Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:59:07 (923677): wrapper (7.7.26015): starting
20:59:07 (923677): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 20:59:07] Arguments: --nthreads 4
[2025-02-23 20:59:07] Threads: 4
[2025-02-23 20:59:07] Checking for CVMFS
[2025-02-23 20:59:07] No cvmfs_config command found, will try listing directly
[2025-02-23 20:59:07] CVMFS is ok
[2025-02-23 20:59:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 20:59:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 20:59:07] Further information can be found at the LHC@home message board.
[2025-02-23 20:59:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 20:59:07] Checking for apptainer binary...
[2025-02-23 20:59:07] which: no apptainer in ((null))
[2025-02-23 20:59:07] apptainer is not installed, using version from CVMFS
[2025-02-23 20:59:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 20:59:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-02-23 20:59:08] apptainer works
[2025-02-23 20:59:08] Set ATHENA_PROC_NUMBER=4
[2025-02-23 20:59:08] Set ATHENA_CORE_NUMBER=4
[2025-02-23 20:59:08] Starting ATLAS job with PandaID=6519086493
[2025-02-23 20:59:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 04:29:28]  *** The last 200 lines of the pilot log: ***
[2025-02-24 04:29:28] 2025-02-24 03:28:48,432 | INFO     | fitting pss+swap vs Time
[2025-02-24 04:29:28] 2025-02-24 03:28:48,432 | INFO     | model: linear, x: [1740340781.0, 1740340842.0, 1740340903.0, 1740340964.0, 1740341025.0, 1740341086.0, 1740341147.0, 1740341208.0, 1740341269.0, 1740341330.0, 1740
[2025-02-24 04:29:28] 2025-02-24 03:28:48,433 | INFO     | sum of square deviations: 26775834130.5
[2025-02-24 04:29:28] 2025-02-24 03:28:48,438 | INFO     | sum of deviations: 206915019347.49997
[2025-02-24 04:29:28] 2025-02-24 03:28:48,439 | INFO     | mean x: 1740354231.5
[2025-02-24 04:29:28] 2025-02-24 03:28:48,439 | INFO     | mean y: 2339649.305429864
[2025-02-24 04:29:28] 2025-02-24 03:28:48,439 | INFO     | -- intersect: -13446557133.041103
[2025-02-24 04:29:28] 2025-02-24 03:28:48,439 | INFO     | intersect: -13446557133.041103
[2025-02-24 04:29:28] 2025-02-24 03:28:48,440 | INFO     | chi2: 4.396893998193495
[2025-02-24 04:29:28] 2025-02-24 03:28:48,440 | INFO     | model: linear, x: [1740340781.0, 1740340842.0, 1740340903.0, 1740340964.0, 1740341025.0, 1740341086.0, 1740341147.0, 1740341208.0, 1740341269.0, 1740341330.0, 1740
[2025-02-24 04:29:28] 2025-02-24 03:28:48,441 | INFO     | sum of square deviations: 25877389378.0
[2025-02-24 04:29:28] 2025-02-24 03:28:48,446 | INFO     | sum of deviations: 230106119365.0
[2025-02-24 04:29:28] 2025-02-24 03:28:48,446 | INFO     | mean x: 1740354079.0
[2025-02-24 04:29:28] 2025-02-24 03:28:48,446 | INFO     | mean y: 2343545.3112128144
[2025-02-24 04:29:28] 2025-02-24 03:28:48,446 | INFO     | -- intersect: -15473179027.309662
[2025-02-24 04:29:28] 2025-02-24 03:28:48,446 | INFO     | intersect: -15473179027.309662
[2025-02-24 04:29:28] 2025-02-24 03:28:48,447 | INFO     | chi2: 3.7362067241315056
[2025-02-24 04:29:28] 2025-02-24 03:28:48,447 | INFO     | current chi2=3.7362067241315056 (change=15.026227021471051 %)
[2025-02-24 04:29:28] 2025-02-24 03:28:48,447 | INFO     | right removable region: 436
[2025-02-24 04:29:28] 2025-02-24 03:28:48,448 | INFO     | model: linear, x: [1740341086.0, 1740341147.0, 1740341208.0, 1740341269.0, 1740341330.0, 1740341391.0, 1740341452.0, 1740341513.0, 1740341574.0, 1740341635.0, 1740
[2025-02-24 04:29:28] 2025-02-24 03:28:48,448 | INFO     | sum of square deviations: 25877389378.0
[2025-02-24 04:29:28] 2025-02-24 03:28:48,454 | INFO     | sum of deviations: 102269572813.99998
[2025-02-24 04:29:28] 2025-02-24 03:28:48,454 | INFO     | mean x: 1740354384.0
[2025-02-24 04:29:28] 2025-02-24 03:28:48,454 | INFO     | mean y: 2357386.2265446223
[2025-02-24 04:29:28] 2025-02-24 03:28:48,454 | INFO     | -- intersect: -6875666389.539979
[2025-02-24 04:29:28] 2025-02-24 03:28:48,454 | INFO     | intersect: -6875666389.539979
[2025-02-24 04:29:28] 2025-02-24 03:28:48,455 | INFO     | chi2: 1.992828666537813
[2025-02-24 04:29:28] 2025-02-24 03:28:48,455 | INFO     | current chi2=1.992828666537813 (change=54.676445068801186 %)
[2025-02-24 04:29:28] 2025-02-24 03:28:48,456 | INFO     | model: linear, x: [1740341391.0, 1740341452.0, 1740341513.0, 1740341574.0, 1740341635.0, 1740341696.0, 1740341757.0, 1740341818.0, 1740341879.0, 1740341940.0, 1740
[2025-02-24 04:29:28] 2025-02-24 03:28:48,456 | INFO     | sum of square deviations: 24999270588.0
[2025-02-24 04:29:28] 2025-02-24 03:28:48,462 | INFO     | sum of deviations: 23674551949.0
[2025-02-24 04:29:28] 2025-02-24 03:28:48,462 | INFO     | mean x: 1740354536.5
[2025-02-24 04:29:28] 2025-02-24 03:28:48,462 | INFO     | mean y: 2371033.185185185
[2025-02-24 04:29:28] 2025-02-24 03:28:48,462 | INFO     | -- intersect: -1645761608.885766
[2025-02-24 04:29:28] 2025-02-24 03:28:48,463 | INFO     | intersect: -1645761608.885766
[2025-02-24 04:29:28] 2025-02-24 03:28:48,463 | INFO     | chi2: 0.7535562605485107
[2025-02-24 04:29:28] 2025-02-24 03:28:48,463 | INFO     | current chi2=0.7535562605485107 (change=62.18660072480384 %)
[2025-02-24 04:29:28] 2025-02-24 03:28:48,464 | INFO     | model: linear, x: [1740341696.0, 1740341757.0, 1740341818.0, 1740341879.0, 1740341940.0, 1740342001.0, 1740342062.0, 1740342123.0, 1740342184.0, 1740342245.0, 1740
[2025-02-24 04:29:28] 2025-02-24 03:28:48,464 | INFO     | sum of square deviations: 24141245198.0
[2025-02-24 04:29:28] 2025-02-24 03:28:48,469 | INFO     | sum of deviations: 10481788050.99982
[2025-02-24 04:29:28] 2025-02-24 03:28:48,469 | INFO     | mean x: 1740354689.0
[2025-02-24 04:29:28] 2025-02-24 03:28:48,470 | INFO     | mean y: 2373365.3278688523
[2025-02-24 04:29:28] 2025-02-24 03:28:48,470 | INFO     | -- intersect: -753264085.6008424
[2025-02-24 04:29:28] 2025-02-24 03:28:48,470 | INFO     | intersect: -753264085.6008424
[2025-02-24 04:29:28] 2025-02-24 03:28:48,471 | INFO     | chi2: 0.6966878021046842
[2025-02-24 04:29:28] 2025-02-24 03:28:48,471 | INFO     | current chi2=0.6966878021046842 (change=7.546677192016447 %)
[2025-02-24 04:29:28] 2025-02-24 03:28:48,471 | INFO     | left removable region: 30
[2025-02-24 04:29:28] 2025-02-24 03:28:48,472 | INFO     | model: linear, x: [1740342611.0, 1740342672.0, 1740342733.0, 1740342794.0, 1740342855.0, 1740342916.0, 1740342977.0, 1740343038.0, 1740343099.0, 1740343160.0, 1740
[2025-02-24 04:29:28] 2025-02-24 03:28:48,472 | INFO     | sum of square deviations: 20751710017.5
[2025-02-24 04:29:28] 2025-02-24 03:28:48,477 | INFO     | sum of deviations: 27485922961.0
[2025-02-24 04:29:28] 2025-02-24 03:28:48,477 | INFO     | mean x: 1740354963.5
[2025-02-24 04:29:28] 2025-02-24 03:28:48,477 | INFO     | mean y: 2379165.438423645
[2025-02-24 04:29:28] 2025-02-24 03:28:48,477 | INFO     | -- intersect: -2302744721.2781553
[2025-02-24 04:29:28] 2025-02-24 03:28:48,478 | INFO     | intersect: -2302744721.2781553
[2025-02-24 04:29:28] 2025-02-24 03:28:48,478 | INFO     | chi2: 0.0018879260206758866
[2025-02-24 04:29:28] 2025-02-24 03:28:48,478 | INFO     | -- intersect: -2302744721.2781553
[2025-02-24 04:29:28] 2025-02-24 03:28:48,479 | INFO     | current memory leak: 1.32 B/s (using 406 data points, chi2=0.00)
[2025-02-24 04:29:28] 2025-02-24 03:28:48,479 | INFO     | ..............................
[2025-02-24 04:29:28] 2025-02-24 03:28:48,479 | INFO     | . Timing measurements:
[2025-02-24 04:29:28] 2025-02-24 03:28:48,480 | INFO     | . get job = 0 s
[2025-02-24 04:29:28] 2025-02-24 03:28:48,480 | INFO     | . initial setup = 1 s
[2025-02-24 04:29:28] 2025-02-24 03:28:48,480 | INFO     | . payload setup = 5 s
[2025-02-24 04:29:28] 2025-02-24 03:28:48,480 | INFO     | . stage-in = 0 s
[2025-02-24 04:29:28] 2025-02-24 03:28:48,480 | INFO     | . payload execution = 26938 s
[2025-02-24 04:29:28] 2025-02-24 03:28:48,480 | INFO     | . stage-out = 1 s
[2025-02-24 04:29:28] 2025-02-24 03:28:48,480 | INFO     | . log creation = 0 s
[2025-02-24 04:29:28] 2025-02-24 03:28:48,480 | INFO     | ..............................
[2025-02-24 04:29:28] 2025-02-24 03:28:49,083 | INFO     | 
[2025-02-24 04:29:28] 2025-02-24 03:28:49,084 | INFO     | job summary report
[2025-02-24 04:29:28] 2025-02-24 03:28:49,084 | INFO     | --------------------------------------------------
[2025-02-24 04:29:28] 2025-02-24 03:28:49,084 | INFO     | PanDA job id: 6519086493
[2025-02-24 04:29:28] 2025-02-24 03:28:49,084 | INFO     | task id: 43205075
[2025-02-24 04:29:28] 2025-02-24 03:28:49,084 | INFO     | errors: (none)
[2025-02-24 04:29:28] 2025-02-24 03:28:49,084 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 04:29:28] 2025-02-24 03:28:49,085 | INFO     | pilot state: finished 
[2025-02-24 04:29:28] 2025-02-24 03:28:49,085 | INFO     | transexitcode: 0
[2025-02-24 04:29:28] 2025-02-24 03:28:49,085 | INFO     | exeerrorcode: 0
[2025-02-24 04:29:28] 2025-02-24 03:28:49,085 | INFO     | exeerrordiag: 
[2025-02-24 04:29:28] 2025-02-24 03:28:49,085 | INFO     | exitcode: 0
[2025-02-24 04:29:28] 2025-02-24 03:28:49,085 | INFO     | exitmsg: OK
[2025-02-24 04:29:28] 2025-02-24 03:28:49,085 | INFO     | cpuconsumptiontime: 103394 s
[2025-02-24 04:29:28] 2025-02-24 03:28:49,085 | INFO     | nevents: 400
[2025-02-24 04:29:28] 2025-02-24 03:28:49,086 | INFO     | neventsw: 0
[2025-02-24 04:29:28] 2025-02-24 03:28:49,086 | INFO     | pid: 934082
[2025-02-24 04:29:28] 2025-02-24 03:28:49,086 | INFO     | pgrp: 934082
[2025-02-24 04:29:28] 2025-02-24 03:28:49,086 | INFO     | corecount: 4
[2025-02-24 04:29:28] 2025-02-24 03:28:49,086 | INFO     | event service: False
[2025-02-24 04:29:28] 2025-02-24 03:28:49,086 | INFO     | sizes: {0: 2383208, 1: 2383407, 5: 2383613, 11: 2383669, 26947: 2419930, 26948: 2419929, 26949: 2429076, 26952: 2429132, 26957: 2429302}
[2025-02-24 04:29:28] 2025-02-24 03:28:49,086 | INFO     | --------------------------------------------------
[2025-02-24 04:29:28] 2025-02-24 03:28:49,086 | INFO     | 
[2025-02-24 04:29:28] 2025-02-24 03:28:49,087 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-02-24 04:29:28] 2025-02-24 03:28:49,105 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,105 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,105 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,106 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,106 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,106 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,107 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 04:29:28] 2025-02-24 03:28:49,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,107 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 04:29:28] 2025-02-24 03:28:49,108 | INFO     | job 6519086493 has completed (purged errors)
[2025-02-24 04:29:28] 2025-02-24 03:28:49,108 | INFO     | overall cleanup function is called
[2025-02-24 04:29:28] 2025-02-24 03:28:50,116 | INFO     | --- collectZombieJob: --- 10, [934082]
[2025-02-24 04:29:28] 2025-02-24 03:28:50,116 | INFO     | zombie collector waiting for pid 934082
[2025-02-24 04:29:28] 2025-02-24 03:28:50,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 04:29:28] 2025-02-24 03:28:50,116 | INFO     | collected zombie processes
[2025-02-24 04:29:28] 2025-02-24 03:28:50,116 | INFO     | will attempt to kill all subprocesses of pid=934082
[2025-02-24 04:29:28] 2025-02-24 03:28:50,238 | INFO     | process IDs to be killed: [934082] (in reverse order)
[2025-02-24 04:29:28] 2025-02-24 03:28:50,329 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 04:29:28] 2025-02-24 03:28:50,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 04:29:28] 2025-02-24 03:28:50,337 | INFO     | did not find any defunct processes belonging to 934082
[2025-02-24 04:29:28] 2025-02-24 03:28:50,344 | INFO     | did not find any defunct processes belonging to 934082
[2025-02-24 04:29:28] 2025-02-24 03:28:50,344 | INFO     | ready for new job
[2025-02-24 04:29:28] 2025-02-24 03:28:50,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 04:29:28] 2025-02-24 03:28:50,348 | INFO     | **************************************
[2025-02-24 04:29:28] 2025-02-24 03:28:50,348 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 04:29:28] 2025-02-24 03:28:50,348 | INFO     | **************************************
[2025-02-24 04:29:28] 2025-02-24 03:28:50,348 | INFO     | 
[2025-02-24 04:29:28] 2025-02-24 03:28:50,351 | INFO     | architecture information:
[2025-02-24 04:29:28] 2025-02-24 03:28:50,351 | INFO     | executing command: cat /etc/os-release
[2025-02-24 04:29:28] 2025-02-24 03:28:50,366 | INFO     | cat /etc/os-release:
[2025-02-24 04:29:28] NAME="CentOS Linux"
[2025-02-24 04:29:28] VERSION="7 (Core)"
[2025-02-24 04:29:28] ID="centos"
[2025-02-24 04:29:28] ID_LIKE="rhel fedora"
[2025-02-24 04:29:28] VERSION_ID="7"
[2025-02-24 04:29:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 04:29:28] ANSI_COLOR="0;31"
[2025-02-24 04:29:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 04:29:28] HOME_URL="https://www.centos.org/"
[2025-02-24 04:29:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 04:29:28] 
[2025-02-24 04:29:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 04:29:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 04:29:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 04:29:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 04:29:28] 
[2025-02-24 04:29:28] 2025-02-24 03:28:50,366 | INFO     | **************************************
[2025-02-24 04:29:28] 2025-02-24 03:28:50,868 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-02-24 04:29:28] 2025-02-24 03:28:50,883 | INFO     | sufficient remaining disk space (1638049775616 B)
[2025-02-24 04:29:28] 2025-02-24 03:28:50,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 04:29:28] 2025-02-24 03:28:50,884 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 04:29:28] 2025-02-24 03:28:50,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 04:29:28] 2025-02-24 03:28:50,901 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-24 04:29:28] 2025-02-24 03:28:50,901 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-24 04:29:28] 2025-02-24 03:28:50,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 04:29:28] 2025-02-24 03:28:50,902 | INFO     | will abort loop
[2025-02-24 04:29:28] 2025-02-24 03:28:51,421 | INFO     | all data control threads have been joined
[2025-02-24 04:29:28] 2025-02-24 03:28:51,451 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 04:29:28] 2025-02-24 03:28:51,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 04:29:28] 2025-02-24 03:28:51,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 04:29:28] 2025-02-24 03:28:51,603 | INFO     | all payload control threads have been joined
[2025-02-24 04:29:28] 2025-02-24 03:28:51,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 04:29:28] 2025-02-24 03:28:51,889 | INFO     | [job] retrieve thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:51,893 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:51,907 | INFO     | [job] job monitor thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:51,929 | INFO     | [payload] validate_post thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:52,195 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:52,265 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:52,425 | INFO     | [data] control thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:52,460 | INFO     | all job control threads have been joined
[2025-02-24 04:29:28] 2025-02-24 03:28:52,607 | INFO     | [payload] control thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:52,656 | INFO     | [job] validate thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:52,811 | INFO     | [data] copytool_in thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:53,097 | INFO     | [payload] failed_post thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:53,466 | INFO     | [job] control thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:53,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 04:29:28] 2025-02-24 03:28:53,688 | INFO     | [data] copytool_out thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:54,614 | INFO     | [job] queue monitor thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:28:54,890 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:29:01,739 | INFO     | job.realtimelogging is not enabled
[2025-02-24 04:29:28] 2025-02-24 03:29:02,744 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 04:29:28] 2025-02-24 03:29:04,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22935201544000)>', '<ExcThread(monitor, started 22934968043264)>']
[2025-02-24 04:29:28] 2025-02-24 03:29:04,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 04:29:28] 2025-02-24 03:29:04,512 | INFO     | [monitor] control thread has ended
[2025-02-24 04:29:28] 2025-02-24 03:29:09,279 | INFO     | all workflow threads have been joined
[2025-02-24 04:29:28] 2025-02-24 03:29:09,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 04:29:28] 2025-02-24 03:29:09,280 | INFO     | traces error code: 0
[2025-02-24 04:29:28] 2025-02-24 03:29:09,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 04:29:28] 2025-02-24 03:29:09,393 [wrapper] ==== pilot stdout END ====
[2025-02-24 04:29:28] 2025-02-24 03:29:09,396 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 04:29:28] 2025-02-24 03:29:09,398 [wrapper] pilotpid: 927304
[2025-02-24 04:29:28] 2025-02-24 03:29:09,401 [wrapper] Pilot exit status: 0
[2025-02-24 04:29:28] 2025-02-24 03:29:09,410 [wrapper] pandaids: 6519086493
[2025-02-24 04:29:28] 2025-02-24 03:29:09,456 [wrapper] cleanup supervisor_pilot 1487195 927305
[2025-02-24 04:29:28] 2025-02-24 03:29:09,458 [wrapper] Test setup, not cleaning
[2025-02-24 04:29:28] 2025-02-24 03:29:09,463 [wrapper] apfmon messages muted
[2025-02-24 04:29:28] 2025-02-24 03:29:09,465 [wrapper] ==== wrapper stdout END ====
[2025-02-24 04:29:28] 2025-02-24 03:29:09,467 [wrapper] ==== wrapper stderr END ====
[2025-02-24 04:29:28]  *** Error codes and diagnostics ***
[2025-02-24 04:29:28]     "exeErrorCode": 0,
[2025-02-24 04:29:28]     "exeErrorDiag": "",
[2025-02-24 04:29:28]     "pilotErrorCode": 0,
[2025-02-24 04:29:28]     "pilotErrorDiag": "",
[2025-02-24 04:29:28]  *** Listing of results directory ***
[2025-02-24 04:29:28] total 665380
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc    491065 Feb 19 18:07 pilot3.tar.gz
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc      5118 Feb 19 18:10 queuedata.json
[2025-02-24 04:29:28] -rwx------ 1 boinc boinc     35865 Feb 19 18:11 runpilot2-wrapper.sh
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc       100 Feb 23 20:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 04:29:28] -rwxr-xr-x 1 boinc boinc      7986 Feb 23 20:59 run_atlas
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc       105 Feb 23 20:59 job.xml
[2025-02-24 04:29:28] -rw-r--r-- 2 boinc boinc 344247808 Feb 23 20:59 EVNT.43092757._000795.pool.root.1
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc      6420 Feb 23 20:59 init_data.xml
[2025-02-24 04:29:28] -rw-r--r-- 2 boinc boinc    503561 Feb 23 20:59 input.tar.gz
[2025-02-24 04:29:28] drwxrwx--x 2 boinc boinc      4096 Feb 23 20:59 shared
[2025-02-24 04:29:28] -rw-r--r-- 2 boinc boinc     17569 Feb 23 20:59 start_atlas.sh
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc         0 Feb 23 20:59 boinc_lockfile
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc      2556 Feb 23 20:59 pandaJob.out
[2025-02-24 04:29:28] -rw------- 1 boinc boinc       424 Feb 23 20:59 setup.sh.local
[2025-02-24 04:29:28] -rw------- 1 boinc boinc    987744 Feb 23 20:59 agis_schedconf.cvmfs.json
[2025-02-24 04:29:28] drwx------ 4 boinc boinc      4096 Feb 23 20:59 pilot3
[2025-02-24 04:29:28] -rw------- 1 boinc boinc 325854382 Feb 24 04:27 HITS.43205075._051230.pool.root.1
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc       532 Feb 24 04:27 boinc_task_state.xml
[2025-02-24 04:29:28] -rw------- 1 boinc boinc      1038 Feb 24 04:28 memory_monitor_summary.json
[2025-02-24 04:29:28] -rw------- 1 boinc boinc        95 Feb 24 04:28 pilot_heartbeat.json
[2025-02-24 04:29:28] -rw------- 1 boinc boinc   1582569 Feb 24 04:28 agis_ddmendpoints.agis.ALL.json
[2025-02-24 04:29:28] -rw------- 1 boinc boinc    512637 Feb 24 04:28 log.43205075._051230.job.log.tgz.1
[2025-02-24 04:29:28] -rw------- 1 boinc boinc      7750 Feb 24 04:28 heartbeat.json
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc      8192 Feb 24 04:29 boinc_mmap_file
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc        29 Feb 24 04:29 wrapper_checkpoint.txt
[2025-02-24 04:29:28] -rw------- 1 boinc boinc      4484 Feb 24 04:29 pilotlog.txt
[2025-02-24 04:29:28] -rw------- 1 boinc boinc   3204344 Feb 24 04:29 log.43205075._051230.job.log.1
[2025-02-24 04:29:28] -rw------- 1 boinc boinc       357 Feb 24 04:29 output.list
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc       620 Feb 24 04:29 runtime_log
[2025-02-24 04:29:28] -rw------- 1 boinc boinc   3737600 Feb 24 04:29 result.tar.gz
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc     11424 Feb 24 04:29 runtime_log.err
[2025-02-24 04:29:28] -rw------- 1 boinc boinc       667 Feb 24 04:29 gsXNDmTm246n9Rq4apOajLDm4fhM0noT9bVoFjIUDmomaKDmMsXDZm.diag
[2025-02-24 04:29:28] -rw-r--r-- 1 boinc boinc     21326 Feb 24 04:29 stderr.txt
[2025-02-24 04:29:28] HITS file was successfully produced:
[2025-02-24 04:29:28] -rw------- 1 boinc boinc 325854382 Feb 24 04:27 shared/HITS.pool.root.1
[2025-02-24 04:29:28]  *** Contents of shared directory: ***
[2025-02-24 04:29:28] total 658572
[2025-02-24 04:29:28] -rw-r--r-- 2 boinc boinc 344247808 Feb 23 20:59 ATLAS.root_0
[2025-02-24 04:29:28] -rw-r--r-- 2 boinc boinc    503561 Feb 23 20:59 input.tar.gz
[2025-02-24 04:29:28] -rw-r--r-- 2 boinc boinc     17569 Feb 23 20:59 start_atlas.sh
[2025-02-24 04:29:28] -rw------- 1 boinc boinc 325854382 Feb 24 04:27 HITS.pool.root.1
[2025-02-24 04:29:28] -rw------- 1 boinc boinc   3737600 Feb 24 04:29 result.tar.gz
04:29:30 (923677): run_atlas exited; CPU time 103538.377499
04:29:30 (923677): called boinc_finish(0)

</stderr_txt>
]]>

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