Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:45:54 (2072179): wrapper (7.7.26015): starting
18:45:54 (2072179): wrapper: running run_atlas (--nthreads 4)
[2025-02-21 18:45:54] Arguments: --nthreads 4
[2025-02-21 18:45:54] Threads: 4
[2025-02-21 18:45:54] Checking for CVMFS
[2025-02-21 18:45:54] No cvmfs_config command found, will try listing directly
[2025-02-21 18:45:54] CVMFS is ok
[2025-02-21 18:45:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 18:45:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 18:45:54] Further information can be found at the LHC@home message board.
[2025-02-21 18:45:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 18:45:54] Checking for apptainer binary...
[2025-02-21 18:45:54] which: no apptainer in ((null))
[2025-02-21 18:45:54] apptainer is not installed, using version from CVMFS
[2025-02-21 18:45:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 18:45:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-02-21 18:45:54] apptainer works
[2025-02-21 18:45:54] Set ATHENA_PROC_NUMBER=4
[2025-02-21 18:45:54] Set ATHENA_CORE_NUMBER=4
[2025-02-21 18:45:54] Starting ATLAS job with PandaID=6519783507
[2025-02-21 18:45:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 01:07:52]  *** The last 200 lines of the pilot log: ***
[2025-02-22 01:07:52] 2025-02-22 00:07:31,027 | INFO     | sum of square deviations: 16351934500.0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,031 | INFO     | sum of deviations: 178570128332.99997
[2025-02-22 01:07:52] 2025-02-22 00:07:31,031 | INFO     | mean x: 1740171403.0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,031 | INFO     | mean y: 2325705.7386666667
[2025-02-22 01:07:52] 2025-02-22 00:07:31,031 | INFO     | -- intersect: -19001091336.76029
[2025-02-22 01:07:52] 2025-02-22 00:07:31,031 | INFO     | intersect: -19001091336.76029
[2025-02-22 01:07:52] 2025-02-22 00:07:31,032 | INFO     | chi2: 5.06913573340528
[2025-02-22 01:07:52] 2025-02-22 00:07:31,032 | INFO     | model: linear, x: [1740159996.0, 1740160057.0, 1740160118.0, 1740160179.0, 1740160240.0, 1740160301.0, 1740160362.0, 1740160423.0, 1740160484.0, 1740160545.0, 1740
[2025-02-22 01:07:52] 2025-02-22 00:07:31,032 | INFO     | sum of square deviations: 15706536352.5
[2025-02-22 01:07:52] 2025-02-22 00:07:31,036 | INFO     | sum of deviations: 200072529573.99997
[2025-02-22 01:07:52] 2025-02-22 00:07:31,036 | INFO     | mean x: 1740171250.5
[2025-02-22 01:07:52] 2025-02-22 00:07:31,036 | INFO     | mean y: 2330724.891891892
[2025-02-22 01:07:52] 2025-02-22 00:07:31,036 | INFO     | -- intersect: -22164266427.13197
[2025-02-22 01:07:52] 2025-02-22 00:07:31,036 | INFO     | intersect: -22164266427.13197
[2025-02-22 01:07:52] 2025-02-22 00:07:31,037 | INFO     | chi2: 4.276692189666867
[2025-02-22 01:07:52] 2025-02-22 00:07:31,037 | INFO     | current chi2=4.276692189666867 (change=15.632715031011319 %)
[2025-02-22 01:07:52] 2025-02-22 00:07:31,037 | INFO     | right removable region: 369
[2025-02-22 01:07:52] 2025-02-22 00:07:31,038 | INFO     | model: linear, x: [1740160301.0, 1740160362.0, 1740160423.0, 1740160484.0, 1740160545.0, 1740160606.0, 1740160667.0, 1740160728.0, 1740160789.0, 1740160850.0, 1740
[2025-02-22 01:07:52] 2025-02-22 00:07:31,040 | INFO     | sum of square deviations: 15706536352.5
[2025-02-22 01:07:52] 2025-02-22 00:07:31,043 | INFO     | sum of deviations: 87163253251.0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,043 | INFO     | mean x: 1740171555.5
[2025-02-22 01:07:52] 2025-02-22 00:07:31,044 | INFO     | mean y: 2347273.448648649
[2025-02-22 01:07:52] 2025-02-22 00:07:31,044 | INFO     | -- intersect: -9654715912.738194
[2025-02-22 01:07:52] 2025-02-22 00:07:31,044 | INFO     | intersect: -9654715912.738194
[2025-02-22 01:07:52] 2025-02-22 00:07:31,044 | INFO     | chi2: 2.4949892311191117
[2025-02-22 01:07:52] 2025-02-22 00:07:31,044 | INFO     | current chi2=2.4949892311191117 (change=50.78077679638182 %)
[2025-02-22 01:07:52] 2025-02-22 00:07:31,045 | INFO     | model: linear, x: [1740160606.0, 1740160667.0, 1740160728.0, 1740160789.0, 1740160850.0, 1740160911.0, 1740160972.0, 1740161033.0, 1740161094.0, 1740161155.0, 1740
[2025-02-22 01:07:52] 2025-02-22 00:07:31,045 | INFO     | sum of square deviations: 15078347830.0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,049 | INFO     | sum of deviations: 11925292844.0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,049 | INFO     | mean x: 1740171708.0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,049 | INFO     | mean y: 2365538.805479452
[2025-02-22 01:07:52] 2025-02-22 00:07:31,049 | INFO     | -- intersect: -1373916362.2828612
[2025-02-22 01:07:52] 2025-02-22 00:07:31,049 | INFO     | intersect: -1373916362.2828612
[2025-02-22 01:07:52] 2025-02-22 00:07:31,050 | INFO     | chi2: 0.8851736137921984
[2025-02-22 01:07:52] 2025-02-22 00:07:31,050 | INFO     | current chi2=0.8851736137921984 (change=64.52194651777478 %)
[2025-02-22 01:07:52] 2025-02-22 00:07:31,050 | INFO     | model: linear, x: [1740160911.0, 1740160972.0, 1740161033.0, 1740161094.0, 1740161155.0, 1740161216.0, 1740161277.0, 1740161338.0, 1740161399.0, 1740161460.0, 1740
[2025-02-22 01:07:52] 2025-02-22 00:07:31,050 | INFO     | sum of square deviations: 14467136370.0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,054 | INFO     | sum of deviations: -247287412.0000038
[2025-02-22 01:07:52] 2025-02-22 00:07:31,054 | INFO     | mean x: 1740171860.5
[2025-02-22 01:07:52] 2025-02-22 00:07:31,054 | INFO     | mean y: 2368559.55
[2025-02-22 01:07:52] 2025-02-22 00:07:31,054 | INFO     | -- intersect: 32113395.34975245
[2025-02-22 01:07:52] 2025-02-22 00:07:31,054 | INFO     | intersect: 32113395.34975245
[2025-02-22 01:07:52] 2025-02-22 00:07:31,055 | INFO     | chi2: 0.8226397462121035
[2025-02-22 01:07:52] 2025-02-22 00:07:31,055 | INFO     | current chi2=0.8226397462121035 (change=7.064587850985723 %)
[2025-02-22 01:07:52] 2025-02-22 00:07:31,055 | INFO     | left removable region: 30
[2025-02-22 01:07:52] 2025-02-22 00:07:31,055 | INFO     | model: linear, x: [1740161826.0, 1740161887.0, 1740161948.0, 1740162009.0, 1740162070.0, 1740162131.0, 1740162192.0, 1740162253.0, 1740162314.0, 1740162375.0, 1740
[2025-02-22 01:07:52] 2025-02-22 00:07:31,057 | INFO     | sum of square deviations: 12080189290.0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,060 | INFO     | sum of deviations: 16807680444.999964
[2025-02-22 01:07:52] 2025-02-22 00:07:31,060 | INFO     | mean x: 1740172135.0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,060 | INFO     | mean y: 2375955.4837758113
[2025-02-22 01:07:52] 2025-02-22 00:07:31,060 | INFO     | -- intersect: -2418799446.840846
[2025-02-22 01:07:52] 2025-02-22 00:07:31,060 | INFO     | intersect: -2418799446.840846
[2025-02-22 01:07:52] 2025-02-22 00:07:31,060 | INFO     | chi2: 0.0016104045392323547
[2025-02-22 01:07:52] 2025-02-22 00:07:31,061 | INFO     | -- intersect: -2418799446.840846
[2025-02-22 01:07:52] 2025-02-22 00:07:31,061 | INFO     | current memory leak: 1.39 B/s (using 339 data points, chi2=0.00)
[2025-02-22 01:07:52] 2025-02-22 00:07:31,062 | INFO     | ..............................
[2025-02-22 01:07:52] 2025-02-22 00:07:31,062 | INFO     | . Timing measurements:
[2025-02-22 01:07:52] 2025-02-22 00:07:31,062 | INFO     | . get job = 0 s
[2025-02-22 01:07:52] 2025-02-22 00:07:31,062 | INFO     | . initial setup = 1 s
[2025-02-22 01:07:52] 2025-02-22 00:07:31,062 | INFO     | . payload setup = 6 s
[2025-02-22 01:07:52] 2025-02-22 00:07:31,062 | INFO     | . stage-in = 0 s
[2025-02-22 01:07:52] 2025-02-22 00:07:31,063 | INFO     | . payload execution = 22847 s
[2025-02-22 01:07:52] 2025-02-22 00:07:31,063 | INFO     | . stage-out = 1 s
[2025-02-22 01:07:52] 2025-02-22 00:07:31,063 | INFO     | . log creation = 0 s
[2025-02-22 01:07:52] 2025-02-22 00:07:31,063 | INFO     | ..............................
[2025-02-22 01:07:52] 2025-02-22 00:07:31,171 | INFO     | 
[2025-02-22 01:07:52] 2025-02-22 00:07:31,171 | INFO     | job summary report
[2025-02-22 01:07:52] 2025-02-22 00:07:31,171 | INFO     | --------------------------------------------------
[2025-02-22 01:07:52] 2025-02-22 00:07:31,171 | INFO     | PanDA job id: 6519783507
[2025-02-22 01:07:52] 2025-02-22 00:07:31,172 | INFO     | task id: 43205075
[2025-02-22 01:07:52] 2025-02-22 00:07:31,172 | INFO     | errors: (none)
[2025-02-22 01:07:52] 2025-02-22 00:07:31,172 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 01:07:52] 2025-02-22 00:07:31,172 | INFO     | pilot state: finished 
[2025-02-22 01:07:52] 2025-02-22 00:07:31,172 | INFO     | transexitcode: 0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,172 | INFO     | exeerrorcode: 0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,172 | INFO     | exeerrordiag: 
[2025-02-22 01:07:52] 2025-02-22 00:07:31,172 | INFO     | exitcode: 0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,172 | INFO     | exitmsg: OK
[2025-02-22 01:07:52] 2025-02-22 00:07:31,172 | INFO     | cpuconsumptiontime: 85817 s
[2025-02-22 01:07:52] 2025-02-22 00:07:31,172 | INFO     | nevents: 400
[2025-02-22 01:07:52] 2025-02-22 00:07:31,173 | INFO     | neventsw: 0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,173 | INFO     | pid: 2095146
[2025-02-22 01:07:52] 2025-02-22 00:07:31,173 | INFO     | pgrp: 2095146
[2025-02-22 01:07:52] 2025-02-22 00:07:31,173 | INFO     | corecount: 4
[2025-02-22 01:07:52] 2025-02-22 00:07:31,173 | INFO     | event service: False
[2025-02-22 01:07:52] 2025-02-22 00:07:31,173 | INFO     | sizes: {0: 2383208, 1: 2383407, 6: 2383613, 11: 2383641, 22858: 2418103, 22859: 2427066, 22860: 2427250, 22868: 2427420}
[2025-02-22 01:07:52] 2025-02-22 00:07:31,173 | INFO     | --------------------------------------------------
[2025-02-22 01:07:52] 2025-02-22 00:07:31,173 | INFO     | 
[2025-02-22 01:07:52] 2025-02-22 00:07:31,173 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-02-22 01:07:52] 2025-02-22 00:07:31,204 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,204 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,204 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,204 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,206 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 01:07:52] 2025-02-22 00:07:31,206 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,206 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 01:07:52] 2025-02-22 00:07:31,206 | INFO     | job 6519783507 has completed (purged errors)
[2025-02-22 01:07:52] 2025-02-22 00:07:31,206 | INFO     | overall cleanup function is called
[2025-02-22 01:07:52] 2025-02-22 00:07:32,072 | INFO     | 22887s have passed since pilot start
[2025-02-22 01:07:52] 2025-02-22 00:07:32,215 | INFO     | --- collectZombieJob: --- 10, [2095146]
[2025-02-22 01:07:52] 2025-02-22 00:07:32,216 | INFO     | zombie collector waiting for pid 2095146
[2025-02-22 01:07:52] 2025-02-22 00:07:32,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 01:07:52] 2025-02-22 00:07:32,216 | INFO     | collected zombie processes
[2025-02-22 01:07:52] 2025-02-22 00:07:32,216 | INFO     | will attempt to kill all subprocesses of pid=2095146
[2025-02-22 01:07:52] 2025-02-22 00:07:32,557 | INFO     | process IDs to be killed: [2095146] (in reverse order)
[2025-02-22 01:07:52] 2025-02-22 00:07:32,828 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 01:07:52] 2025-02-22 00:07:32,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 01:07:52] 2025-02-22 00:07:32,855 | INFO     | did not find any defunct processes belonging to 2095146
[2025-02-22 01:07:52] 2025-02-22 00:07:32,878 | INFO     | did not find any defunct processes belonging to 2095146
[2025-02-22 01:07:52] 2025-02-22 00:07:32,878 | INFO     | ready for new job
[2025-02-22 01:07:52] 2025-02-22 00:07:32,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 01:07:52] 2025-02-22 00:07:32,881 | INFO     | **************************************
[2025-02-22 01:07:52] 2025-02-22 00:07:32,881 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 01:07:52] 2025-02-22 00:07:32,881 | INFO     | **************************************
[2025-02-22 01:07:52] 2025-02-22 00:07:32,882 | INFO     | 
[2025-02-22 01:07:52] 2025-02-22 00:07:32,890 | INFO     | architecture information:
[2025-02-22 01:07:52] 2025-02-22 00:07:32,891 | INFO     | executing command: cat /etc/os-release
[2025-02-22 01:07:52] 2025-02-22 00:07:32,912 | INFO     | cat /etc/os-release:
[2025-02-22 01:07:52] NAME="CentOS Linux"
[2025-02-22 01:07:52] VERSION="7 (Core)"
[2025-02-22 01:07:52] ID="centos"
[2025-02-22 01:07:52] ID_LIKE="rhel fedora"
[2025-02-22 01:07:52] VERSION_ID="7"
[2025-02-22 01:07:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 01:07:52] ANSI_COLOR="0;31"
[2025-02-22 01:07:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 01:07:52] HOME_URL="https://www.centos.org/"
[2025-02-22 01:07:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 01:07:52] 
[2025-02-22 01:07:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 01:07:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 01:07:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 01:07:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 01:07:52] 
[2025-02-22 01:07:52] 2025-02-22 00:07:32,913 | INFO     | **************************************
[2025-02-22 01:07:52] 2025-02-22 00:07:33,416 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-02-22 01:07:52] 2025-02-22 00:07:33,440 | INFO     | sufficient remaining disk space (3245172850688 B)
[2025-02-22 01:07:52] 2025-02-22 00:07:33,441 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 01:07:52] 2025-02-22 00:07:33,441 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 01:07:52] 2025-02-22 00:07:33,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 01:07:52] 2025-02-22 00:07:33,442 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 01:07:52] 2025-02-22 00:07:33,443 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 01:07:52] 2025-02-22 00:07:33,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 01:07:52] 2025-02-22 00:07:33,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 01:07:52] 2025-02-22 00:07:33,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 01:07:52] 2025-02-22 00:07:33,677 | INFO     | all payload control threads have been joined
[2025-02-22 01:07:52] 2025-02-22 00:07:33,848 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-22 01:07:52] 2025-02-22 00:07:33,849 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-22 01:07:52] 2025-02-22 00:07:33,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 01:07:52] 2025-02-22 00:07:33,849 | INFO     | will abort loop
[2025-02-22 01:07:52] 2025-02-22 00:07:34,052 | INFO     | all data control threads have been joined
[2025-02-22 01:07:52] 2025-02-22 00:07:34,446 | INFO     | [job] retrieve thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:34,680 | INFO     | [payload] control thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:34,732 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:34,848 | INFO     | all job control threads have been joined
[2025-02-22 01:07:52] 2025-02-22 00:07:34,850 | INFO     | [payload] validate_post thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:34,855 | INFO     | [job] job monitor thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:35,058 | INFO     | [data] control thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:35,447 | INFO     | [data] copytool_out thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:35,474 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:35,679 | INFO     | [payload] failed_post thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:35,758 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:35,786 | INFO     | [data] copytool_in thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:35,835 | INFO     | [job] validate thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:35,855 | INFO     | [job] control thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:36,181 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 01:07:52] 2025-02-22 00:07:37,187 | INFO     | [job] queue monitor thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:37,505 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:43,869 | INFO     | job.realtimelogging is not enabled
[2025-02-22 01:07:52] 2025-02-22 00:07:44,875 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 01:07:52] 2025-02-22 00:07:46,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22886044415808)>', '<ExcThread(monitor, started 22885062145792)>']
[2025-02-22 01:07:52] 2025-02-22 00:07:47,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 01:07:52] 2025-02-22 00:07:47,514 | INFO     | [monitor] control thread has ended
[2025-02-22 01:07:52] 2025-02-22 00:07:51,971 | INFO     | all workflow threads have been joined
[2025-02-22 01:07:52] 2025-02-22 00:07:51,971 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 01:07:52] 2025-02-22 00:07:51,971 | INFO     | traces error code: 0
[2025-02-22 01:07:52] 2025-02-22 00:07:51,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 01:07:52] 2025-02-22 00:07:52,120 [wrapper] ==== pilot stdout END ====
[2025-02-22 01:07:52] 2025-02-22 00:07:52,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 01:07:52] 2025-02-22 00:07:52,128 [wrapper] pilotpid: 2076355
[2025-02-22 01:07:52] 2025-02-22 00:07:52,132 [wrapper] Pilot exit status: 0
[2025-02-22 01:07:52] 2025-02-22 00:07:52,146 [wrapper] pandaids: 6519783507
[2025-02-22 01:07:52] 2025-02-22 00:07:52,298 [wrapper] cleanup supervisor_pilot 3629869 2076356
[2025-02-22 01:07:52] 2025-02-22 00:07:52,303 [wrapper] Test setup, not cleaning
[2025-02-22 01:07:52] 2025-02-22 00:07:52,311 [wrapper] apfmon messages muted
[2025-02-22 01:07:52] 2025-02-22 00:07:52,318 [wrapper] ==== wrapper stdout END ====
[2025-02-22 01:07:52] 2025-02-22 00:07:52,322 [wrapper] ==== wrapper stderr END ====
[2025-02-22 01:07:52]  *** Error codes and diagnostics ***
[2025-02-22 01:07:52]     "exeErrorCode": 0,
[2025-02-22 01:07:52]     "exeErrorDiag": "",
[2025-02-22 01:07:52]     "pilotErrorCode": 0,
[2025-02-22 01:07:52]     "pilotErrorDiag": "",
[2025-02-22 01:07:52]  *** Listing of results directory ***
[2025-02-22 01:07:52] total 663412
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc    491065 Feb 20 00:35 pilot3.tar.gz
[2025-02-22 01:07:52] -rwx------ 1 boinc boinc     35865 Feb 20 00:46 runpilot2-wrapper.sh
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc      5118 Feb 20 00:46 queuedata.json
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc       100 Feb 21 18:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 01:07:52] -rwxr-xr-x 1 boinc boinc      7986 Feb 21 18:45 run_atlas
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc       105 Feb 21 18:45 job.xml
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc      6675 Feb 21 18:45 init_data.xml
[2025-02-22 01:07:52] -rw-r--r-- 2 boinc boinc 346200849 Feb 21 18:45 EVNT.43092757._000821.pool.root.1
[2025-02-22 01:07:52] drwxrwx--x 2 boinc boinc      4096 Feb 21 18:45 shared
[2025-02-22 01:07:52] -rw-r--r-- 2 boinc boinc    503554 Feb 21 18:45 input.tar.gz
[2025-02-22 01:07:52] -rw-r--r-- 2 boinc boinc     17569 Feb 21 18:45 start_atlas.sh
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc         0 Feb 21 18:45 boinc_lockfile
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc      2556 Feb 21 18:45 pandaJob.out
[2025-02-22 01:07:52] -rw------- 1 boinc boinc       424 Feb 21 18:45 setup.sh.local
[2025-02-22 01:07:52] -rw------- 1 boinc boinc    987293 Feb 21 18:46 agis_schedconf.cvmfs.json
[2025-02-22 01:07:52] drwx------ 4 boinc boinc      4096 Feb 21 18:46 pilot3
[2025-02-22 01:07:52] -rw------- 1 boinc boinc 323383251 Feb 22 01:06 HITS.43205075._052353.pool.root.1
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc       532 Feb 22 01:06 boinc_task_state.xml
[2025-02-22 01:07:52] -rw------- 1 boinc boinc      1030 Feb 22 01:07 memory_monitor_summary.json
[2025-02-22 01:07:52] -rw------- 1 boinc boinc   1582569 Feb 22 01:07 agis_ddmendpoints.agis.ALL.json
[2025-02-22 01:07:52] -rw------- 1 boinc boinc    464103 Feb 22 01:07 log.43205075._052353.job.log.tgz.1
[2025-02-22 01:07:52] -rw------- 1 boinc boinc      7700 Feb 22 01:07 heartbeat.json
[2025-02-22 01:07:52] -rw------- 1 boinc boinc        95 Feb 22 01:07 pilot_heartbeat.json
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc        28 Feb 22 01:07 wrapper_checkpoint.txt
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc      8192 Feb 22 01:07 boinc_mmap_file
[2025-02-22 01:07:52] -rw------- 1 boinc boinc      4607 Feb 22 01:07 pilotlog.txt
[2025-02-22 01:07:52] -rw------- 1 boinc boinc   2510709 Feb 22 01:07 log.43205075._052353.job.log.1
[2025-02-22 01:07:52] -rw------- 1 boinc boinc       357 Feb 22 01:07 output.list
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc       620 Feb 22 01:07 runtime_log
[2025-02-22 01:07:52] -rw------- 1 boinc boinc   2990080 Feb 22 01:07 result.tar.gz
[2025-02-22 01:07:52] -rw------- 1 boinc boinc       666 Feb 22 01:07 tLcMDm6w846n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQDbKDmXDpR6n.diag
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc     11424 Feb 22 01:07 runtime_log.err
[2025-02-22 01:07:52] -rw-r--r-- 1 boinc boinc     21243 Feb 22 01:07 stderr.txt
[2025-02-22 01:07:52] HITS file was successfully produced:
[2025-02-22 01:07:52] -rw------- 1 boinc boinc 323383251 Feb 22 01:06 shared/HITS.pool.root.1
[2025-02-22 01:07:52]  *** Contents of shared directory: ***
[2025-02-22 01:07:52] total 657332
[2025-02-22 01:07:52] -rw-r--r-- 2 boinc boinc 346200849 Feb 21 18:45 ATLAS.root_0
[2025-02-22 01:07:52] -rw-r--r-- 2 boinc boinc    503554 Feb 21 18:45 input.tar.gz
[2025-02-22 01:07:52] -rw-r--r-- 2 boinc boinc     17569 Feb 21 18:45 start_atlas.sh
[2025-02-22 01:07:52] -rw------- 1 boinc boinc 323383251 Feb 22 01:06 HITS.pool.root.1
[2025-02-22 01:07:52] -rw------- 1 boinc boinc   2990080 Feb 22 01:07 result.tar.gz
01:07:53 (2072179): run_atlas exited; CPU time 85519.297447
01:07:53 (2072179): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN