Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:35:53 (3946214): wrapper (7.7.26015): starting
11:35:53 (3946214): wrapper: running run_atlas (--nthreads 4)
[2025-02-20 11:35:53] Arguments: --nthreads 4
[2025-02-20 11:35:53] Threads: 4
[2025-02-20 11:35:53] Checking for CVMFS
[2025-02-20 11:35:53] No cvmfs_config command found, will try listing directly
[2025-02-20 11:35:53] CVMFS is ok
[2025-02-20 11:35:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 11:35:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 11:35:53] Further information can be found at the LHC@home message board.
[2025-02-20 11:35:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 11:35:53] Checking for apptainer binary...
[2025-02-20 11:35:53] which: no apptainer in ((null))
[2025-02-20 11:35:53] apptainer is not installed, using version from CVMFS
[2025-02-20 11:35:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 11:35:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-02-20 11:35:53] apptainer works
[2025-02-20 11:35:53] Set ATHENA_PROC_NUMBER=4
[2025-02-20 11:35:53] Set ATHENA_CORE_NUMBER=4
[2025-02-20 11:35:53] Starting ATLAS job with PandaID=6518838855
[2025-02-20 11:35:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-20 17:36:13]  *** The last 200 lines of the pilot log: ***
[2025-02-20 17:36:13] 2025-02-20 16:35:53,525 | INFO     | sum of deviations: 150625830937.00003
[2025-02-20 17:36:13] 2025-02-20 16:35:53,525 | INFO     | mean x: 1740058568.5
[2025-02-20 17:36:13] 2025-02-20 16:35:53,526 | INFO     | mean y: 2335638.485875706
[2025-02-20 17:36:13] 2025-02-20 16:35:53,526 | INFO     | -- intersect: -19051331664.468815
[2025-02-20 17:36:13] 2025-02-20 16:35:53,526 | INFO     | intersect: -19051331664.468815
[2025-02-20 17:36:13] 2025-02-20 16:35:53,526 | INFO     | chi2: 4.372004436808011
[2025-02-20 17:36:13] 2025-02-20 16:35:53,527 | INFO     | model: linear, x: [1740047802.0, 1740047863.0, 1740047924.0, 1740047985.0, 1740048046.0, 1740048107.0, 1740048168.0, 1740048229.0, 1740048290.0, 1740048351.0, 1740
[2025-02-20 17:36:13] 2025-02-20 16:35:53,527 | INFO     | sum of square deviations: 13181084350.0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,530 | INFO     | sum of deviations: 169471056684.0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,530 | INFO     | mean x: 1740058416.0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,531 | INFO     | mean y: 2340574.8911174787
[2025-02-20 17:36:13] 2025-02-20 16:35:53,531 | INFO     | -- intersect: -22369835387.354908
[2025-02-20 17:36:13] 2025-02-20 16:35:53,531 | INFO     | intersect: -22369835387.354908
[2025-02-20 17:36:13] 2025-02-20 16:35:53,531 | INFO     | chi2: 3.684509976585385
[2025-02-20 17:36:13] 2025-02-20 16:35:53,531 | INFO     | current chi2=3.684509976585385 (change=15.724925950088098 %)
[2025-02-20 17:36:13] 2025-02-20 16:35:53,531 | INFO     | right removable region: 348
[2025-02-20 17:36:13] 2025-02-20 16:35:53,532 | INFO     | model: linear, x: [1740048107.0, 1740048168.0, 1740048229.0, 1740048290.0, 1740048351.0, 1740048412.0, 1740048473.0, 1740048534.0, 1740048595.0, 1740048656.0, 1740
[2025-02-20 17:36:13] 2025-02-20 16:35:53,532 | INFO     | sum of square deviations: 13181084350.0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,535 | INFO     | sum of deviations: 68950232358.0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,535 | INFO     | mean x: 1740058721.0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,535 | INFO     | mean y: 2357271.2349570203
[2025-02-20 17:36:13] 2025-02-20 16:35:53,536 | INFO     | -- intersect: -9099887274.337221
[2025-02-20 17:36:13] 2025-02-20 16:35:53,536 | INFO     | intersect: -9099887274.337221
[2025-02-20 17:36:13] 2025-02-20 16:35:53,536 | INFO     | chi2: 2.044895208852026
[2025-02-20 17:36:13] 2025-02-20 16:35:53,536 | INFO     | current chi2=2.044895208852026 (change=53.227512954103986 %)
[2025-02-20 17:36:13] 2025-02-20 16:35:53,537 | INFO     | model: linear, x: [1740048412.0, 1740048473.0, 1740048534.0, 1740048595.0, 1740048656.0, 1740048717.0, 1740048778.0, 1740048839.0, 1740048900.0, 1740048961.0, 1740
[2025-02-20 17:36:13] 2025-02-20 16:35:53,537 | INFO     | sum of square deviations: 12622636670.0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,541 | INFO     | sum of deviations: 6000720761.5
[2025-02-20 17:36:13] 2025-02-20 16:35:53,541 | INFO     | mean x: 1740058873.5
[2025-02-20 17:36:13] 2025-02-20 16:35:53,541 | INFO     | mean y: 2374461.479651163
[2025-02-20 17:36:13] 2025-02-20 16:35:53,541 | INFO     | -- intersect: -824838400.7316282
[2025-02-20 17:36:13] 2025-02-20 16:35:53,541 | INFO     | intersect: -824838400.7316282
[2025-02-20 17:36:13] 2025-02-20 16:35:53,541 | INFO     | chi2: 0.791611595882158
[2025-02-20 17:36:13] 2025-02-20 16:35:53,542 | INFO     | current chi2=0.791611595882158 (change=61.28840282595425 %)
[2025-02-20 17:36:13] 2025-02-20 16:35:53,542 | INFO     | model: linear, x: [1740048717.0, 1740048778.0, 1740048839.0, 1740048900.0, 1740048961.0, 1740049022.0, 1740049083.0, 1740049144.0, 1740049205.0, 1740049266.0, 1740
[2025-02-20 17:36:13] 2025-02-20 16:35:53,542 | INFO     | sum of square deviations: 12080189290.0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,545 | INFO     | sum of deviations: -5077646648.999998
[2025-02-20 17:36:13] 2025-02-20 16:35:53,546 | INFO     | mean x: 1740059026.0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,546 | INFO     | mean y: 2377558.274336283
[2025-02-20 17:36:13] 2025-02-20 16:35:53,546 | INFO     | -- intersect: 733773786.4563785
[2025-02-20 17:36:13] 2025-02-20 16:35:53,546 | INFO     | intersect: 733773786.4563785
[2025-02-20 17:36:13] 2025-02-20 16:35:53,546 | INFO     | chi2: 0.7288873822454967
[2025-02-20 17:36:13] 2025-02-20 16:35:53,546 | INFO     | current chi2=0.7288873822454967 (change=7.923609755458749 %)
[2025-02-20 17:36:13] 2025-02-20 16:35:53,546 | INFO     | left removable region: 30
[2025-02-20 17:36:13] 2025-02-20 16:35:53,547 | INFO     | model: linear, x: [1740049632.0, 1740049693.0, 1740049754.0, 1740049815.0, 1740049876.0, 1740049937.0, 1740049998.0, 1740050059.0, 1740050120.0, 1740050181.0, 1740
[2025-02-20 17:36:13] 2025-02-20 16:35:53,547 | INFO     | sum of square deviations: 9971385099.5
[2025-02-20 17:36:13] 2025-02-20 16:35:53,550 | INFO     | sum of deviations: 13339055744.999958
[2025-02-20 17:36:13] 2025-02-20 16:35:53,550 | INFO     | mean x: 1740059300.5
[2025-02-20 17:36:13] 2025-02-20 16:35:53,550 | INFO     | mean y: 2383762.9496855345
[2025-02-20 17:36:13] 2025-02-20 16:35:53,550 | INFO     | -- intersect: -2325351830.1866183
[2025-02-20 17:36:13] 2025-02-20 16:35:53,550 | INFO     | intersect: -2325351830.1866183
[2025-02-20 17:36:13] 2025-02-20 16:35:53,551 | INFO     | chi2: 0.004618280383554226
[2025-02-20 17:36:13] 2025-02-20 16:35:53,551 | INFO     | -- intersect: -2325351830.1866183
[2025-02-20 17:36:13] 2025-02-20 16:35:53,551 | INFO     | current memory leak: 1.34 B/s (using 318 data points, chi2=0.00)
[2025-02-20 17:36:13] 2025-02-20 16:35:53,552 | INFO     | ..............................
[2025-02-20 17:36:13] 2025-02-20 16:35:53,552 | INFO     | . Timing measurements:
[2025-02-20 17:36:13] 2025-02-20 16:35:53,552 | INFO     | . get job = 0 s
[2025-02-20 17:36:13] 2025-02-20 16:35:53,553 | INFO     | . initial setup = 1 s
[2025-02-20 17:36:13] 2025-02-20 16:35:53,553 | INFO     | . payload setup = 9 s
[2025-02-20 17:36:13] 2025-02-20 16:35:53,553 | INFO     | . stage-in = 0 s
[2025-02-20 17:36:13] 2025-02-20 16:35:53,553 | INFO     | . payload execution = 21545 s
[2025-02-20 17:36:13] 2025-02-20 16:35:53,553 | INFO     | . stage-out = 1 s
[2025-02-20 17:36:13] 2025-02-20 16:35:53,553 | INFO     | . log creation = 0 s
[2025-02-20 17:36:13] 2025-02-20 16:35:53,553 | INFO     | ..............................
[2025-02-20 17:36:13] 2025-02-20 16:35:53,655 | INFO     | 
[2025-02-20 17:36:13] 2025-02-20 16:35:53,655 | INFO     | job summary report
[2025-02-20 17:36:13] 2025-02-20 16:35:53,655 | INFO     | --------------------------------------------------
[2025-02-20 17:36:13] 2025-02-20 16:35:53,656 | INFO     | PanDA job id: 6518838855
[2025-02-20 17:36:13] 2025-02-20 16:35:53,656 | INFO     | task id: 43205075
[2025-02-20 17:36:13] 2025-02-20 16:35:53,656 | INFO     | errors: (none)
[2025-02-20 17:36:13] 2025-02-20 16:35:53,656 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-20 17:36:13] 2025-02-20 16:35:53,656 | INFO     | pilot state: finished 
[2025-02-20 17:36:13] 2025-02-20 16:35:53,656 | INFO     | transexitcode: 0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,656 | INFO     | exeerrorcode: 0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,656 | INFO     | exeerrordiag: 
[2025-02-20 17:36:13] 2025-02-20 16:35:53,656 | INFO     | exitcode: 0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,656 | INFO     | exitmsg: OK
[2025-02-20 17:36:13] 2025-02-20 16:35:53,656 | INFO     | cpuconsumptiontime: 82842 s
[2025-02-20 17:36:13] 2025-02-20 16:35:53,657 | INFO     | nevents: 400
[2025-02-20 17:36:13] 2025-02-20 16:35:53,657 | INFO     | neventsw: 0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,657 | INFO     | pid: 3957766
[2025-02-20 17:36:13] 2025-02-20 16:35:53,657 | INFO     | pgrp: 3957766
[2025-02-20 17:36:13] 2025-02-20 16:35:53,657 | INFO     | corecount: 4
[2025-02-20 17:36:13] 2025-02-20 16:35:53,657 | INFO     | event service: False
[2025-02-20 17:36:13] 2025-02-20 16:35:53,657 | INFO     | sizes: {0: 2389389, 7: 2389595, 11: 2389623, 21558: 2422866, 21560: 2431829, 21561: 2431885, 21568: 2432183}
[2025-02-20 17:36:13] 2025-02-20 16:35:53,657 | INFO     | --------------------------------------------------
[2025-02-20 17:36:13] 2025-02-20 16:35:53,657 | INFO     | 
[2025-02-20 17:36:13] 2025-02-20 16:35:53,657 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-02-20 17:36:13] 2025-02-20 16:35:53,689 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,690 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,690 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,690 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,692 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-20 17:36:13] 2025-02-20 16:35:53,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,692 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-20 17:36:13] 2025-02-20 16:35:53,692 | INFO     | job 6518838855 has completed (purged errors)
[2025-02-20 17:36:13] 2025-02-20 16:35:53,692 | INFO     | overall cleanup function is called
[2025-02-20 17:36:13] 2025-02-20 16:35:54,265 | INFO     | PID=3950288 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-20 17:36:13] 2025-02-20 16:35:54,265 | INFO     | .. there are 27 such processes running
[2025-02-20 17:36:13] 2025-02-20 16:35:54,703 | INFO     | --- collectZombieJob: --- 10, [3957766]
[2025-02-20 17:36:13] 2025-02-20 16:35:54,703 | INFO     | zombie collector waiting for pid 3957766
[2025-02-20 17:36:13] 2025-02-20 16:35:54,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-20 17:36:13] 2025-02-20 16:35:54,704 | INFO     | collected zombie processes
[2025-02-20 17:36:13] 2025-02-20 16:35:54,704 | INFO     | will attempt to kill all subprocesses of pid=3957766
[2025-02-20 17:36:13] 2025-02-20 16:35:55,053 | INFO     | process IDs to be killed: [3957766] (in reverse order)
[2025-02-20 17:36:13] 2025-02-20 16:35:55,340 | WARNING  | found no corresponding commands to process id(s)
[2025-02-20 17:36:13] 2025-02-20 16:35:55,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-20 17:36:13] 2025-02-20 16:35:55,369 | INFO     | did not find any defunct processes belonging to 3957766
[2025-02-20 17:36:13] 2025-02-20 16:35:55,393 | INFO     | did not find any defunct processes belonging to 3957766
[2025-02-20 17:36:13] 2025-02-20 16:35:55,393 | INFO     | ready for new job
[2025-02-20 17:36:13] 2025-02-20 16:35:55,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-20 17:36:13] 2025-02-20 16:35:55,396 | INFO     | **************************************
[2025-02-20 17:36:13] 2025-02-20 16:35:55,396 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-20 17:36:13] 2025-02-20 16:35:55,396 | INFO     | **************************************
[2025-02-20 17:36:13] 2025-02-20 16:35:55,396 | INFO     | 
[2025-02-20 17:36:13] 2025-02-20 16:35:55,405 | INFO     | architecture information:
[2025-02-20 17:36:13] 2025-02-20 16:35:55,406 | INFO     | executing command: cat /etc/os-release
[2025-02-20 17:36:13] 2025-02-20 16:35:55,432 | INFO     | cat /etc/os-release:
[2025-02-20 17:36:13] NAME="CentOS Linux"
[2025-02-20 17:36:13] VERSION="7 (Core)"
[2025-02-20 17:36:13] ID="centos"
[2025-02-20 17:36:13] ID_LIKE="rhel fedora"
[2025-02-20 17:36:13] VERSION_ID="7"
[2025-02-20 17:36:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-20 17:36:13] ANSI_COLOR="0;31"
[2025-02-20 17:36:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-20 17:36:13] HOME_URL="https://www.centos.org/"
[2025-02-20 17:36:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-20 17:36:13] 
[2025-02-20 17:36:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-20 17:36:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-20 17:36:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-20 17:36:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-20 17:36:13] 
[2025-02-20 17:36:13] 2025-02-20 16:35:55,432 | INFO     | **************************************
[2025-02-20 17:36:13] 2025-02-20 16:35:55,934 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-02-20 17:36:13] 2025-02-20 16:35:55,957 | INFO     | sufficient remaining disk space (3264767590400 B)
[2025-02-20 17:36:13] 2025-02-20 16:35:55,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-20 17:36:13] 2025-02-20 16:35:55,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-20 17:36:13] 2025-02-20 16:35:56,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-20 17:36:13] 2025-02-20 16:35:56,270 | INFO     | found 0 job(s) in 20 queues
[2025-02-20 17:36:13] 2025-02-20 16:35:56,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-20 17:36:13] 2025-02-20 16:35:56,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-20 17:36:13] 2025-02-20 16:35:56,352 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-20 17:36:13] 2025-02-20 16:35:56,352 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-20 17:36:13] 2025-02-20 16:35:56,352 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-20 17:36:13] 2025-02-20 16:35:56,353 | INFO     | will abort loop
[2025-02-20 17:36:13] 2025-02-20 16:35:56,644 | INFO     | all data control threads have been joined
[2025-02-20 17:36:13] 2025-02-20 16:35:56,661 | INFO     | all job control threads have been joined
[2025-02-20 17:36:13] 2025-02-20 16:35:56,748 | INFO     | all payload control threads have been joined
[2025-02-20 17:36:13] 2025-02-20 16:35:56,962 | INFO     | [job] retrieve thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:57,117 | INFO     | [job] validate thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:57,200 | INFO     | [payload] execute_payloads thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:57,254 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-20 17:36:13] 2025-02-20 16:35:57,263 | INFO     | [payload] validate_pre thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:57,358 | INFO     | [job] job monitor thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:57,360 | INFO     | [data] copytool_in thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:57,649 | INFO     | [data] control thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:57,666 | INFO     | [job] control thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:57,752 | INFO     | [payload] control thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:58,099 | INFO     | [payload] validate_post thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:58,235 | INFO     | [data] copytool_out thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:58,312 | INFO     | [job] create_data_payload thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:58,512 | INFO     | [payload] failed_post thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:35:58,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-20 17:36:13] 2025-02-20 16:35:59,670 | INFO     | [job] queue monitor thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:36:01,261 | INFO     | [data] queue_monitor thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:36:05,565 [wrapper] supervise_pilot (15 min periods counter: 25)
[2025-02-20 17:36:13] 2025-02-20 16:36:06,172 | INFO     | job.realtimelogging is not enabled
[2025-02-20 17:36:13] 2025-02-20 16:36:07,177 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-20 17:36:13] 2025-02-20 16:36:07,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22642667050816)>', '<ExcThread(monitor, started 22642421606144)>']
[2025-02-20 17:36:13] 2025-02-20 16:36:08,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-20 17:36:13] 2025-02-20 16:36:08,333 | INFO     | [monitor] control thread has ended
[2025-02-20 17:36:13] 2025-02-20 16:36:12,703 | INFO     | all workflow threads have been joined
[2025-02-20 17:36:13] 2025-02-20 16:36:12,703 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-20 17:36:13] 2025-02-20 16:36:12,704 | INFO     | traces error code: 0
[2025-02-20 17:36:13] 2025-02-20 16:36:12,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-20 17:36:13] 2025-02-20 16:36:12,849 [wrapper] ==== pilot stdout END ====
[2025-02-20 17:36:13] 2025-02-20 16:36:12,853 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-20 17:36:13] 2025-02-20 16:36:12,857 [wrapper] pilotpid: 3950288
[2025-02-20 17:36:13] 2025-02-20 16:36:12,861 [wrapper] Pilot exit status: 0
[2025-02-20 17:36:13] 2025-02-20 16:36:12,877 [wrapper] pandaids: 6518838855
[2025-02-20 17:36:13] 2025-02-20 16:36:13,022 [wrapper] cleanup supervisor_pilot 1357548 3950289
[2025-02-20 17:36:13] 2025-02-20 16:36:13,027 [wrapper] Test setup, not cleaning
[2025-02-20 17:36:13] 2025-02-20 16:36:13,035 [wrapper] apfmon messages muted
[2025-02-20 17:36:13] 2025-02-20 16:36:13,039 [wrapper] ==== wrapper stdout END ====
[2025-02-20 17:36:13] 2025-02-20 16:36:13,043 [wrapper] ==== wrapper stderr END ====
[2025-02-20 17:36:13]  *** Error codes and diagnostics ***
[2025-02-20 17:36:13]     "exeErrorCode": 0,
[2025-02-20 17:36:13]     "exeErrorDiag": "",
[2025-02-20 17:36:13]     "pilotErrorCode": 0,
[2025-02-20 17:36:13]     "pilotErrorDiag": "",
[2025-02-20 17:36:13]  *** Listing of results directory ***
[2025-02-20 17:36:13] total 666544
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc    491065 Feb 19 15:57 pilot3.tar.gz
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc      5118 Feb 19 16:07 queuedata.json
[2025-02-20 17:36:13] -rwx------ 1 boinc boinc     35865 Feb 19 16:09 runpilot2-wrapper.sh
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc       100 Feb 20 11:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-20 17:36:13] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 11:35 run_atlas
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc       105 Feb 20 11:35 job.xml
[2025-02-20 17:36:13] -rw-r--r-- 2 boinc boinc 347582298 Feb 20 11:35 EVNT.43092757._001182.pool.root.1
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc      6677 Feb 20 11:35 init_data.xml
[2025-02-20 17:36:13] drwxrwx--x 2 boinc boinc      4096 Feb 20 11:35 shared
[2025-02-20 17:36:13] -rw-r--r-- 2 boinc boinc    503553 Feb 20 11:35 input.tar.gz
[2025-02-20 17:36:13] -rw-r--r-- 2 boinc boinc     17569 Feb 20 11:35 start_atlas.sh
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc         0 Feb 20 11:35 boinc_lockfile
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc      2557 Feb 20 11:35 pandaJob.out
[2025-02-20 17:36:13] -rw------- 1 boinc boinc       424 Feb 20 11:35 setup.sh.local
[2025-02-20 17:36:13] -rw------- 1 boinc boinc    987352 Feb 20 11:36 agis_schedconf.cvmfs.json
[2025-02-20 17:36:13] drwx------ 4 boinc boinc      4096 Feb 20 11:36 pilot3
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc       531 Feb 20 17:34 boinc_task_state.xml
[2025-02-20 17:36:13] -rw------- 1 boinc boinc 325613416 Feb 20 17:34 HITS.43205075._050609.pool.root.1
[2025-02-20 17:36:13] -rw------- 1 boinc boinc        95 Feb 20 17:35 pilot_heartbeat.json
[2025-02-20 17:36:13] -rw------- 1 boinc boinc      1029 Feb 20 17:35 memory_monitor_summary.json
[2025-02-20 17:36:13] -rw------- 1 boinc boinc   1586690 Feb 20 17:35 agis_ddmendpoints.agis.ALL.json
[2025-02-20 17:36:13] -rw------- 1 boinc boinc    426666 Feb 20 17:35 log.43205075._050609.job.log.tgz.1
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc      8192 Feb 20 17:35 boinc_mmap_file
[2025-02-20 17:36:13] -rw------- 1 boinc boinc      7702 Feb 20 17:35 heartbeat.json
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc        28 Feb 20 17:35 wrapper_checkpoint.txt
[2025-02-20 17:36:13] -rw------- 1 boinc boinc      4484 Feb 20 17:36 pilotlog.txt
[2025-02-20 17:36:13] -rw------- 1 boinc boinc   2342899 Feb 20 17:36 log.43205075._050609.job.log.1
[2025-02-20 17:36:13] -rw------- 1 boinc boinc       357 Feb 20 17:36 output.list
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc       620 Feb 20 17:36 runtime_log
[2025-02-20 17:36:13] -rw------- 1 boinc boinc   2785280 Feb 20 17:36 result.tar.gz
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc     11424 Feb 20 17:36 runtime_log.err
[2025-02-20 17:36:13] -rw------- 1 boinc boinc       666 Feb 20 17:36 eD6KDmss046nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmMFoKDmASmafm.diag
[2025-02-20 17:36:13] -rw-r--r-- 1 boinc boinc     21317 Feb 20 17:36 stderr.txt
[2025-02-20 17:36:13] HITS file was successfully produced:
[2025-02-20 17:36:13] -rw------- 1 boinc boinc 325613416 Feb 20 17:34 shared/HITS.pool.root.1
[2025-02-20 17:36:13]  *** Contents of shared directory: ***
[2025-02-20 17:36:13] total 660660
[2025-02-20 17:36:13] -rw-r--r-- 2 boinc boinc 347582298 Feb 20 11:35 ATLAS.root_0
[2025-02-20 17:36:13] -rw-r--r-- 2 boinc boinc    503553 Feb 20 11:35 input.tar.gz
[2025-02-20 17:36:13] -rw-r--r-- 2 boinc boinc     17569 Feb 20 11:35 start_atlas.sh
[2025-02-20 17:36:13] -rw------- 1 boinc boinc 325613416 Feb 20 17:34 HITS.pool.root.1
[2025-02-20 17:36:13] -rw------- 1 boinc boinc   2785280 Feb 20 17:36 result.tar.gz
17:36:14 (3946214): run_atlas exited; CPU time 82527.874022
17:36:14 (3946214): called boinc_finish(0)

</stderr_txt>
]]>

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