Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:42:47 (1947521): wrapper (7.7.26015): starting
18:42:47 (1947521): wrapper: running run_atlas (--nthreads 4)
[2025-02-21 18:42:47] Arguments: --nthreads 4
[2025-02-21 18:42:47] Threads: 4
[2025-02-21 18:42:47] Checking for CVMFS
[2025-02-21 18:42:47] No cvmfs_config command found, will try listing directly
[2025-02-21 18:42:47] CVMFS is ok
[2025-02-21 18:42:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 18:42:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 18:42:47] Further information can be found at the LHC@home message board.
[2025-02-21 18:42:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 18:42:47] Checking for apptainer binary...
[2025-02-21 18:42:47] which: no apptainer in ((null))
[2025-02-21 18:42:47] apptainer is not installed, using version from CVMFS
[2025-02-21 18:42:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 18:42:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-02-21 18:42:47] apptainer works
[2025-02-21 18:42:47] Set ATHENA_PROC_NUMBER=4
[2025-02-21 18:42:47] Set ATHENA_CORE_NUMBER=4
[2025-02-21 18:42:47] Starting ATLAS job with PandaID=6519371898
[2025-02-21 18:42:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 01:03:30]  *** The last 200 lines of the pilot log: ***
[2025-02-22 01:03:30] 2025-02-22 00:03:09,348 | INFO     | model: linear, x: [1740159814.0, 1740159875.0, 1740159936.0, 1740159997.0, 1740160058.0, 1740160119.0, 1740160180.0, 1740160241.0, 1740160302.0, 1740160363.0, 1740
[2025-02-22 01:03:30] 2025-02-22 00:03:09,349 | INFO     | sum of square deviations: 16221466937.5
[2025-02-22 01:03:30] 2025-02-22 00:03:09,353 | INFO     | sum of deviations: 174743631517.0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,353 | INFO     | mean x: 1740171190.5
[2025-02-22 01:03:30] 2025-02-22 00:03:09,353 | INFO     | mean y: 2336718.5347593585
[2025-02-22 01:03:30] 2025-02-22 00:03:09,353 | INFO     | -- intersect: -18743429891.898293
[2025-02-22 01:03:30] 2025-02-22 00:03:09,353 | INFO     | intersect: -18743429891.898293
[2025-02-22 01:03:30] 2025-02-22 00:03:09,353 | INFO     | chi2: 4.919672693327368
[2025-02-22 01:03:30] 2025-02-22 00:03:09,354 | INFO     | model: linear, x: [1740159814.0, 1740159875.0, 1740159936.0, 1740159997.0, 1740160058.0, 1740160119.0, 1740160180.0, 1740160241.0, 1740160302.0, 1740160363.0, 1740
[2025-02-22 01:03:30] 2025-02-22 00:03:09,354 | INFO     | sum of square deviations: 15579529320.0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,357 | INFO     | sum of deviations: 196220814015.99997
[2025-02-22 01:03:30] 2025-02-22 00:03:09,357 | INFO     | mean x: 1740171038.0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,358 | INFO     | mean y: 2341758.539295393
[2025-02-22 01:03:30] 2025-02-22 00:03:09,358 | INFO     | -- intersect: -21914737415.674656
[2025-02-22 01:03:30] 2025-02-22 00:03:09,358 | INFO     | intersect: -21914737415.674656
[2025-02-22 01:03:30] 2025-02-22 00:03:09,358 | INFO     | chi2: 4.128812368893209
[2025-02-22 01:03:30] 2025-02-22 00:03:09,358 | INFO     | current chi2=4.128812368893209 (change=16.075466270486157 %)
[2025-02-22 01:03:30] 2025-02-22 00:03:09,358 | INFO     | right removable region: 368
[2025-02-22 01:03:30] 2025-02-22 00:03:09,359 | INFO     | model: linear, x: [1740160119.0, 1740160180.0, 1740160241.0, 1740160302.0, 1740160363.0, 1740160424.0, 1740160485.0, 1740160546.0, 1740160607.0, 1740160668.0, 1740
[2025-02-22 01:03:30] 2025-02-22 00:03:09,359 | INFO     | sum of square deviations: 15579529320.0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,362 | INFO     | sum of deviations: 85289119751.00002
[2025-02-22 01:03:30] 2025-02-22 00:03:09,362 | INFO     | mean x: 1740171343.0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,362 | INFO     | mean y: 2357936.6802168023
[2025-02-22 01:03:30] 2025-02-22 00:03:09,362 | INFO     | -- intersect: -9524096875.395294
[2025-02-22 01:03:30] 2025-02-22 00:03:09,362 | INFO     | intersect: -9524096875.395294
[2025-02-22 01:03:30] 2025-02-22 00:03:09,363 | INFO     | chi2: 2.456365408881702
[2025-02-22 01:03:30] 2025-02-22 00:03:09,363 | INFO     | current chi2=2.456365408881702 (change=50.07055220943234 %)
[2025-02-22 01:03:30] 2025-02-22 00:03:09,363 | INFO     | model: linear, x: [1740160424.0, 1740160485.0, 1740160546.0, 1740160607.0, 1740160668.0, 1740160729.0, 1740160790.0, 1740160851.0, 1740160912.0, 1740160973.0, 1740
[2025-02-22 01:03:30] 2025-02-22 00:03:09,364 | INFO     | sum of square deviations: 14954754815.0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,368 | INFO     | sum of deviations: 11217735483.0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,368 | INFO     | mean x: 1740171495.5
[2025-02-22 01:03:30] 2025-02-22 00:03:09,368 | INFO     | mean y: 2376017.9945054944
[2025-02-22 01:03:30] 2025-02-22 00:03:09,368 | INFO     | -- intersect: -1302946855.77108
[2025-02-22 01:03:30] 2025-02-22 00:03:09,368 | INFO     | intersect: -1302946855.77108
[2025-02-22 01:03:30] 2025-02-22 00:03:09,368 | INFO     | chi2: 0.9017024060057967
[2025-02-22 01:03:30] 2025-02-22 00:03:09,368 | INFO     | current chi2=0.9017024060057967 (change=63.291194268351525 %)
[2025-02-22 01:03:30] 2025-02-22 00:03:09,369 | INFO     | model: linear, x: [1740160729.0, 1740160790.0, 1740160851.0, 1740160912.0, 1740160973.0, 1740161034.0, 1740161095.0, 1740161156.0, 1740161217.0, 1740161278.0, 1740
[2025-02-22 01:03:30] 2025-02-22 00:03:09,369 | INFO     | sum of square deviations: 14346910860.0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,372 | INFO     | sum of deviations: -1911850104.9999962
[2025-02-22 01:03:30] 2025-02-22 00:03:09,372 | INFO     | mean x: 1740171648.0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,372 | INFO     | mean y: 2379292.1838440113
[2025-02-22 01:03:30] 2025-02-22 00:03:09,372 | INFO     | -- intersect: 234272232.7904894
[2025-02-22 01:03:30] 2025-02-22 00:03:09,372 | INFO     | intersect: 234272232.7904894
[2025-02-22 01:03:30] 2025-02-22 00:03:09,373 | INFO     | chi2: 0.8190824762288629
[2025-02-22 01:03:30] 2025-02-22 00:03:09,373 | INFO     | current chi2=0.8190824762288629 (change=9.162660455006332 %)
[2025-02-22 01:03:30] 2025-02-22 00:03:09,373 | INFO     | left removable region: 30
[2025-02-22 01:03:30] 2025-02-22 00:03:09,373 | INFO     | model: linear, x: [1740161644.0, 1740161705.0, 1740161766.0, 1740161827.0, 1740161888.0, 1740161949.0, 1740162010.0, 1740162071.0, 1740162132.0, 1740162193.0, 1740
[2025-02-22 01:03:30] 2025-02-22 00:03:09,373 | INFO     | sum of square deviations: 11973599384.5
[2025-02-22 01:03:30] 2025-02-22 00:03:09,376 | INFO     | sum of deviations: 17028276148.000002
[2025-02-22 01:03:30] 2025-02-22 00:03:09,376 | INFO     | mean x: 1740171922.5
[2025-02-22 01:03:30] 2025-02-22 00:03:09,377 | INFO     | mean y: 2386176.1952662724
[2025-02-22 01:03:30] 2025-02-22 00:03:09,377 | INFO     | -- intersect: -2472402489.2485833
[2025-02-22 01:03:30] 2025-02-22 00:03:09,377 | INFO     | intersect: -2472402489.2485833
[2025-02-22 01:03:30] 2025-02-22 00:03:09,377 | INFO     | chi2: 0.0017165979096357836
[2025-02-22 01:03:30] 2025-02-22 00:03:09,377 | INFO     | -- intersect: -2472402489.2485833
[2025-02-22 01:03:30] 2025-02-22 00:03:09,377 | INFO     | current memory leak: 1.42 B/s (using 338 data points, chi2=0.00)
[2025-02-22 01:03:30] 2025-02-22 00:03:09,378 | INFO     | ..............................
[2025-02-22 01:03:30] 2025-02-22 00:03:09,378 | INFO     | . Timing measurements:
[2025-02-22 01:03:30] 2025-02-22 00:03:09,378 | INFO     | . get job = 0 s
[2025-02-22 01:03:30] 2025-02-22 00:03:09,378 | INFO     | . initial setup = 1 s
[2025-02-22 01:03:30] 2025-02-22 00:03:09,378 | INFO     | . payload setup = 8 s
[2025-02-22 01:03:30] 2025-02-22 00:03:09,378 | INFO     | . stage-in = 0 s
[2025-02-22 01:03:30] 2025-02-22 00:03:09,378 | INFO     | . payload execution = 22766 s
[2025-02-22 01:03:30] 2025-02-22 00:03:09,378 | INFO     | . stage-out = 1 s
[2025-02-22 01:03:30] 2025-02-22 00:03:09,378 | INFO     | . log creation = 0 s
[2025-02-22 01:03:30] 2025-02-22 00:03:09,378 | INFO     | ..............................
[2025-02-22 01:03:30] 2025-02-22 00:03:09,467 | INFO     | 
[2025-02-22 01:03:30] 2025-02-22 00:03:09,467 | INFO     | job summary report
[2025-02-22 01:03:30] 2025-02-22 00:03:09,467 | INFO     | --------------------------------------------------
[2025-02-22 01:03:30] 2025-02-22 00:03:09,467 | INFO     | PanDA job id: 6519371898
[2025-02-22 01:03:30] 2025-02-22 00:03:09,468 | INFO     | task id: 43078919
[2025-02-22 01:03:30] 2025-02-22 00:03:09,468 | INFO     | errors: (none)
[2025-02-22 01:03:30] 2025-02-22 00:03:09,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 01:03:30] 2025-02-22 00:03:09,468 | INFO     | pilot state: finished 
[2025-02-22 01:03:30] 2025-02-22 00:03:09,468 | INFO     | transexitcode: 0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,468 | INFO     | exeerrorcode: 0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,468 | INFO     | exeerrordiag: 
[2025-02-22 01:03:30] 2025-02-22 00:03:09,468 | INFO     | exitcode: 0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,468 | INFO     | exitmsg: OK
[2025-02-22 01:03:30] 2025-02-22 00:03:09,468 | INFO     | cpuconsumptiontime: 85903 s
[2025-02-22 01:03:30] 2025-02-22 00:03:09,469 | INFO     | nevents: 400
[2025-02-22 01:03:30] 2025-02-22 00:03:09,469 | INFO     | neventsw: 0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,469 | INFO     | pid: 1961686
[2025-02-22 01:03:30] 2025-02-22 00:03:09,469 | INFO     | pgrp: 1961686
[2025-02-22 01:03:30] 2025-02-22 00:03:09,469 | INFO     | corecount: 4
[2025-02-22 01:03:30] 2025-02-22 00:03:09,469 | INFO     | event service: False
[2025-02-22 01:03:30] 2025-02-22 00:03:09,469 | INFO     | sizes: {0: 2383325, 7: 2383531, 11: 2383559, 22779: 2417747, 22780: 2426710, 22783: 2426766, 22791: 2427064}
[2025-02-22 01:03:30] 2025-02-22 00:03:09,469 | INFO     | --------------------------------------------------
[2025-02-22 01:03:30] 2025-02-22 00:03:09,469 | INFO     | 
[2025-02-22 01:03:30] 2025-02-22 00:03:09,469 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-02-22 01:03:30] 2025-02-22 00:03:09,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,499 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 01:03:30] 2025-02-22 00:03:09,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 01:03:30] 2025-02-22 00:03:09,500 | INFO     | job 6519371898 has completed (purged errors)
[2025-02-22 01:03:30] 2025-02-22 00:03:09,500 | INFO     | overall cleanup function is called
[2025-02-22 01:03:30] 2025-02-22 00:03:10,508 | INFO     | --- collectZombieJob: --- 10, [1961686]
[2025-02-22 01:03:30] 2025-02-22 00:03:10,508 | INFO     | zombie collector waiting for pid 1961686
[2025-02-22 01:03:30] 2025-02-22 00:03:10,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 01:03:30] 2025-02-22 00:03:10,509 | INFO     | collected zombie processes
[2025-02-22 01:03:30] 2025-02-22 00:03:10,509 | INFO     | will attempt to kill all subprocesses of pid=1961686
[2025-02-22 01:03:30] 2025-02-22 00:03:10,826 | INFO     | process IDs to be killed: [1961686] (in reverse order)
[2025-02-22 01:03:30] 2025-02-22 00:03:11,087 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 01:03:30] 2025-02-22 00:03:11,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 01:03:30] 2025-02-22 00:03:11,110 | INFO     | did not find any defunct processes belonging to 1961686
[2025-02-22 01:03:30] 2025-02-22 00:03:11,129 | INFO     | did not find any defunct processes belonging to 1961686
[2025-02-22 01:03:30] 2025-02-22 00:03:11,129 | INFO     | ready for new job
[2025-02-22 01:03:30] 2025-02-22 00:03:11,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 01:03:30] 2025-02-22 00:03:11,132 | INFO     | **************************************
[2025-02-22 01:03:30] 2025-02-22 00:03:11,132 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 01:03:30] 2025-02-22 00:03:11,132 | INFO     | **************************************
[2025-02-22 01:03:30] 2025-02-22 00:03:11,132 | INFO     | 
[2025-02-22 01:03:30] 2025-02-22 00:03:11,140 | INFO     | architecture information:
[2025-02-22 01:03:30] 2025-02-22 00:03:11,140 | INFO     | executing command: cat /etc/os-release
[2025-02-22 01:03:30] 2025-02-22 00:03:11,167 | INFO     | cat /etc/os-release:
[2025-02-22 01:03:30] NAME="CentOS Linux"
[2025-02-22 01:03:30] VERSION="7 (Core)"
[2025-02-22 01:03:30] ID="centos"
[2025-02-22 01:03:30] ID_LIKE="rhel fedora"
[2025-02-22 01:03:30] VERSION_ID="7"
[2025-02-22 01:03:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 01:03:30] ANSI_COLOR="0;31"
[2025-02-22 01:03:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 01:03:30] HOME_URL="https://www.centos.org/"
[2025-02-22 01:03:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 01:03:30] 
[2025-02-22 01:03:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 01:03:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 01:03:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 01:03:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 01:03:30] 
[2025-02-22 01:03:30] 2025-02-22 00:03:11,167 | INFO     | **************************************
[2025-02-22 01:03:30] 2025-02-22 00:03:11,670 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-02-22 01:03:30] 2025-02-22 00:03:11,690 | INFO     | sufficient remaining disk space (3245911048192 B)
[2025-02-22 01:03:30] 2025-02-22 00:03:11,690 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 01:03:30] 2025-02-22 00:03:11,690 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 01:03:30] 2025-02-22 00:03:11,690 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 01:03:30] 2025-02-22 00:03:11,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 01:03:30] 2025-02-22 00:03:11,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 01:03:30] 2025-02-22 00:03:11,692 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 01:03:30] 2025-02-22 00:03:11,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 01:03:30] 2025-02-22 00:03:11,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 01:03:30] 2025-02-22 00:03:12,077 | INFO     | all payload control threads have been joined
[2025-02-22 01:03:30] 2025-02-22 00:03:12,126 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-22 01:03:30] 2025-02-22 00:03:12,126 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-22 01:03:30] 2025-02-22 00:03:12,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 01:03:30] 2025-02-22 00:03:12,127 | INFO     | will abort loop
[2025-02-22 01:03:30] 2025-02-22 00:03:12,461 | INFO     | all data control threads have been joined
[2025-02-22 01:03:30] 2025-02-22 00:03:12,695 | INFO     | [job] retrieve thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:12,734 | INFO     | [payload] validate_post thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:12,893 | INFO     | all job control threads have been joined
[2025-02-22 01:03:30] 2025-02-22 00:03:12,928 | INFO     | [job] validate thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:12,975 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:13,082 | INFO     | [payload] control thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:13,132 | INFO     | [job] job monitor thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:13,163 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:13,369 | INFO     | [payload] failed_post thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:13,467 | INFO     | [data] control thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:13,698 | INFO     | [data] copytool_out thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:13,847 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:13,899 | INFO     | [job] control thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:14,130 | INFO     | [data] copytool_in thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:14,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 01:03:30] 2025-02-22 00:03:15,483 | INFO     | [job] queue monitor thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:15,698 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:22,458 | INFO     | job.realtimelogging is not enabled
[2025-02-22 01:03:30] 2025-02-22 00:03:23,463 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 01:03:30] 2025-02-22 00:03:25,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23336729855808)>', '<ExcThread(monitor, started 23336291641088)>']
[2025-02-22 01:03:30] 2025-02-22 00:03:25,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 01:03:30] 2025-02-22 00:03:25,762 | INFO     | [monitor] control thread has ended
[2025-02-22 01:03:30] 2025-02-22 00:03:30,141 | INFO     | all workflow threads have been joined
[2025-02-22 01:03:30] 2025-02-22 00:03:30,141 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 01:03:30] 2025-02-22 00:03:30,142 | INFO     | traces error code: 0
[2025-02-22 01:03:30] 2025-02-22 00:03:30,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 01:03:30] 2025-02-22 00:03:30,265 [wrapper] ==== pilot stdout END ====
[2025-02-22 01:03:30] 2025-02-22 00:03:30,269 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 01:03:30] 2025-02-22 00:03:30,272 [wrapper] pilotpid: 1951522
[2025-02-22 01:03:30] 2025-02-22 00:03:30,274 [wrapper] Pilot exit status: 0
[2025-02-22 01:03:30] 2025-02-22 00:03:30,285 [wrapper] pandaids: 6519371898
[2025-02-22 01:03:30] 2025-02-22 00:03:30,426 [wrapper] cleanup supervisor_pilot 3651546 1951523
[2025-02-22 01:03:30] 2025-02-22 00:03:30,430 [wrapper] Test setup, not cleaning
[2025-02-22 01:03:30] 2025-02-22 00:03:30,436 [wrapper] apfmon messages muted
[2025-02-22 01:03:30] 2025-02-22 00:03:30,441 [wrapper] ==== wrapper stdout END ====
[2025-02-22 01:03:30] 2025-02-22 00:03:30,444 [wrapper] ==== wrapper stderr END ====
[2025-02-22 01:03:30]  *** Error codes and diagnostics ***
[2025-02-22 01:03:30]     "exeErrorCode": 0,
[2025-02-22 01:03:30]     "exeErrorDiag": "",
[2025-02-22 01:03:30]     "pilotErrorCode": 0,
[2025-02-22 01:03:30]     "pilotErrorDiag": "",
[2025-02-22 01:03:30]  *** Listing of results directory ***
[2025-02-22 01:03:30] total 670168
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc    491065 Feb 19 21:55 pilot3.tar.gz
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc      5118 Feb 19 22:03 queuedata.json
[2025-02-22 01:03:30] -rwx------ 1 boinc boinc     35865 Feb 19 22:04 runpilot2-wrapper.sh
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc       100 Feb 21 18:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 01:03:30] -rwxr-xr-x 1 boinc boinc      7986 Feb 21 18:42 run_atlas
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc       105 Feb 21 18:42 job.xml
[2025-02-22 01:03:30] -rw-r--r-- 2 boinc boinc 342767343 Feb 21 18:42 EVNT.43078917._002117.pool.root.1
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc      6675 Feb 21 18:42 init_data.xml
[2025-02-22 01:03:30] drwxrwx--x 2 boinc boinc      4096 Feb 21 18:42 shared
[2025-02-22 01:03:30] -rw-r--r-- 2 boinc boinc    503560 Feb 21 18:42 input.tar.gz
[2025-02-22 01:03:30] -rw-r--r-- 2 boinc boinc     17569 Feb 21 18:42 start_atlas.sh
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc         0 Feb 21 18:42 boinc_lockfile
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc      2549 Feb 21 18:42 pandaJob.out
[2025-02-22 01:03:30] -rw------- 1 boinc boinc       424 Feb 21 18:42 setup.sh.local
[2025-02-22 01:03:30] -rw------- 1 boinc boinc    987293 Feb 21 18:42 agis_schedconf.cvmfs.json
[2025-02-22 01:03:30] drwx------ 4 boinc boinc      4096 Feb 21 18:43 pilot3
[2025-02-22 01:03:30] -rw------- 1 boinc boinc 333734652 Feb 22 01:02 HITS.43078919._077161.pool.root.1
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc       532 Feb 22 01:02 boinc_task_state.xml
[2025-02-22 01:03:30] -rw------- 1 boinc boinc        95 Feb 22 01:02 pilot_heartbeat.json
[2025-02-22 01:03:30] -rw------- 1 boinc boinc      1033 Feb 22 01:02 memory_monitor_summary.json
[2025-02-22 01:03:30] -rw------- 1 boinc boinc   1582569 Feb 22 01:02 agis_ddmendpoints.agis.ALL.json
[2025-02-22 01:03:30] -rw------- 1 boinc boinc    461830 Feb 22 01:02 log.43078919._077161.job.log.tgz.1
[2025-02-22 01:03:30] -rw------- 1 boinc boinc      7704 Feb 22 01:03 heartbeat.json
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc      8192 Feb 22 01:03 boinc_mmap_file
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc        28 Feb 22 01:03 wrapper_checkpoint.txt
[2025-02-22 01:03:30] -rw------- 1 boinc boinc      4607 Feb 22 01:03 pilotlog.txt
[2025-02-22 01:03:30] -rw------- 1 boinc boinc   2509456 Feb 22 01:03 log.43078919._077161.job.log.1
[2025-02-22 01:03:30] -rw------- 1 boinc boinc       357 Feb 22 01:03 output.list
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc       620 Feb 22 01:03 runtime_log
[2025-02-22 01:03:30] -rw------- 1 boinc boinc   2990080 Feb 22 01:03 result.tar.gz
[2025-02-22 01:03:30] -rw------- 1 boinc boinc       666 Feb 22 01:03 wZTNDmjQ646n9Rq4apOajLDm4fhM0noT9bVoFjIUDmR3aKDm0FndPo.diag
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc     11424 Feb 22 01:03 runtime_log.err
[2025-02-22 01:03:30] -rw-r--r-- 1 boinc boinc     21372 Feb 22 01:03 stderr.txt
[2025-02-22 01:03:30] HITS file was successfully produced:
[2025-02-22 01:03:30] -rw------- 1 boinc boinc 333734652 Feb 22 01:02 shared/HITS.pool.root.1
[2025-02-22 01:03:30]  *** Contents of shared directory: ***
[2025-02-22 01:03:30] total 664092
[2025-02-22 01:03:30] -rw-r--r-- 2 boinc boinc 342767343 Feb 21 18:42 ATLAS.root_0
[2025-02-22 01:03:30] -rw-r--r-- 2 boinc boinc    503560 Feb 21 18:42 input.tar.gz
[2025-02-22 01:03:30] -rw-r--r-- 2 boinc boinc     17569 Feb 21 18:42 start_atlas.sh
[2025-02-22 01:03:30] -rw------- 1 boinc boinc 333734652 Feb 22 01:02 HITS.pool.root.1
[2025-02-22 01:03:30] -rw------- 1 boinc boinc   2990080 Feb 22 01:03 result.tar.gz
01:03:31 (1947521): run_atlas exited; CPU time 85687.745100
01:03:31 (1947521): called boinc_finish(0)

</stderr_txt>
]]>

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