Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:25 (2082224): wrapper (7.7.26015): starting
11:46:25 (2082224): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 11:46:25] Arguments: --nthreads 4
[2025-02-22 11:46:25] Threads: 4
[2025-02-22 11:46:25] Checking for CVMFS
[2025-02-22 11:46:25] No cvmfs_config command found, will try listing directly
[2025-02-22 11:46:25] CVMFS is ok
[2025-02-22 11:46:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 11:46:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 11:46:25] Further information can be found at the LHC@home message board.
[2025-02-22 11:46:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 11:46:25] Checking for apptainer binary...
[2025-02-22 11:46:25] which: no apptainer in ((null))
[2025-02-22 11:46:25] apptainer is not installed, using version from CVMFS
[2025-02-22 11:46:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 11:46:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-02-22 11:46:25] apptainer works
[2025-02-22 11:46:25] Set ATHENA_PROC_NUMBER=4
[2025-02-22 11:46:25] Set ATHENA_CORE_NUMBER=4
[2025-02-22 11:46:25] Starting ATLAS job with PandaID=6519938541
[2025-02-22 11:46:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 19:56:56]  *** The last 200 lines of the pilot log: ***
[2025-02-22 19:56:56] 2025-02-22 18:56:37,952 | INFO     | fitting pss+swap vs Time
[2025-02-22 19:56:56] 2025-02-22 18:56:37,953 | INFO     | model: linear, x: [1740221220.0, 1740221281.0, 1740221342.0, 1740221403.0, 1740221464.0, 1740221525.0, 1740221586.0, 1740221647.0, 1740221708.0, 1740221769.0, 1740
[2025-02-22 19:56:56] 2025-02-22 18:56:37,953 | INFO     | sum of square deviations: 34723034300.5
[2025-02-22 19:56:56] 2025-02-22 18:56:37,960 | INFO     | sum of deviations: 168727312323.5
[2025-02-22 19:56:56] 2025-02-22 18:56:37,960 | INFO     | mean x: 1740235890.5
[2025-02-22 19:56:56] 2025-02-22 18:56:37,960 | INFO     | mean y: 2359233.885892116
[2025-02-22 19:56:56] 2025-02-22 18:56:37,960 | INFO     | -- intersect: -8453852342.322168
[2025-02-22 19:56:56] 2025-02-22 18:56:37,960 | INFO     | intersect: -8453852342.322168
[2025-02-22 19:56:56] 2025-02-22 18:56:37,961 | INFO     | chi2: 3.624297565689461
[2025-02-22 19:56:56] 2025-02-22 18:56:37,962 | INFO     | model: linear, x: [1740221220.0, 1740221281.0, 1740221342.0, 1740221403.0, 1740221464.0, 1740221525.0, 1740221586.0, 1740221647.0, 1740221708.0, 1740221769.0, 1740
[2025-02-22 19:56:56] 2025-02-22 18:56:37,962 | INFO     | sum of square deviations: 33653609598.0
[2025-02-22 19:56:56] 2025-02-22 18:56:37,969 | INFO     | sum of deviations: 194926749402.00006
[2025-02-22 19:56:56] 2025-02-22 18:56:37,969 | INFO     | mean x: 1740235738.0
[2025-02-22 19:56:56] 2025-02-22 18:56:37,969 | INFO     | mean y: 2362935.846960168
[2025-02-22 19:56:56] 2025-02-22 18:56:37,969 | INFO     | -- intersect: -10077343213.168629
[2025-02-22 19:56:56] 2025-02-22 18:56:37,969 | INFO     | intersect: -10077343213.168629
[2025-02-22 19:56:56] 2025-02-22 18:56:37,970 | INFO     | chi2: 2.961403553900855
[2025-02-22 19:56:56] 2025-02-22 18:56:37,970 | INFO     | current chi2=2.961403553900855 (change=18.29027555750659 %)
[2025-02-22 19:56:56] 2025-02-22 18:56:37,970 | INFO     | right removable region: 476
[2025-02-22 19:56:56] 2025-02-22 18:56:37,971 | INFO     | model: linear, x: [1740221525.0, 1740221586.0, 1740221647.0, 1740221708.0, 1740221769.0, 1740221830.0, 1740221891.0, 1740221952.0, 1740222013.0, 1740222074.0, 1740
[2025-02-22 19:56:56] 2025-02-22 18:56:37,972 | INFO     | sum of square deviations: 33653609598.0
[2025-02-22 19:56:56] 2025-02-22 18:56:37,978 | INFO     | sum of deviations: 68188671270.00001
[2025-02-22 19:56:56] 2025-02-22 18:56:37,978 | INFO     | mean x: 1740236043.0
[2025-02-22 19:56:56] 2025-02-22 18:56:37,978 | INFO     | mean y: 2373543.932914046
[2025-02-22 19:56:56] 2025-02-22 18:56:37,978 | INFO     | -- intersect: -3523678635.4857445
[2025-02-22 19:56:56] 2025-02-22 18:56:37,979 | INFO     | intersect: -3523678635.4857445
[2025-02-22 19:56:56] 2025-02-22 18:56:37,979 | INFO     | chi2: 1.6760089567875895
[2025-02-22 19:56:56] 2025-02-22 18:56:37,979 | INFO     | current chi2=1.6760089567875895 (change=53.75630928723819 %)
[2025-02-22 19:56:56] 2025-02-22 18:56:37,980 | INFO     | model: linear, x: [1740221830.0, 1740221891.0, 1740221952.0, 1740222013.0, 1740222074.0, 1740222135.0, 1740222196.0, 1740222257.0, 1740222318.0, 1740222379.0, 1740
[2025-02-22 19:56:56] 2025-02-22 18:56:37,981 | INFO     | sum of square deviations: 32606371358.0
[2025-02-22 19:56:56] 2025-02-22 18:56:37,987 | INFO     | sum of deviations: -2013779091.9999962
[2025-02-22 19:56:56] 2025-02-22 18:56:37,987 | INFO     | mean x: 1740236195.5
[2025-02-22 19:56:56] 2025-02-22 18:56:37,987 | INFO     | mean y: 2383766.63559322
[2025-02-22 19:56:56] 2025-02-22 18:56:37,987 | INFO     | -- intersect: 109861266.26787591
[2025-02-22 19:56:56] 2025-02-22 18:56:37,987 | INFO     | intersect: 109861266.26787591
[2025-02-22 19:56:56] 2025-02-22 18:56:37,988 | INFO     | chi2: 0.8508555639134594
[2025-02-22 19:56:56] 2025-02-22 18:56:37,988 | INFO     | current chi2=0.8508555639134594 (change=49.23323288532441 %)
[2025-02-22 19:56:56] 2025-02-22 18:56:37,989 | INFO     | model: linear, x: [1740222135.0, 1740222196.0, 1740222257.0, 1740222318.0, 1740222379.0, 1740222440.0, 1740222501.0, 1740222562.0, 1740222623.0, 1740222684.0, 1740
[2025-02-22 19:56:56] 2025-02-22 18:56:37,989 | INFO     | sum of square deviations: 31581087018.0
[2025-02-22 19:56:56] 2025-02-22 18:56:37,996 | INFO     | sum of deviations: -3315055492.000004
[2025-02-22 19:56:56] 2025-02-22 18:56:37,996 | INFO     | mean x: 1740236348.0
[2025-02-22 19:56:56] 2025-02-22 18:56:37,996 | INFO     | mean y: 2383949.2976445397
[2025-02-22 19:56:56] 2025-02-22 18:56:37,996 | INFO     | -- intersect: 185055940.90855184
[2025-02-22 19:56:56] 2025-02-22 18:56:37,996 | INFO     | intersect: 185055940.90855184
[2025-02-22 19:56:56] 2025-02-22 18:56:37,997 | INFO     | chi2: 0.8240475339281988
[2025-02-22 19:56:56] 2025-02-22 18:56:37,997 | INFO     | current chi2=0.8240475339281988 (change=3.1507145421907587 %)
[2025-02-22 19:56:56] 2025-02-22 18:56:37,997 | INFO     | left removable region: 30
[2025-02-22 19:56:56] 2025-02-22 18:56:37,998 | INFO     | model: linear, x: [1740223050.0, 1740223111.0, 1740223172.0, 1740223233.0, 1740223294.0, 1740223355.0, 1740223416.0, 1740223477.0, 1740223538.0, 1740223599.0, 1740
[2025-02-22 19:56:56] 2025-02-22 18:56:37,998 | INFO     | sum of square deviations: 27509380907.5
[2025-02-22 19:56:56] 2025-02-22 18:56:38,004 | INFO     | sum of deviations: 48166070523.499985
[2025-02-22 19:56:56] 2025-02-22 18:56:38,004 | INFO     | mean x: 1740236622.5
[2025-02-22 19:56:56] 2025-02-22 18:56:38,004 | INFO     | mean y: 2384206.3295964124
[2025-02-22 19:56:56] 2025-02-22 18:56:38,005 | INFO     | -- intersect: -3044589484.890773
[2025-02-22 19:56:56] 2025-02-22 18:56:38,005 | INFO     | intersect: -3044589484.890773
[2025-02-22 19:56:56] 2025-02-22 18:56:38,005 | INFO     | chi2: 0.0047117341155809575
[2025-02-22 19:56:56] 2025-02-22 18:56:38,006 | INFO     | -- intersect: -3044589484.890773
[2025-02-22 19:56:56] 2025-02-22 18:56:38,006 | INFO     | current memory leak: 1.75 B/s (using 446 data points, chi2=0.00)
[2025-02-22 19:56:56] 2025-02-22 18:56:38,007 | INFO     | ..............................
[2025-02-22 19:56:56] 2025-02-22 18:56:38,007 | INFO     | . Timing measurements:
[2025-02-22 19:56:56] 2025-02-22 18:56:38,007 | INFO     | . get job = 0 s
[2025-02-22 19:56:56] 2025-02-22 18:56:38,007 | INFO     | . initial setup = 1 s
[2025-02-22 19:56:56] 2025-02-22 18:56:38,007 | INFO     | . payload setup = 5 s
[2025-02-22 19:56:56] 2025-02-22 18:56:38,007 | INFO     | . stage-in = 0 s
[2025-02-22 19:56:56] 2025-02-22 18:56:38,007 | INFO     | . payload execution = 29370 s
[2025-02-22 19:56:56] 2025-02-22 18:56:38,008 | INFO     | . stage-out = 1 s
[2025-02-22 19:56:56] 2025-02-22 18:56:38,008 | INFO     | . log creation = 0 s
[2025-02-22 19:56:56] 2025-02-22 18:56:38,008 | INFO     | ..............................
[2025-02-22 19:56:56] 2025-02-22 18:56:38,411 | INFO     | 
[2025-02-22 19:56:56] 2025-02-22 18:56:38,412 | INFO     | job summary report
[2025-02-22 19:56:56] 2025-02-22 18:56:38,412 | INFO     | --------------------------------------------------
[2025-02-22 19:56:56] 2025-02-22 18:56:38,412 | INFO     | PanDA job id: 6519938541
[2025-02-22 19:56:56] 2025-02-22 18:56:38,412 | INFO     | task id: 43205075
[2025-02-22 19:56:56] 2025-02-22 18:56:38,412 | INFO     | errors: (none)
[2025-02-22 19:56:56] 2025-02-22 18:56:38,412 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 19:56:56] 2025-02-22 18:56:38,412 | INFO     | pilot state: finished 
[2025-02-22 19:56:56] 2025-02-22 18:56:38,412 | INFO     | transexitcode: 0
[2025-02-22 19:56:56] 2025-02-22 18:56:38,413 | INFO     | exeerrorcode: 0
[2025-02-22 19:56:56] 2025-02-22 18:56:38,413 | INFO     | exeerrordiag: 
[2025-02-22 19:56:56] 2025-02-22 18:56:38,413 | INFO     | exitcode: 0
[2025-02-22 19:56:56] 2025-02-22 18:56:38,413 | INFO     | exitmsg: OK
[2025-02-22 19:56:56] 2025-02-22 18:56:38,413 | INFO     | cpuconsumptiontime: 112249 s
[2025-02-22 19:56:56] 2025-02-22 18:56:38,413 | INFO     | nevents: 400
[2025-02-22 19:56:56] 2025-02-22 18:56:38,413 | INFO     | neventsw: 0
[2025-02-22 19:56:56] 2025-02-22 18:56:38,413 | INFO     | pid: 2092624
[2025-02-22 19:56:56] 2025-02-22 18:56:38,413 | INFO     | pgrp: 2092624
[2025-02-22 19:56:56] 2025-02-22 18:56:38,413 | INFO     | corecount: 4
[2025-02-22 19:56:56] 2025-02-22 18:56:38,414 | INFO     | event service: False
[2025-02-22 19:56:56] 2025-02-22 18:56:38,414 | INFO     | sizes: {0: 2383152, 1: 2383351, 5: 2383557, 11: 2383613, 29380: 2421070, 29381: 2430033, 29383: 2430217, 29388: 2430387}
[2025-02-22 19:56:56] 2025-02-22 18:56:38,414 | INFO     | --------------------------------------------------
[2025-02-22 19:56:56] 2025-02-22 18:56:38,414 | INFO     | 
[2025-02-22 19:56:56] 2025-02-22 18:56:38,414 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-02-22 19:56:56] 2025-02-22 18:56:38,432 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,432 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,432 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,432 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,434 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 19:56:56] 2025-02-22 18:56:38,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,434 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 19:56:56] 2025-02-22 18:56:38,434 | INFO     | job 6519938541 has completed (purged errors)
[2025-02-22 19:56:56] 2025-02-22 18:56:38,434 | INFO     | overall cleanup function is called
[2025-02-22 19:56:56] 2025-02-22 18:56:39,442 | INFO     | --- collectZombieJob: --- 10, [2092624]
[2025-02-22 19:56:56] 2025-02-22 18:56:39,442 | INFO     | zombie collector waiting for pid 2092624
[2025-02-22 19:56:56] 2025-02-22 18:56:39,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 19:56:56] 2025-02-22 18:56:39,443 | INFO     | collected zombie processes
[2025-02-22 19:56:56] 2025-02-22 18:56:39,443 | INFO     | will attempt to kill all subprocesses of pid=2092624
[2025-02-22 19:56:56] 2025-02-22 18:56:39,553 | INFO     | process IDs to be killed: [2092624] (in reverse order)
[2025-02-22 19:56:56] 2025-02-22 18:56:39,635 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 19:56:56] 2025-02-22 18:56:39,635 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 19:56:56] 2025-02-22 18:56:39,642 | INFO     | did not find any defunct processes belonging to 2092624
[2025-02-22 19:56:56] 2025-02-22 18:56:39,649 | INFO     | did not find any defunct processes belonging to 2092624
[2025-02-22 19:56:56] 2025-02-22 18:56:39,649 | INFO     | ready for new job
[2025-02-22 19:56:56] 2025-02-22 18:56:39,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 19:56:56] 2025-02-22 18:56:39,652 | INFO     | **************************************
[2025-02-22 19:56:56] 2025-02-22 18:56:39,652 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 19:56:56] 2025-02-22 18:56:39,652 | INFO     | **************************************
[2025-02-22 19:56:56] 2025-02-22 18:56:39,652 | INFO     | 
[2025-02-22 19:56:56] 2025-02-22 18:56:39,655 | INFO     | architecture information:
[2025-02-22 19:56:56] 2025-02-22 18:56:39,655 | INFO     | executing command: cat /etc/os-release
[2025-02-22 19:56:56] 2025-02-22 18:56:39,668 | INFO     | cat /etc/os-release:
[2025-02-22 19:56:56] NAME="CentOS Linux"
[2025-02-22 19:56:56] VERSION="7 (Core)"
[2025-02-22 19:56:56] ID="centos"
[2025-02-22 19:56:56] ID_LIKE="rhel fedora"
[2025-02-22 19:56:56] VERSION_ID="7"
[2025-02-22 19:56:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 19:56:56] ANSI_COLOR="0;31"
[2025-02-22 19:56:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 19:56:56] HOME_URL="https://www.centos.org/"
[2025-02-22 19:56:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 19:56:56] 
[2025-02-22 19:56:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 19:56:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 19:56:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 19:56:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 19:56:56] 
[2025-02-22 19:56:56] 2025-02-22 18:56:39,668 | INFO     | **************************************
[2025-02-22 19:56:56] 2025-02-22 18:56:40,170 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-02-22 19:56:56] 2025-02-22 18:56:40,183 | INFO     | sufficient remaining disk space (1641793191936 B)
[2025-02-22 19:56:56] 2025-02-22 18:56:40,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 19:56:56] 2025-02-22 18:56:40,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 19:56:56] 2025-02-22 18:56:40,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 19:56:56] 2025-02-22 18:56:40,359 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-22 19:56:56] 2025-02-22 18:56:40,359 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-22 19:56:56] 2025-02-22 18:56:40,359 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 19:56:56] 2025-02-22 18:56:40,359 | INFO     | will abort loop
[2025-02-22 19:56:56] 2025-02-22 18:56:40,811 | INFO     | all job control threads have been joined
[2025-02-22 19:56:56] 2025-02-22 18:56:40,993 | INFO     | all data control threads have been joined
[2025-02-22 19:56:56] 2025-02-22 18:56:41,090 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 19:56:56] 2025-02-22 18:56:41,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 19:56:56] 2025-02-22 18:56:41,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 19:56:56] 2025-02-22 18:56:41,188 | INFO     | [job] retrieve thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:41,365 | INFO     | [job] job monitor thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:41,478 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:41,479 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:41,596 | INFO     | all payload control threads have been joined
[2025-02-22 19:56:56] 2025-02-22 18:56:41,723 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:41,816 | INFO     | [job] control thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:41,997 | INFO     | [data] control thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:42,187 | INFO     | [data] copytool_out thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:42,231 | INFO     | [payload] validate_post thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:42,358 | INFO     | [payload] failed_post thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:42,367 | INFO     | [job] validate thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:42,496 | INFO     | [data] copytool_in thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:42,602 | INFO     | [payload] control thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:43,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 19:56:56] 2025-02-22 18:56:43,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 19:56:56] 2025-02-22 18:56:44,130 | INFO     | [job] queue monitor thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:47,083 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:50,519 | INFO     | job.realtimelogging is not enabled
[2025-02-22 19:56:56] 2025-02-22 18:56:51,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 19:56:56] 2025-02-22 18:56:51,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22425150551872)>', '<ExcThread(monitor, started 22424915506944)>']
[2025-02-22 19:56:56] 2025-02-22 18:56:52,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 19:56:56] 2025-02-22 18:56:52,138 | INFO     | [monitor] control thread has ended
[2025-02-22 19:56:56] 2025-02-22 18:56:56,557 | INFO     | all workflow threads have been joined
[2025-02-22 19:56:56] 2025-02-22 18:56:56,557 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 19:56:56] 2025-02-22 18:56:56,558 | INFO     | traces error code: 0
[2025-02-22 19:56:56] 2025-02-22 18:56:56,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 19:56:56] 2025-02-22 18:56:56,677 [wrapper] ==== pilot stdout END ====
[2025-02-22 19:56:56] 2025-02-22 18:56:56,679 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 19:56:56] 2025-02-22 18:56:56,681 [wrapper] pilotpid: 2085834
[2025-02-22 19:56:56] 2025-02-22 18:56:56,683 [wrapper] Pilot exit status: 0
[2025-02-22 19:56:56] 2025-02-22 18:56:56,692 [wrapper] pandaids: 6519938541
[2025-02-22 19:56:56] 2025-02-22 18:56:56,739 [wrapper] cleanup supervisor_pilot 2752661 2085835
[2025-02-22 19:56:56] 2025-02-22 18:56:56,742 [wrapper] Test setup, not cleaning
[2025-02-22 19:56:56] 2025-02-22 18:56:56,746 [wrapper] apfmon messages muted
[2025-02-22 19:56:56] 2025-02-22 18:56:56,748 [wrapper] ==== wrapper stdout END ====
[2025-02-22 19:56:56] 2025-02-22 18:56:56,751 [wrapper] ==== wrapper stderr END ====
[2025-02-22 19:56:56]  *** Error codes and diagnostics ***
[2025-02-22 19:56:56]     "exeErrorCode": 0,
[2025-02-22 19:56:56]     "exeErrorDiag": "",
[2025-02-22 19:56:56]     "pilotErrorCode": 0,
[2025-02-22 19:56:56]     "pilotErrorDiag": "",
[2025-02-22 19:56:56]  *** Listing of results directory ***
[2025-02-22 19:56:56] total 660124
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc    491065 Feb 20 02:32 pilot3.tar.gz
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc      5118 Feb 20 02:48 queuedata.json
[2025-02-22 19:56:56] -rwx------ 1 boinc boinc     35865 Feb 20 02:49 runpilot2-wrapper.sh
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc       100 Feb 22 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 19:56:56] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 11:46 run_atlas
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc       105 Feb 22 11:46 job.xml
[2025-02-22 19:56:56] -rw-r--r-- 2 boinc boinc 341661620 Feb 22 11:46 EVNT.43092757._000624.pool.root.1
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc      6420 Feb 22 11:46 init_data.xml
[2025-02-22 19:56:56] drwxrwx--x 2 boinc boinc      4096 Feb 22 11:46 shared
[2025-02-22 19:56:56] -rw-r--r-- 2 boinc boinc    503558 Feb 22 11:46 input.tar.gz
[2025-02-22 19:56:56] -rw-r--r-- 2 boinc boinc     17569 Feb 22 11:46 start_atlas.sh
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc         0 Feb 22 11:46 boinc_lockfile
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc      2550 Feb 22 11:46 pandaJob.out
[2025-02-22 19:56:56] -rw------- 1 boinc boinc       424 Feb 22 11:46 setup.sh.local
[2025-02-22 19:56:56] -rw------- 1 boinc boinc    988064 Feb 22 11:46 agis_schedconf.cvmfs.json
[2025-02-22 19:56:56] drwx------ 4 boinc boinc      4096 Feb 22 11:46 pilot3
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc       532 Feb 22 19:55 boinc_task_state.xml
[2025-02-22 19:56:56] -rw------- 1 boinc boinc 322769274 Feb 22 19:55 HITS.43205075._053420.pool.root.1
[2025-02-22 19:56:56] -rw------- 1 boinc boinc        95 Feb 22 19:56 pilot_heartbeat.json
[2025-02-22 19:56:56] -rw------- 1 boinc boinc      1041 Feb 22 19:56 memory_monitor_summary.json
[2025-02-22 19:56:56] -rw------- 1 boinc boinc   1582569 Feb 22 19:56 agis_ddmendpoints.agis.ALL.json
[2025-02-22 19:56:56] -rw------- 1 boinc boinc    511990 Feb 22 19:56 log.43205075._053420.job.log.tgz.1
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc        29 Feb 22 19:56 wrapper_checkpoint.txt
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc      8192 Feb 22 19:56 boinc_mmap_file
[2025-02-22 19:56:56] -rw------- 1 boinc boinc      7749 Feb 22 19:56 heartbeat.json
[2025-02-22 19:56:56] -rw------- 1 boinc boinc      4484 Feb 22 19:56 pilotlog.txt
[2025-02-22 19:56:56] -rw------- 1 boinc boinc   3353349 Feb 22 19:56 log.43205075._053420.job.log.1
[2025-02-22 19:56:56] -rw------- 1 boinc boinc       357 Feb 22 19:56 output.list
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc       620 Feb 22 19:56 runtime_log
[2025-02-22 19:56:56] -rw------- 1 boinc boinc   3880960 Feb 22 19:56 result.tar.gz
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc     11424 Feb 22 19:56 runtime_log.err
[2025-02-22 19:56:56] -rw------- 1 boinc boinc       667 Feb 22 19:56 Ef5NDmjrA56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmODpKDmLTGRun.diag
[2025-02-22 19:56:56] -rw-r--r-- 1 boinc boinc     21327 Feb 22 19:56 stderr.txt
[2025-02-22 19:56:56] HITS file was successfully produced:
[2025-02-22 19:56:56] -rw------- 1 boinc boinc 322769274 Feb 22 19:55 shared/HITS.pool.root.1
[2025-02-22 19:56:56]  *** Contents of shared directory: ***
[2025-02-22 19:56:56] total 653176
[2025-02-22 19:56:56] -rw-r--r-- 2 boinc boinc 341661620 Feb 22 11:46 ATLAS.root_0
[2025-02-22 19:56:56] -rw-r--r-- 2 boinc boinc    503558 Feb 22 11:46 input.tar.gz
[2025-02-22 19:56:56] -rw-r--r-- 2 boinc boinc     17569 Feb 22 11:46 start_atlas.sh
[2025-02-22 19:56:56] -rw------- 1 boinc boinc 322769274 Feb 22 19:55 HITS.pool.root.1
[2025-02-22 19:56:56] -rw------- 1 boinc boinc   3880960 Feb 22 19:56 result.tar.gz
19:56:58 (2082224): run_atlas exited; CPU time 112357.397809
19:56:58 (2082224): called boinc_finish(0)

</stderr_txt>
]]>

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