Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:44:36 (264347): wrapper (7.7.26015): starting
05:44:36 (264347): wrapper: running run_atlas (--nthreads 4)
[2025-02-21 05:44:36] Arguments: --nthreads 4
[2025-02-21 05:44:36] Threads: 4
[2025-02-21 05:44:36] Checking for CVMFS
[2025-02-21 05:44:36] No cvmfs_config command found, will try listing directly
[2025-02-21 05:44:36] CVMFS is ok
[2025-02-21 05:44:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 05:44:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 05:44:36] Further information can be found at the LHC@home message board.
[2025-02-21 05:44:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 05:44:36] Checking for apptainer binary...
[2025-02-21 05:44:36] which: no apptainer in ((null))
[2025-02-21 05:44:36] apptainer is not installed, using version from CVMFS
[2025-02-21 05:44:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 05:44:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-02-21 05:44:37] apptainer works
[2025-02-21 05:44:37] Set ATHENA_PROC_NUMBER=4
[2025-02-21 05:44:37] Set ATHENA_CORE_NUMBER=4
[2025-02-21 05:44:37] Starting ATLAS job with PandaID=6519743687
[2025-02-21 05:44:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 11:39:43]  *** The last 200 lines of the pilot log: ***
[2025-02-21 11:39:43] 2025-02-21 10:39:23,610 | INFO     | sum of square deviations: 9508390372.0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,613 | INFO     | sum of deviations: 11527205989.999998
[2025-02-21 11:39:43] 2025-02-21 10:39:23,613 | INFO     | mean x: 1740124775.0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,613 | INFO     | mean y: 2376547.8178913738
[2025-02-21 11:39:43] 2025-02-21 10:39:23,613 | INFO     | -- intersect: -2107210453.2370756
[2025-02-21 11:39:43] 2025-02-21 10:39:23,613 | INFO     | intersect: -2107210453.2370756
[2025-02-21 11:39:43] 2025-02-21 10:39:23,614 | INFO     | chi2: 0.002739336818287553
[2025-02-21 11:39:43] 2025-02-21 10:39:23,614 | INFO     | current chi2=0.002739336818287553 (change=53.650141956316034 %)
[2025-02-21 11:39:43] 2025-02-21 10:39:23,614 | INFO     | model: linear, x: [1740115564.0, 1740115625.0, 1740115686.0, 1740115747.0, 1740115808.0, 1740115869.0, 1740115930.0, 1740115991.0, 1740116052.0, 1740116113.0, 1740
[2025-02-21 11:39:43] 2025-02-21 10:39:23,615 | INFO     | sum of square deviations: 9059954057.0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,617 | INFO     | sum of deviations: 9376802117.499998
[2025-02-21 11:39:43] 2025-02-21 10:39:23,617 | INFO     | mean x: 1740124927.5
[2025-02-21 11:39:43] 2025-02-21 10:39:23,618 | INFO     | mean y: 2377278.899350649
[2025-02-21 11:39:43] 2025-02-21 10:39:23,618 | INFO     | -- intersect: -1798603940.4579
[2025-02-21 11:39:43] 2025-02-21 10:39:23,618 | INFO     | intersect: -1798603940.4579
[2025-02-21 11:39:43] 2025-02-21 10:39:23,618 | INFO     | chi2: 0.0016555335872274093
[2025-02-21 11:39:43] 2025-02-21 10:39:23,618 | INFO     | current chi2=0.0016555335872274093 (change=39.5644385102546 %)
[2025-02-21 11:39:43] 2025-02-21 10:39:23,619 | INFO     | model: linear, x: [1740115869.0, 1740115930.0, 1740115991.0, 1740116052.0, 1740116113.0, 1740116174.0, 1740116235.0, 1740116296.0, 1740116357.0, 1740116418.0, 1740
[2025-02-21 11:39:43] 2025-02-21 10:39:23,620 | INFO     | sum of square deviations: 8625843592.0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,623 | INFO     | sum of deviations: 7376528517.000001
[2025-02-21 11:39:43] 2025-02-21 10:39:23,623 | INFO     | mean x: 1740125080.0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,623 | INFO     | mean y: 2377981.3432343234
[2025-02-21 11:39:43] 2025-02-21 10:39:23,623 | INFO     | -- intersect: -1485717894.5977201
[2025-02-21 11:39:43] 2025-02-21 10:39:23,623 | INFO     | intersect: -1485717894.5977201
[2025-02-21 11:39:43] 2025-02-21 10:39:23,624 | INFO     | chi2: 0.0006116181569621813
[2025-02-21 11:39:43] 2025-02-21 10:39:23,624 | INFO     | current chi2=0.0006116181569621813 (change=63.05613116635806 %)
[2025-02-21 11:39:43] 2025-02-21 10:39:23,624 | INFO     | model: linear, x: [1740116174.0, 1740116235.0, 1740116296.0, 1740116357.0, 1740116418.0, 1740116479.0, 1740116540.0, 1740116601.0, 1740116662.0, 1740116723.0, 1740
[2025-02-21 11:39:43] 2025-02-21 10:39:23,624 | INFO     | sum of square deviations: 8205826414.5
[2025-02-21 11:39:43] 2025-02-21 10:39:23,627 | INFO     | sum of deviations: 6155104106.0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,627 | INFO     | mean x: 1740125232.5
[2025-02-21 11:39:43] 2025-02-21 10:39:23,627 | INFO     | mean y: 2378423.255033557
[2025-02-21 11:39:43] 2025-02-21 10:39:23,627 | INFO     | -- intersect: -1302871215.5368419
[2025-02-21 11:39:43] 2025-02-21 10:39:23,627 | INFO     | intersect: -1302871215.5368419
[2025-02-21 11:39:43] 2025-02-21 10:39:23,628 | INFO     | chi2: 0.0001773906475102976
[2025-02-21 11:39:43] 2025-02-21 10:39:23,628 | INFO     | current chi2=0.0001773906475102976 (change=70.99650402934876 %)
[2025-02-21 11:39:43] 2025-02-21 10:39:23,628 | INFO     | model: linear, x: [1740116479.0, 1740116540.0, 1740116601.0, 1740116662.0, 1740116723.0, 1740116784.0, 1740116845.0, 1740116906.0, 1740116967.0, 1740117028.0, 1740
[2025-02-21 11:39:43] 2025-02-21 10:39:23,628 | INFO     | sum of square deviations: 7799669962.0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,631 | INFO     | sum of deviations: 5564683642.000001
[2025-02-21 11:39:43] 2025-02-21 10:39:23,631 | INFO     | mean x: 1740125385.0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,631 | INFO     | mean y: 2378644.938566553
[2025-02-21 11:39:43] 2025-02-21 10:39:23,631 | INFO     | -- intersect: -1239115842.9199257
[2025-02-21 11:39:43] 2025-02-21 10:39:23,631 | INFO     | intersect: -1239115842.9199257
[2025-02-21 11:39:43] 2025-02-21 10:39:23,632 | INFO     | chi2: 0.000139783400022382
[2025-02-21 11:39:43] 2025-02-21 10:39:23,632 | INFO     | current chi2=0.000139783400022382 (change=21.200242524472706 %)
[2025-02-21 11:39:43] 2025-02-21 10:39:23,632 | INFO     | left removable region: 110
[2025-02-21 11:39:43] 2025-02-21 10:39:23,632 | INFO     | model: linear, x: [1740119834.0, 1740119895.0, 1740119956.0, 1740120017.0, 1740120078.0, 1740120139.0, 1740120200.0, 1740120261.0, 1740120322.0, 1740120383.0, 1740
[2025-02-21 11:39:43] 2025-02-21 10:39:23,633 | INFO     | sum of square deviations: 3871990738.0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,634 | INFO     | sum of deviations: 2288062816.5
[2025-02-21 11:39:43] 2025-02-21 10:39:23,634 | INFO     | mean x: 1740126879.5
[2025-02-21 11:39:43] 2025-02-21 10:39:23,635 | INFO     | mean y: 2379775.7370689656
[2025-02-21 11:39:43] 2025-02-21 10:39:23,635 | INFO     | -- intersect: -1025907706.9527014
[2025-02-21 11:39:43] 2025-02-21 10:39:23,635 | INFO     | intersect: -1025907706.9527014
[2025-02-21 11:39:43] 2025-02-21 10:39:23,635 | INFO     | chi2: 7.120472455045497e-05
[2025-02-21 11:39:43] 2025-02-21 10:39:23,635 | INFO     | -- intersect: -1025907706.9527014
[2025-02-21 11:39:43] 2025-02-21 10:39:23,635 | INFO     | current memory leak: 0.59 B/s (using 232 data points, chi2=0.00)
[2025-02-21 11:39:43] 2025-02-21 10:39:23,636 | INFO     | ..............................
[2025-02-21 11:39:43] 2025-02-21 10:39:23,636 | INFO     | . Timing measurements:
[2025-02-21 11:39:43] 2025-02-21 10:39:23,636 | INFO     | . get job = 0 s
[2025-02-21 11:39:43] 2025-02-21 10:39:23,636 | INFO     | . initial setup = 1 s
[2025-02-21 11:39:43] 2025-02-21 10:39:23,637 | INFO     | . payload setup = 8 s
[2025-02-21 11:39:43] 2025-02-21 10:39:23,637 | INFO     | . stage-in = 0 s
[2025-02-21 11:39:43] 2025-02-21 10:39:23,637 | INFO     | . payload execution = 21231 s
[2025-02-21 11:39:43] 2025-02-21 10:39:23,637 | INFO     | . stage-out = 1 s
[2025-02-21 11:39:43] 2025-02-21 10:39:23,637 | INFO     | . log creation = 0 s
[2025-02-21 11:39:43] 2025-02-21 10:39:23,637 | INFO     | ..............................
[2025-02-21 11:39:43] 2025-02-21 10:39:23,814 | INFO     | 
[2025-02-21 11:39:43] 2025-02-21 10:39:23,815 | INFO     | job summary report
[2025-02-21 11:39:43] 2025-02-21 10:39:23,815 | INFO     | --------------------------------------------------
[2025-02-21 11:39:43] 2025-02-21 10:39:23,815 | INFO     | PanDA job id: 6519743687
[2025-02-21 11:39:43] 2025-02-21 10:39:23,815 | INFO     | task id: 43205075
[2025-02-21 11:39:43] 2025-02-21 10:39:23,815 | INFO     | errors: (none)
[2025-02-21 11:39:43] 2025-02-21 10:39:23,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 11:39:43] 2025-02-21 10:39:23,815 | INFO     | pilot state: finished 
[2025-02-21 11:39:43] 2025-02-21 10:39:23,815 | INFO     | transexitcode: 0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,815 | INFO     | exeerrorcode: 0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,815 | INFO     | exeerrordiag: 
[2025-02-21 11:39:43] 2025-02-21 10:39:23,816 | INFO     | exitcode: 0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,816 | INFO     | exitmsg: OK
[2025-02-21 11:39:43] 2025-02-21 10:39:23,816 | INFO     | cpuconsumptiontime: 81769 s
[2025-02-21 11:39:43] 2025-02-21 10:39:23,816 | INFO     | nevents: 400
[2025-02-21 11:39:43] 2025-02-21 10:39:23,816 | INFO     | neventsw: 0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,816 | INFO     | pid: 281010
[2025-02-21 11:39:43] 2025-02-21 10:39:23,816 | INFO     | pgrp: 281010
[2025-02-21 11:39:43] 2025-02-21 10:39:23,816 | INFO     | corecount: 4
[2025-02-21 11:39:43] 2025-02-21 10:39:23,816 | INFO     | event service: False
[2025-02-21 11:39:43] 2025-02-21 10:39:23,816 | INFO     | sizes: {0: 2389112, 1: 2389311, 7: 2389517, 11: 2389545, 21243: 2422751, 21244: 2422750, 21245: 2432739, 21246: 2432795, 21255: 2432965}
[2025-02-21 11:39:43] 2025-02-21 10:39:23,817 | INFO     | --------------------------------------------------
[2025-02-21 11:39:43] 2025-02-21 10:39:23,817 | INFO     | 
[2025-02-21 11:39:43] 2025-02-21 10:39:23,817 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-02-21 11:39:43] 2025-02-21 10:39:23,859 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,859 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,859 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,859 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,859 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,859 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,863 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 11:39:43] 2025-02-21 10:39:23,864 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,864 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 11:39:43] 2025-02-21 10:39:23,864 | INFO     | job 6519743687 has completed (purged errors)
[2025-02-21 11:39:43] 2025-02-21 10:39:23,864 | INFO     | overall cleanup function is called
[2025-02-21 11:39:43] 2025-02-21 10:39:24,751 | INFO     | PID=269318 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-21 11:39:43] 2025-02-21 10:39:24,751 | INFO     | .. there are 27 such processes running
[2025-02-21 11:39:43] 2025-02-21 10:39:24,876 | INFO     | --- collectZombieJob: --- 10, [281010]
[2025-02-21 11:39:43] 2025-02-21 10:39:24,877 | INFO     | zombie collector waiting for pid 281010
[2025-02-21 11:39:43] 2025-02-21 10:39:24,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 11:39:43] 2025-02-21 10:39:24,877 | INFO     | collected zombie processes
[2025-02-21 11:39:43] 2025-02-21 10:39:24,877 | INFO     | will attempt to kill all subprocesses of pid=281010
[2025-02-21 11:39:43] 2025-02-21 10:39:25,212 | INFO     | process IDs to be killed: [281010] (in reverse order)
[2025-02-21 11:39:43] 2025-02-21 10:39:25,479 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 11:39:43] 2025-02-21 10:39:25,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 11:39:43] 2025-02-21 10:39:25,508 | INFO     | did not find any defunct processes belonging to 281010
[2025-02-21 11:39:43] 2025-02-21 10:39:25,529 | INFO     | did not find any defunct processes belonging to 281010
[2025-02-21 11:39:43] 2025-02-21 10:39:25,529 | INFO     | ready for new job
[2025-02-21 11:39:43] 2025-02-21 10:39:25,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 11:39:43] 2025-02-21 10:39:25,533 | INFO     | **************************************
[2025-02-21 11:39:43] 2025-02-21 10:39:25,533 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 11:39:43] 2025-02-21 10:39:25,533 | INFO     | **************************************
[2025-02-21 11:39:43] 2025-02-21 10:39:25,534 | INFO     | 
[2025-02-21 11:39:43] 2025-02-21 10:39:25,542 | INFO     | architecture information:
[2025-02-21 11:39:43] 2025-02-21 10:39:25,543 | INFO     | executing command: cat /etc/os-release
[2025-02-21 11:39:43] 2025-02-21 10:39:25,564 | INFO     | cat /etc/os-release:
[2025-02-21 11:39:43] NAME="CentOS Linux"
[2025-02-21 11:39:43] VERSION="7 (Core)"
[2025-02-21 11:39:43] ID="centos"
[2025-02-21 11:39:43] ID_LIKE="rhel fedora"
[2025-02-21 11:39:43] VERSION_ID="7"
[2025-02-21 11:39:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 11:39:43] ANSI_COLOR="0;31"
[2025-02-21 11:39:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 11:39:43] HOME_URL="https://www.centos.org/"
[2025-02-21 11:39:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 11:39:43] 
[2025-02-21 11:39:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 11:39:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 11:39:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 11:39:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 11:39:43] 
[2025-02-21 11:39:43] 2025-02-21 10:39:25,564 | INFO     | **************************************
[2025-02-21 11:39:43] 2025-02-21 10:39:26,066 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-02-21 11:39:43] 2025-02-21 10:39:26,088 | INFO     | sufficient remaining disk space (3265932558336 B)
[2025-02-21 11:39:43] 2025-02-21 10:39:26,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 11:39:43] 2025-02-21 10:39:26,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 11:39:43] 2025-02-21 10:39:26,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 11:39:43] 2025-02-21 10:39:26,272 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-21 11:39:43] 2025-02-21 10:39:26,273 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-21 11:39:43] 2025-02-21 10:39:26,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 11:39:43] 2025-02-21 10:39:26,273 | INFO     | will abort loop
[2025-02-21 11:39:43] 2025-02-21 10:39:26,625 | INFO     | all job control threads have been joined
[2025-02-21 11:39:43] 2025-02-21 10:39:26,756 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 11:39:43] 2025-02-21 10:39:26,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 11:39:43] 2025-02-21 10:39:26,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 11:39:43] 2025-02-21 10:39:26,909 | INFO     | all payload control threads have been joined
[2025-02-21 11:39:43] 2025-02-21 10:39:27,094 | INFO     | [job] retrieve thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:27,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 11:39:43] 2025-02-21 10:39:27,180 | INFO     | all data control threads have been joined
[2025-02-21 11:39:43] 2025-02-21 10:39:27,278 | INFO     | [job] job monitor thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:27,559 | INFO     | [data] copytool_in thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:27,630 | INFO     | [job] control thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:27,848 | INFO     | [payload] failed_post thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:27,914 | INFO     | [payload] control thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:27,987 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:27,988 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:28,052 | INFO     | [payload] validate_post thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:28,185 | INFO     | [data] control thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:28,377 | INFO     | [job] validate thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:28,514 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:28,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 11:39:43] 2025-02-21 10:39:29,116 | INFO     | [data] copytool_out thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:29,756 | INFO     | [job] queue monitor thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:30,095 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:36,286 | INFO     | job.realtimelogging is not enabled
[2025-02-21 11:39:43] 2025-02-21 10:39:37,291 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 11:39:43] 2025-02-21 10:39:38,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22606595491648)>', '<ExcThread(monitor, started 22606363199232)>']
[2025-02-21 11:39:43] 2025-02-21 10:39:38,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 11:39:43] 2025-02-21 10:39:38,817 | INFO     | [monitor] control thread has ended
[2025-02-21 11:39:43] 2025-02-21 10:39:43,169 | INFO     | all workflow threads have been joined
[2025-02-21 11:39:43] 2025-02-21 10:39:43,169 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 11:39:43] 2025-02-21 10:39:43,169 | INFO     | traces error code: 0
[2025-02-21 11:39:43] 2025-02-21 10:39:43,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 11:39:43] 2025-02-21 10:39:43,351 [wrapper] ==== pilot stdout END ====
[2025-02-21 11:39:43] 2025-02-21 10:39:43,357 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 11:39:43] 2025-02-21 10:39:43,361 [wrapper] pilotpid: 269318
[2025-02-21 11:39:43] 2025-02-21 10:39:43,365 [wrapper] Pilot exit status: 0
[2025-02-21 11:39:43] 2025-02-21 10:39:43,381 [wrapper] pandaids: 6519743687
[2025-02-21 11:39:43] 2025-02-21 10:39:43,537 [wrapper] cleanup supervisor_pilot 1916593 269321
[2025-02-21 11:39:43] 2025-02-21 10:39:43,542 [wrapper] Test setup, not cleaning
[2025-02-21 11:39:43] 2025-02-21 10:39:43,550 [wrapper] apfmon messages muted
[2025-02-21 11:39:43] 2025-02-21 10:39:43,554 [wrapper] ==== wrapper stdout END ====
[2025-02-21 11:39:43] 2025-02-21 10:39:43,558 [wrapper] ==== wrapper stderr END ====
[2025-02-21 11:39:43]  *** Error codes and diagnostics ***
[2025-02-21 11:39:43]     "exeErrorCode": 0,
[2025-02-21 11:39:43]     "exeErrorDiag": "",
[2025-02-21 11:39:43]     "pilotErrorCode": 0,
[2025-02-21 11:39:43]     "pilotErrorDiag": "",
[2025-02-21 11:39:43]  *** Listing of results directory ***
[2025-02-21 11:39:43] total 663260
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc    491065 Feb 20 00:00 pilot3.tar.gz
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc      5118 Feb 20 00:23 queuedata.json
[2025-02-21 11:39:43] -rwx------ 1 boinc boinc     35865 Feb 20 00:24 runpilot2-wrapper.sh
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc       100 Feb 21 05:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 11:39:43] -rwxr-xr-x 1 boinc boinc      7986 Feb 21 05:44 run_atlas
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc       105 Feb 21 05:44 job.xml
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc      6677 Feb 21 05:44 init_data.xml
[2025-02-21 11:39:43] -rw-r--r-- 2 boinc boinc 344542531 Feb 21 05:44 EVNT.43092757._000379.pool.root.1
[2025-02-21 11:39:43] -rw-r--r-- 2 boinc boinc     17569 Feb 21 05:44 start_atlas.sh
[2025-02-21 11:39:43] drwxrwx--x 2 boinc boinc      4096 Feb 21 05:44 shared
[2025-02-21 11:39:43] -rw-r--r-- 2 boinc boinc    503562 Feb 21 05:44 input.tar.gz
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc         0 Feb 21 05:44 boinc_lockfile
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc      2554 Feb 21 05:44 pandaJob.out
[2025-02-21 11:39:43] -rw------- 1 boinc boinc       424 Feb 21 05:44 setup.sh.local
[2025-02-21 11:39:43] -rw------- 1 boinc boinc    994760 Feb 21 05:44 agis_schedconf.cvmfs.json
[2025-02-21 11:39:43] drwx------ 4 boinc boinc      4096 Feb 21 05:44 pilot3
[2025-02-21 11:39:43] -rw------- 1 boinc boinc 324639162 Feb 21 11:38 HITS.43205075._052203.pool.root.1
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc       531 Feb 21 11:38 boinc_task_state.xml
[2025-02-21 11:39:43] -rw------- 1 boinc boinc        95 Feb 21 11:38 pilot_heartbeat.json
[2025-02-21 11:39:43] -rw------- 1 boinc boinc      1043 Feb 21 11:39 memory_monitor_summary.json
[2025-02-21 11:39:43] -rw------- 1 boinc boinc   1582569 Feb 21 11:39 agis_ddmendpoints.agis.ALL.json
[2025-02-21 11:39:43] -rw------- 1 boinc boinc    452627 Feb 21 11:39 log.43205075._052203.job.log.tgz.1
[2025-02-21 11:39:43] -rw------- 1 boinc boinc      7711 Feb 21 11:39 heartbeat.json
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc      8192 Feb 21 11:39 boinc_mmap_file
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc        28 Feb 21 11:39 wrapper_checkpoint.txt
[2025-02-21 11:39:43] -rw------- 1 boinc boinc      4484 Feb 21 11:39 pilotlog.txt
[2025-02-21 11:39:43] -rw------- 1 boinc boinc   2642786 Feb 21 11:39 log.43205075._052203.job.log.1
[2025-02-21 11:39:43] -rw------- 1 boinc boinc       357 Feb 21 11:39 output.list
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc       620 Feb 21 11:39 runtime_log
[2025-02-21 11:39:43] -rw------- 1 boinc boinc   3112960 Feb 21 11:39 result.tar.gz
[2025-02-21 11:39:43] -rw------- 1 boinc boinc       667 Feb 21 11:39 tmQKDmyb846nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmQ0oKDm07DF2m.diag
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc     11424 Feb 21 11:39 runtime_log.err
[2025-02-21 11:39:43] -rw-r--r-- 1 boinc boinc     21395 Feb 21 11:39 stderr.txt
[2025-02-21 11:39:43] HITS file was successfully produced:
[2025-02-21 11:39:43] -rw------- 1 boinc boinc 324639162 Feb 21 11:38 shared/HITS.pool.root.1
[2025-02-21 11:39:43]  *** Contents of shared directory: ***
[2025-02-21 11:39:43] total 657056
[2025-02-21 11:39:43] -rw-r--r-- 2 boinc boinc 344542531 Feb 21 05:44 ATLAS.root_0
[2025-02-21 11:39:43] -rw-r--r-- 2 boinc boinc     17569 Feb 21 05:44 start_atlas.sh
[2025-02-21 11:39:43] -rw-r--r-- 2 boinc boinc    503562 Feb 21 05:44 input.tar.gz
[2025-02-21 11:39:43] -rw------- 1 boinc boinc 324639162 Feb 21 11:38 HITS.pool.root.1
[2025-02-21 11:39:43] -rw------- 1 boinc boinc   3112960 Feb 21 11:39 result.tar.gz
11:39:45 (264347): run_atlas exited; CPU time 81511.794266
11:39:45 (264347): called boinc_finish(0)

</stderr_txt>
]]>

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