:42:23,282 | INFO     | ..............................
[2025-02-22 13:42:43] 2025-02-22 12:42:23,282 | INFO     | . Timing measurements:
[2025-02-22 13:42:43] 2025-02-22 12:42:23,282 | INFO     | . get job = 0 s
[2025-02-22 13:42:43] 2025-02-22 12:42:23,282 | INFO     | . initial setup = 1 s
[2025-02-22 13:42:43] 2025-02-22 12:42:23,282 | INFO     | . payload setup = 8 s
[2025-02-22 13:42:43] 2025-02-22 12:42:23,282 | INFO     | . stage-in = 0 s
[2025-02-22 13:42:43] 2025-02-22 12:42:23,282 | INFO     | . payload execution = 20941 s
[2025-02-22 13:42:43] 2025-02-22 12:42:23,282 | INFO     | . stage-out = 1 s
[2025-02-22 13:42:43] 2025-02-22 12:42:23,282 | INFO     | . log creation = 0 s
[2025-02-22 13:42:43] 2025-02-22 12:42:23,282 | INFO     | ..............................
[2025-02-22 13:42:43] 2025-02-22 12:42:23,385 | INFO     | 
[2025-02-22 13:42:43] 2025-02-22 12:42:23,385 | INFO     | job summary report
[2025-02-22 13:42:43] 2025-02-22 12:42:23,385 | INFO     | --------------------------------------------------
[2025-02-22 13:42:43] 2025-02-22 12:42:23,385 | INFO     | PanDA job id: 6520204566
[2025-02-22 13:42:43] 2025-02-22 12:42:23,385 | INFO     | task id: 43205094
[2025-02-22 13:42:43] 2025-02-22 12:42:23,385 | INFO     | errors: (none)
[2025-02-22 13:42:43] 2025-02-22 12:42:23,385 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 13:42:43] 2025-02-22 12:42:23,385 | INFO     | pilot state: finished 
[2025-02-22 13:42:43] 2025-02-22 12:42:23,385 | INFO     | transexitcode: 0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | exeerrorcode: 0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | exeerrordiag: 
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | exitcode: 0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | exitmsg: OK
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | cpuconsumptiontime: 79962 s
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | nevents: 400
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | neventsw: 0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | pid: 1449052
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | pgrp: 1449052
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | corecount: 4
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | event service: False
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | sizes: {0: 2382529, 1: 2383396, 8: 2383602, 12: 2383630, 20953: 2416754, 20955: 2425717, 20956: 2425901, 20965: 2426071}
[2025-02-22 13:42:43] 2025-02-22 12:42:23,386 | INFO     | --------------------------------------------------
[2025-02-22 13:42:43] 2025-02-22 12:42:23,387 | INFO     | 
[2025-02-22 13:42:43] 2025-02-22 12:42:23,387 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-02-22 13:42:43] 2025-02-22 12:42:23,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,419 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 13:42:43] 2025-02-22 12:42:23,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,419 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 13:42:43] 2025-02-22 12:42:23,419 | INFO     | job 6520204566 has completed (purged errors)
[2025-02-22 13:42:43] 2025-02-22 12:42:23,419 | INFO     | overall cleanup function is called
[2025-02-22 13:42:43] 2025-02-22 12:42:24,428 | INFO     | --- collectZombieJob: --- 10, [1449052]
[2025-02-22 13:42:43] 2025-02-22 12:42:24,428 | INFO     | zombie collector waiting for pid 1449052
[2025-02-22 13:42:43] 2025-02-22 12:42:24,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 13:42:43] 2025-02-22 12:42:24,428 | INFO     | collected zombie processes
[2025-02-22 13:42:43] 2025-02-22 12:42:24,428 | INFO     | will attempt to kill all subprocesses of pid=1449052
[2025-02-22 13:42:43] 2025-02-22 12:42:24,779 | INFO     | process IDs to be killed: [1449052] (in reverse order)
[2025-02-22 13:42:43] 2025-02-22 12:42:25,035 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 13:42:43] 2025-02-22 12:42:25,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 13:42:43] 2025-02-22 12:42:25,062 | INFO     | did not find any defunct processes belonging to 1449052
[2025-02-22 13:42:43] 2025-02-22 12:42:25,083 | INFO     | did not find any defunct processes belonging to 1449052
[2025-02-22 13:42:43] 2025-02-22 12:42:25,084 | INFO     | ready for new job
[2025-02-22 13:42:43] 2025-02-22 12:42:25,084 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 13:42:43] 2025-02-22 12:42:25,087 | INFO     | **************************************
[2025-02-22 13:42:43] 2025-02-22 12:42:25,087 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 13:42:43] 2025-02-22 12:42:25,087 | INFO     | **************************************
[2025-02-22 13:42:43] 2025-02-22 12:42:25,087 | INFO     | 
[2025-02-22 13:42:43] 2025-02-22 12:42:25,095 | INFO     | architecture information:
[2025-02-22 13:42:43] 2025-02-22 12:42:25,096 | INFO     | executing command: cat /etc/os-release
[2025-02-22 13:42:43] 2025-02-22 12:42:25,120 | INFO     | cat /etc/os-release:
[2025-02-22 13:42:43] NAME="CentOS Linux"
[2025-02-22 13:42:43] VERSION="7 (Core)"
[2025-02-22 13:42:43] ID="centos"
[2025-02-22 13:42:43] ID_LIKE="rhel fedora"
[2025-02-22 13:42:43] VERSION_ID="7"
[2025-02-22 13:42:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 13:42:43] ANSI_COLOR="0;31"
[2025-02-22 13:42:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 13:42:43] HOME_URL="https://www.centos.org/"
[2025-02-22 13:42:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 13:42:43] 
[2025-02-22 13:42:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 13:42:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 13:42:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 13:42:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 13:42:43] 
[2025-02-22 13:42:43] 2025-02-22 12:42:25,121 | INFO     | **************************************
[2025-02-22 13:42:43] 2025-02-22 12:42:25,624 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-02-22 13:42:43] 2025-02-22 12:42:25,645 | INFO     | sufficient remaining disk space (3238722011136 B)
[2025-02-22 13:42:43] 2025-02-22 12:42:25,645 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 13:42:43] 2025-02-22 12:42:25,645 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 13:42:43] 2025-02-22 12:42:25,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 13:42:43] 2025-02-22 12:42:25,646 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 13:42:43] 2025-02-22 12:42:25,648 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 13:42:43] 2025-02-22 12:42:25,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 13:42:43] 2025-02-22 12:42:25,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 13:42:43] 2025-02-22 12:42:26,025 | INFO     | all data control threads have been joined
[2025-02-22 13:42:43] 2025-02-22 12:42:26,343 | INFO     | all payload control threads have been joined
[2025-02-22 13:42:43] 2025-02-22 12:42:26,438 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 13:42:43] 2025-02-22 12:42:26,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 13:42:43] 2025-02-22 12:42:26,512 | INFO     | aborting loop
[2025-02-22 13:42:43] 2025-02-22 12:42:26,651 | INFO     | [job] retrieve thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:26,792 | INFO     | [payload] validate_post thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:26,918 | INFO     | [payload] failed_post thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:27,030 | INFO     | [data] control thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:27,062 | INFO     | [job] validate thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:27,196 | INFO     | all job control threads have been joined
[2025-02-22 13:42:43] 2025-02-22 12:42:27,303 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:27,349 | INFO     | [payload] control thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:27,403 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:27,517 | INFO     | [job] job monitor thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:27,581 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:28,138 | INFO     | [data] copytool_in thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:28,202 | INFO     | [job] control thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:28,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 13:42:43] 2025-02-22 12:42:28,446 | INFO     | [data] copytool_out thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:29,400 | INFO     | [job] queue monitor thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:29,652 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:36,691 | INFO     | job.realtimelogging is not enabled
[2025-02-22 13:42:43] 2025-02-22 12:42:37,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 13:42:43] 2025-02-22 12:42:37,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23151027509056)>', '<ExcThread(monitor, started 23150794344192)>']
[2025-02-22 13:42:43] 2025-02-22 12:42:38,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 13:42:43] 2025-02-22 12:42:38,706 | INFO     | [monitor] control thread has ended
[2025-02-22 13:42:43] 2025-02-22 12:42:42,804 | INFO     | all workflow threads have been joined
[2025-02-22 13:42:43] 2025-02-22 12:42:42,805 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 13:42:43] 2025-02-22 12:42:42,805 | INFO     | traces error code: 0
[2025-02-22 13:42:43] 2025-02-22 12:42:42,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 13:42:43] 2025-02-22 12:42:42,992 [wrapper] ==== pilot stdout END ====
[2025-02-22 13:42:43] 2025-02-22 12:42:42,996 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 13:42:43] 2025-02-22 12:42:43,001 [wrapper] pilotpid: 1441253
[2025-02-22 13:42:43] 2025-02-22 12:42:43,007 [wrapper] Pilot exit status: 0
[2025-02-22 13:42:43] 2025-02-22 12:42:43,023 [wrapper] pandaids: 6520204566
[2025-02-22 13:42:43] 2025-02-22 12:42:43,176 [wrapper] cleanup supervisor_pilot 2981528 1441254
[2025-02-22 13:42:43] 2025-02-22 12:42:43,180 [wrapper] Test setup, not cleaning
[2025-02-22 13:42:43] 2025-02-22 12:42:43,189 [wrapper] apfmon messages muted
[2025-02-22 13:42:43] 2025-02-22 12:42:43,193 [wrapper] ==== wrapper stdout END ====
[2025-02-22 13:42:43] 2025-02-22 12:42:43,197 [wrapper] ==== wrapper stderr END ====
[2025-02-22 13:42:43]  *** Error codes and diagnostics ***
[2025-02-22 13:42:43]     "exeErrorCode": 0,
[2025-02-22 13:42:43]     "exeErrorDiag": "",
[2025-02-22 13:42:43]     "pilotErrorCode": 0,
[2025-02-22 13:42:43]     "pilotErrorDiag": "",
[2025-02-22 13:42:43]  *** Listing of results directory ***
[2025-02-22 13:42:43] total 667668
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc    491065 Feb 20 07:07 pilot3.tar.gz
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc      5118 Feb 20 07:10 queuedata.json
[2025-02-22 13:42:43] -rwx------ 1 boinc boinc     35865 Feb 20 07:11 runpilot2-wrapper.sh
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc       100 Feb 22 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 13:42:43] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 07:52 run_atlas
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc       105 Feb 22 07:52 job.xml
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc      6675 Feb 22 07:52 init_data.xml
[2025-02-22 13:42:43] -rw-r--r-- 2 boinc boinc 346278138 Feb 22 07:52 EVNT.43092757._001764.pool.root.1
[2025-02-22 13:42:43] -rw-r--r-- 2 boinc boinc     17569 Feb 22 07:52 start_atlas.sh
[2025-02-22 13:42:43] drwxrwx--x 2 boinc boinc      4096 Feb 22 07:52 shared
[2025-02-22 13:42:43] -rw-r--r-- 2 boinc boinc    503559 Feb 22 07:52 input.tar.gz
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc         0 Feb 22 07:52 boinc_lockfile
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc      2545 Feb 22 07:52 pandaJob.out
[2025-02-22 13:42:43] -rw------- 1 boinc boinc       424 Feb 22 07:52 setup.sh.local
[2025-02-22 13:42:43] -rw------- 1 boinc boinc    988025 Feb 22 07:52 agis_schedconf.cvmfs.json
[2025-02-22 13:42:43] drwx------ 4 boinc boinc      4096 Feb 22 07:52 pilot3
[2025-02-22 13:42:43] -rw------- 1 boinc boinc 327932936 Feb 22 13:41 HITS.43205094._024924.pool.root.1
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc       532 Feb 22 13:41 boinc_task_state.xml
[2025-02-22 13:42:43] -rw------- 1 boinc boinc        95 Feb 22 13:41 pilot_heartbeat.json
[2025-02-22 13:42:43] -rw------- 1 boinc boinc      1029 Feb 22 13:42 memory_monitor_summary.json
[2025-02-22 13:42:43] -rw------- 1 boinc boinc   1582569 Feb 22 13:42 agis_ddmendpoints.agis.ALL.json
[2025-02-22 13:42:43] -rw------- 1 boinc boinc    439380 Feb 22 13:42 log.43205094._024924.job.log.tgz.1
[2025-02-22 13:42:43] -rw------- 1 boinc boinc      7701 Feb 22 13:42 heartbeat.json
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc      8192 Feb 22 13:42 boinc_mmap_file
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc        28 Feb 22 13:42 wrapper_checkpoint.txt
[2025-02-22 13:42:43] -rw------- 1 boinc boinc      4421 Feb 22 13:42 pilotlog.txt
[2025-02-22 13:42:43] -rw------- 1 boinc boinc   2394081 Feb 22 13:42 log.43205094._024924.job.log.1
[2025-02-22 13:42:43] -rw------- 1 boinc boinc       357 Feb 22 13:42 output.list
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc       620 Feb 22 13:42 runtime_log
[2025-02-22 13:42:43] -rw------- 1 boinc boinc   2856960 Feb 22 13:42 result.tar.gz
[2025-02-22 13:42:43] -rw------- 1 boinc boinc       667 Feb 22 13:42 zf2KDmtxE56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPcpKDmnbNhkm.diag
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc     11424 Feb 22 13:42 runtime_log.err
[2025-02-22 13:42:43] -rw-r--r-- 1 boinc boinc     21336 Feb 22 13:42 stderr.txt
[2025-02-22 13:42:43] HITS file was successfully produced:
[2025-02-22 13:42:43] -rw------- 1 boinc boinc 327932936 Feb 22 13:41 shared/HITS.pool.root.1
[2025-02-22 13:42:43]  *** Contents of shared directory: ***
[2025-02-22 13:42:43] total 661724
[2025-02-22 13:42:43] -rw-r--r-- 2 boinc boinc 346278138 Feb 22 07:52 ATLAS.root_0
[2025-02-22 13:42:43] -rw-r--r-- 2 boinc boinc     17569 Feb 22 07:52 start_atlas.sh
[2025-02-22 13:42:43] -rw-r--r-- 2 boinc boinc    503559 Feb 22 07:52 input.tar.gz
[2025-02-22 13:42:43] -rw------- 1 boinc boinc 327932936 Feb 22 13:41 HITS.pool.root.1
[2025-02-22 13:42:43] -rw------- 1 boinc boinc   2856960 Feb 22 13:42 result.tar.gz
13:42:44 (1437262): run_atlas exited; CPU time 79630.167412
13:42:44 (1437262): called boinc_finish(0)

</stderr_txt>
]]>

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