Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
12:47:30 (3492828): wrapper (7.7.26015): starting
12:47:30 (3492828): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 12:47:30] Arguments: --nthreads 4
[2025-02-22 12:47:30] Threads: 4
[2025-02-22 12:47:30] Checking for CVMFS
[2025-02-22 12:47:30] No cvmfs_config command found, will try listing directly
[2025-02-22 12:47:30] CVMFS is ok
[2025-02-22 12:47:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 12:47:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 12:47:30] Further information can be found at the LHC@home message board.
[2025-02-22 12:47:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 12:47:30] Checking for apptainer binary...
[2025-02-22 12:47:30] which: no apptainer in ((null))
[2025-02-22 12:47:30] apptainer is not installed, using version from CVMFS
[2025-02-22 12:47:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 12:47:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot4/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-02-22 12:47:30] apptainer works
[2025-02-22 12:47:30] Set ATHENA_PROC_NUMBER=4
[2025-02-22 12:47:30] Set ATHENA_CORE_NUMBER=4
[2025-02-22 12:47:30] Starting ATLAS job with PandaID=6518672604
[2025-02-22 12:47:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot4/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:44:34 (3696798): wrapper (7.7.26015): starting
14:44:34 (3696798): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 14:44:34] Arguments: --nthreads 4
[2025-02-22 14:44:34] Threads: 4
[2025-02-22 14:44:34] This job has been restarted, cleaning up previous attempt
[2025-02-22 14:44:34] Checking for CVMFS
[2025-02-22 14:44:34] No cvmfs_config command found, will try listing directly
[2025-02-22 14:44:34] CVMFS is ok
[2025-02-22 14:44:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 14:44:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 14:44:34] Further information can be found at the LHC@home message board.
[2025-02-22 14:44:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 14:44:34] Checking for apptainer binary...
[2025-02-22 14:44:34] which: no apptainer in ((null))
[2025-02-22 14:44:34] apptainer is not installed, using version from CVMFS
[2025-02-22 14:44:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 14:44:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot4/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-02-22 14:44:34] apptainer works
[2025-02-22 14:44:34] Set ATHENA_PROC_NUMBER=4
[2025-02-22 14:44:34] Set ATHENA_CORE_NUMBER=4
[2025-02-22 14:44:34] Starting ATLAS job with PandaID=6518672604
[2025-02-22 14:44:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot4/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 14:47:42] Job failed
[2025-02-22 14:47:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot4/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-02-22 14:47:42] ++ pwd
[2025-02-22 14:47:42] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot4/slots/0/
[2025-02-22 14:47:42] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot4/slots/0/
[2025-02-22 14:47:42] + mv ATLAS.root_0 EVNT.43078917._002156.pool.root.1
[2025-02-22 14:47:42] mv: 'ATLAS.root_0' and 'EVNT.43078917._002156.pool.root.1' are the same file
[2025-02-22 14:47:42] + tar --strip-components=5 -xvf input.tar.gz
[2025-02-22 14:47:42] + umask 077
[2025-02-22 14:47:42] ++ date +%s
[2025-02-22 14:47:42] + ACCOUNTING_STARTTIME=1740231874
[2025-02-22 14:47:42] + echo 'Detecting resource accounting method available for the job.'
[2025-02-22 14:47:42] Detecting resource accounting method available for the job.
[2025-02-22 14:47:42] + JOB_ACCOUNTING=
[2025-02-22 14:47:42] + command -v arc-job-cgroup
[2025-02-22 14:47:42] + '[' -z '' ']'
[2025-02-22 14:47:42] + GNU_TIME=/usr/bin/time
[2025-02-22 14:47:42] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-02-22 14:47:42] Looking for /usr/bin/time tool for accounting measurements
[2025-02-22 14:47:42] + '[' '!' -z /usr/bin/time ']'
[2025-02-22 14:47:42] + /usr/bin/time --version
[2025-02-22 14:47:42] + echo 'GNU time found and will be used for job accounting.'
[2025-02-22 14:47:42] GNU time found and will be used for job accounting.
[2025-02-22 14:47:42] + JOB_ACCOUNTING=gnutime
[2025-02-22 14:47:42] + '[' -z gnutime ']'
[2025-02-22 14:47:42] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-22 14:47:42] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-22 14:47:42] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-19/BOINC_MCORE/6518672604.out
[2025-02-22 14:47:42] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-19/BOINC_MCORE/6518672604.out
[2025-02-22 14:47:42] + export PILOT_NOKILL=YES
[2025-02-22 14:47:42] + PILOT_NOKILL=YES
[2025-02-22 14:47:42] + export GRID_GLOBAL_JOBID=nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-22 14:47:42] + GRID_GLOBAL_JOBID=nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-22 14:47:42] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-22 14:47:42] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-22 14:47:42] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-22 14:47:42] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-22 14:47:42] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-02-22 14:47:42] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-02-22 14:47:42] ++ pwd
[2025-02-22 14:47:42] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot4/slots/0
[2025-02-22 14:47:42] + RUNTIME_JOB_STDIN=/dev/null
[2025-02-22 14:47:42] ++ pwd
[2025-02-22 14:47:42] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot4/slots/0/log.43078919._075478.job.log.1
[2025-02-22 14:47:42] ++ pwd
[2025-02-22 14:47:42] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot4/slots/0/log.43078919._075478.job.log.1
[2025-02-22 14:47:42] ++ pwd
[2025-02-22 14:47:42] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot4/slots/0.diag
[2025-02-22 14:47:42] + '[' '!' -z '' ']'
[2025-02-22 14:47:42] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-02-22 14:47:42] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-02-22 14:47:42] + RUNTIME_FRONTEND_SEES_NODE=
[2025-02-22 14:47:42] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-02-22 14:47:42] + '[' '!' -z '' ']'
[2025-02-22 14:47:42] + '[' -z yes ']'
[2025-02-22 14:47:42] ++ pwd
[2025-02-22 14:47:42] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag
[2025-02-22 14:47:42] + runtimeenvironments=
[2025-02-22 14:47:42] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-22 14:47:42] + RTE_function_0 1
[2025-02-22 14:47:42] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-22 14:47:42] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-22 14:47:42] + export BOINC_APP=ATLAS
[2025-02-22 14:47:42] + BOINC_APP=ATLAS
[2025-02-22 14:47:42] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-22 14:47:42] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-22 14:47:42] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-22 14:47:42] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-22 14:47:42] + '[' -z 1 ']'
[2025-02-22 14:47:42] + '[' 1 == 1 ']'
[2025-02-22 14:47:42] + shift
[2025-02-22 14:47:42] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2025-02-22 14:47:42] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-22 14:47:42] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2025-02-22 14:47:42] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot4/slots/0/
[2025-02-22 14:47:42] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot4/slots/0/
[2025-02-22 14:47:42] + '[' -e /scratch/boinc/var/slot4/slots/0/init_data.xml ']'
[2025-02-22 14:47:42] + grep '<use_http_proxy/>' /scratch/boinc/var/slot4/slots/0/init_data.xml
[2025-02-22 14:47:42] + '[' -e /scratch/boinc/var/slot4/slots/0/init_data.xml ']'
[2025-02-22 14:47:42] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot4/slots/0/init_data.xml
[2025-02-22 14:47:42] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2025-02-22 14:47:42] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-22 14:47:42] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2025-02-22 14:47:42] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-22 14:47:42] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-22 14:47:42] + '[' 0 -ne 0 ']'
[2025-02-22 14:47:42] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-02-22 14:47:42] + '[' -f /etc/os-release ']'
[2025-02-22 14:47:42] +++ cat /etc/os-release
[2025-02-22 14:47:42] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-02-22 14:47:42] +++ NAME='CentOS Linux'
[2025-02-22 14:47:42] +++ VERSION='7 (Core)'
[2025-02-22 14:47:42] +++ ID=centos
[2025-02-22 14:47:42] +++ ID_LIKE='rhel fedora'
[2025-02-22 14:47:42] +++ VERSION_ID=7
[2025-02-22 14:47:42] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-02-22 14:47:42] +++ ANSI_COLOR='0;31'
[2025-02-22 14:47:42] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-02-22 14:47:42] +++ HOME_URL=https://www.centos.org/
[2025-02-22 14:47:42] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-02-22 14:47:42] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-02-22 14:47:42] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-02-22 14:47:42] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-02-22 14:47:42] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-02-22 14:47:42] ++ echo 'CentOS Linux 7 (Core)'
[2025-02-22 14:47:42] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-02-22 14:47:42] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-02-22 14:47:42] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-02-22 14:47:42] + HOME=/scratch/boinc/var/slot4/slots/0
[2025-02-22 14:47:42] + export HOME
[2025-02-22 14:47:42] + cd /scratch/boinc/var/slot4/slots/0
[2025-02-22 14:47:42] + '[' '!' -z '' ']'
[2025-02-22 14:47:42] + '[' -z '' ']'
[2025-02-22 14:47:42] ++ /bin/hostname -f
[2025-02-22 14:47:42] + nodename=skurut07.grid.cesnet.cz
[2025-02-22 14:47:42] + echo nodename=skurut07.grid.cesnet.cz
[2025-02-22 14:47:42] + echo Processors=2
[2025-02-22 14:47:42] + echo Nodecount=1
[2025-02-22 14:47:42] + echo Benchmark=HEPSPEC:1.0
[2025-02-22 14:47:42] + executable=./runpilot2-wrapper.sh
[2025-02-22 14:47:42] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-02-22 14:47:42] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-02-22 14:47:42] ++ head -n 1
[2025-02-22 14:47:42] ++ tr -d '\0'
[2025-02-22 14:47:42] + line1='#!/bin/bash'
[2025-02-22 14:47:42] ++ echo '#!/bin/bash'
[2025-02-22 14:47:42] ++ sed -n 's/^#! *//p'
[2025-02-22 14:47:42] + shebang=/bin/bash
[2025-02-22 14:47:42] ++ echo /bin/bash
[2025-02-22 14:47:42] ++ awk '{print $1}'
[2025-02-22 14:47:42] + interpreter=/bin/bash
[2025-02-22 14:47:42] + '[' /bin/bash = /usr/bin/env ']'
[2025-02-22 14:47:42] + '[' x/bin/bash = x ']'
[2025-02-22 14:47:42] + type /bin/bash
[2025-02-22 14:47:42] + '[' xgnutime = xgnutime ']'
[2025-02-22 14:47:42] + /usr/bin/time -o /scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.9.4.15 -z -t --piloturl local --mute --container
[2025-02-22 14:47:42] + RESULT=1
[2025-02-22 14:47:42] + sed -i -e /nodename=/d /scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag
[2025-02-22 14:47:42] ++ grep domain_name init_data.xml
[2025-02-22 14:47:42] ++ awk -F '<' '{print $1}'
[2025-02-22 14:47:42] ++ sed -e 's# #_#g'
[2025-02-22 14:47:42] ++ awk -F '>' '{print $2}'
[2025-02-22 14:47:42] + hostname=skurut07.grid.cesnet.cz
[2025-02-22 14:47:42] ++ grep user_name init_data.xml
[2025-02-22 14:47:42] ++ awk -F '>' '{print $2}'
[2025-02-22 14:47:42] ++ awk -F '<' '{print $1}'
[2025-02-22 14:47:42] ++ sed -e 's# #_#g'
[2025-02-22 14:47:42] + username=praguelcg2
[2025-02-22 14:47:42] + nodename=praguelcg2@skurut07.grid.cesnet.cz
[2025-02-22 14:47:42] + echo nodename=praguelcg2@skurut07.grid.cesnet.cz
[2025-02-22 14:47:42] + '[' -n 4 ']'
[2025-02-22 14:47:42] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag
[2025-02-22 14:47:42] + echo exitcode=1
[2025-02-22 14:47:42] + runtimeenvironments=
[2025-02-22 14:47:42] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-22 14:47:42] + RTE_function_0 2
[2025-02-22 14:47:42] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-22 14:47:42] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-22 14:47:42] + export BOINC_APP=ATLAS
[2025-02-22 14:47:42] + BOINC_APP=ATLAS
[2025-02-22 14:47:42] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-22 14:47:42] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-22 14:47:42] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-22 14:47:42] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-22 14:47:42] + '[' -z 2 ']'
[2025-02-22 14:47:42] + '[' 2 == 1 ']'
[2025-02-22 14:47:42] + '[' 0 -ne 0 ']'
[2025-02-22 14:47:42] + echo 'zip all output files'
[2025-02-22 14:47:42] + flist='*.diag '
[2025-02-22 14:47:42] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-22 14:47:42] + '[' -e ./heartbeat.json ']'
[2025-02-22 14:47:42] + flist='*.diag  ./heartbeat.json'
[2025-02-22 14:47:42] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-22 14:47:42] + '[' -e ./output.list ']'
[2025-02-22 14:47:42] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-22 14:47:42] + '[' -e ./log.43078919._075478.job.log.1 ']'
[2025-02-22 14:47:42] + flist='*.diag  ./heartbeat.json ./log.43078919._075478.job.log.1'
[2025-02-22 14:47:42] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-22 14:47:42] + '[' -e ./log.43078919._075478.job.log.1 ']'
[2025-02-22 14:47:42] + flist='*.diag  ./heartbeat.json ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1'
[2025-02-22 14:47:42] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-22 14:47:42] + '[' -e ./gmlog/ ']'
[2025-02-22 14:47:42] + '[' -f output.list ']'
[2025-02-22 14:47:42] + tar cvf result.tar.gz nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag ./heartbeat.json ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1
[2025-02-22 14:47:42] + '[' xgnutime = xcgroup ']'
[2025-02-22 14:47:42] + '[' -n '' ']'
[2025-02-22 14:47:42] + '[' -n '' ']'
[2025-02-22 14:47:42] ++ date +%s
[2025-02-22 14:47:42] + ACCOUNTING_ENDTIME=1740232062
[2025-02-22 14:47:42] ++ date -d '1970-01-01 UTC 1740231874 seconds' +%Y%m%d%H%M%SZ
[2025-02-22 14:47:42] + echo LRMSStartTime=20250222144434Z
[2025-02-22 14:47:42] ++ date -d '1970-01-01 UTC 1740232062 seconds' +%Y%m%d%H%M%SZ
[2025-02-22 14:47:42] + echo LRMSEndTime=20250222144742Z
[2025-02-22 14:47:42] + echo walltime=188
[2025-02-22 14:47:42] + echo exitcode=1
[2025-02-22 14:47:42] + exit 1
[2025-02-22 14:47:42] ./PanDA_Pilot-6518672604/log.EVNTtoHITS
[2025-02-22 14:47:42] ./PanDA_Pilot-6518672604/PoolFileCatalog.xml
[2025-02-22 14:47:42] ./PanDA_Pilot-6518672604/prmon.log
[2025-02-22 14:47:42] ./PanDA_Pilot-6518672604/pilotlog.txt
[2025-02-22 14:47:42] ./runtime_log.err
[2025-02-22 14:47:42] ./log.43078919._075478.job.log.1
[2025-02-22 14:47:42] ./runtime_log
[2025-02-22 14:47:42] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-02-22 14:47:42] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-02-22 14:47:42] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-02-22 14:47:42] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-02-22 14:47:42] ./pilot3/pilot/util/loggingsupport.py
[2025-02-22 14:47:42] ./pilot3/pilot/util/realtimelogger.py
[2025-02-22 14:47:42] ./pilotlog.txt
17:05:45 (4168162): wrapper (7.7.26015): starting
17:05:45 (4168162): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 17:05:45] Arguments: --nthreads 4
[2025-02-22 17:05:45] Threads: 4
[2025-02-22 17:05:45] This job has been restarted, cleaning up previous attempt
[2025-02-22 17:05:45] Checking for CVMFS
[2025-02-22 17:05:45] No cvmfs_config command found, will try listing directly
[2025-02-22 17:05:45] CVMFS is ok
[2025-02-22 17:05:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 17:05:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 17:05:45] Further information can be found at the LHC@home message board.
[2025-02-22 17:05:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 17:05:45] Checking for apptainer binary...
[2025-02-22 17:05:45] which: no apptainer in ((null))
[2025-02-22 17:05:45] apptainer is not installed, using version from CVMFS
[2025-02-22 17:05:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 17:05:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot4/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-02-22 17:05:45] apptainer works
[2025-02-22 17:05:45] Set ATHENA_PROC_NUMBER=4
[2025-02-22 17:05:45] Set ATHENA_CORE_NUMBER=4
[2025-02-22 17:05:45] Starting ATLAS job with PandaID=6518672604
[2025-02-22 17:05:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot4/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 17:08:53] Job failed
[2025-02-22 17:08:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot4/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-02-22 17:08:53] ++ pwd
[2025-02-22 17:08:53] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot4/slots/0/
[2025-02-22 17:08:53] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot4/slots/0/
[2025-02-22 17:08:53] + mv ATLAS.root_0 EVNT.43078917._002156.pool.root.1
[2025-02-22 17:08:53] mv: 'ATLAS.root_0' and 'EVNT.43078917._002156.pool.root.1' are the same file
[2025-02-22 17:08:53] + tar --strip-components=5 -xvf input.tar.gz
[2025-02-22 17:08:53] + umask 077
[2025-02-22 17:08:53] ++ date +%s
[2025-02-22 17:08:53] + ACCOUNTING_STARTTIME=1740240345
[2025-02-22 17:08:53] + echo 'Detecting resource accounting method available for the job.'
[2025-02-22 17:08:53] Detecting resource accounting method available for the job.
[2025-02-22 17:08:53] + JOB_ACCOUNTING=
[2025-02-22 17:08:53] + command -v arc-job-cgroup
[2025-02-22 17:08:53] + '[' -z '' ']'
[2025-02-22 17:08:53] + GNU_TIME=/usr/bin/time
[2025-02-22 17:08:53] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-02-22 17:08:53] Looking for /usr/bin/time tool for accounting measurements
[2025-02-22 17:08:53] + '[' '!' -z /usr/bin/time ']'
[2025-02-22 17:08:53] + /usr/bin/time --version
[2025-02-22 17:08:53] + echo 'GNU time found and will be used for job accounting.'
[2025-02-22 17:08:53] GNU time found and will be used for job accounting.
[2025-02-22 17:08:53] + JOB_ACCOUNTING=gnutime
[2025-02-22 17:08:53] + '[' -z gnutime ']'
[2025-02-22 17:08:53] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-22 17:08:53] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-22 17:08:53] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-19/BOINC_MCORE/6518672604.out
[2025-02-22 17:08:53] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-19/BOINC_MCORE/6518672604.out
[2025-02-22 17:08:53] + export PILOT_NOKILL=YES
[2025-02-22 17:08:53] + PILOT_NOKILL=YES
[2025-02-22 17:08:53] + export GRID_GLOBAL_JOBID=nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-22 17:08:53] + GRID_GLOBAL_JOBID=nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-22 17:08:53] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-22 17:08:53] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-22 17:08:53] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-22 17:08:53] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-22 17:08:53] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-02-22 17:08:53] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-02-22 17:08:53] ++ pwd
[2025-02-22 17:08:53] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot4/slots/0
[2025-02-22 17:08:53] + RUNTIME_JOB_STDIN=/dev/null
[2025-02-22 17:08:53] ++ pwd
[2025-02-22 17:08:53] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot4/slots/0/log.43078919._075478.job.log.1
[2025-02-22 17:08:53] ++ pwd
[2025-02-22 17:08:53] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot4/slots/0/log.43078919._075478.job.log.1
[2025-02-22 17:08:53] ++ pwd
[2025-02-22 17:08:53] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot4/slots/0.diag
[2025-02-22 17:08:53] + '[' '!' -z '' ']'
[2025-02-22 17:08:53] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-02-22 17:08:53] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-02-22 17:08:53] + RUNTIME_FRONTEND_SEES_NODE=
[2025-02-22 17:08:53] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-02-22 17:08:53] + '[' '!' -z '' ']'
[2025-02-22 17:08:53] + '[' -z yes ']'
[2025-02-22 17:08:53] ++ pwd
[2025-02-22 17:08:53] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag
[2025-02-22 17:08:53] + runtimeenvironments=
[2025-02-22 17:08:53] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-22 17:08:53] + RTE_function_0 1
[2025-02-22 17:08:53] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-22 17:08:53] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-22 17:08:53] + export BOINC_APP=ATLAS
[2025-02-22 17:08:53] + BOINC_APP=ATLAS
[2025-02-22 17:08:53] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-22 17:08:53] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-22 17:08:53] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-22 17:08:53] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-22 17:08:53] + '[' -z 1 ']'
[2025-02-22 17:08:53] + '[' 1 == 1 ']'
[2025-02-22 17:08:53] + shift
[2025-02-22 17:08:53] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2025-02-22 17:08:53] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-22 17:08:53] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2025-02-22 17:08:53] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot4/slots/0/
[2025-02-22 17:08:53] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot4/slots/0/
[2025-02-22 17:08:53] + '[' -e /scratch/boinc/var/slot4/slots/0/init_data.xml ']'
[2025-02-22 17:08:53] + grep '<use_http_proxy/>' /scratch/boinc/var/slot4/slots/0/init_data.xml
[2025-02-22 17:08:53] + '[' -e /scratch/boinc/var/slot4/slots/0/init_data.xml ']'
[2025-02-22 17:08:53] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot4/slots/0/init_data.xml
[2025-02-22 17:08:53] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2025-02-22 17:08:53] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-22 17:08:53] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2025-02-22 17:08:53] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-22 17:08:53] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-22 17:08:53] + '[' 0 -ne 0 ']'
[2025-02-22 17:08:53] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-02-22 17:08:53] + '[' -f /etc/os-release ']'
[2025-02-22 17:08:53] +++ cat /etc/os-release
[2025-02-22 17:08:53] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-02-22 17:08:53] +++ NAME='CentOS Linux'
[2025-02-22 17:08:53] +++ VERSION='7 (Core)'
[2025-02-22 17:08:53] +++ ID=centos
[2025-02-22 17:08:53] +++ ID_LIKE='rhel fedora'
[2025-02-22 17:08:53] +++ VERSION_ID=7
[2025-02-22 17:08:53] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-02-22 17:08:53] +++ ANSI_COLOR='0;31'
[2025-02-22 17:08:53] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-02-22 17:08:53] +++ HOME_URL=https://www.centos.org/
[2025-02-22 17:08:53] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-02-22 17:08:53] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-02-22 17:08:53] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-02-22 17:08:53] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-02-22 17:08:53] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-02-22 17:08:53] ++ echo 'CentOS Linux 7 (Core)'
[2025-02-22 17:08:53] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-02-22 17:08:53] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-02-22 17:08:53] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-02-22 17:08:53] + HOME=/scratch/boinc/var/slot4/slots/0
[2025-02-22 17:08:53] + export HOME
[2025-02-22 17:08:53] + cd /scratch/boinc/var/slot4/slots/0
[2025-02-22 17:08:53] + '[' '!' -z '' ']'
[2025-02-22 17:08:53] + '[' -z '' ']'
[2025-02-22 17:08:53] ++ /bin/hostname -f
[2025-02-22 17:08:53] + nodename=skurut07.grid.cesnet.cz
[2025-02-22 17:08:53] + echo nodename=skurut07.grid.cesnet.cz
[2025-02-22 17:08:53] + echo Processors=2
[2025-02-22 17:08:53] + echo Nodecount=1
[2025-02-22 17:08:53] + echo Benchmark=HEPSPEC:1.0
[2025-02-22 17:08:53] + executable=./runpilot2-wrapper.sh
[2025-02-22 17:08:53] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-02-22 17:08:53] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-02-22 17:08:53] ++ head -n 1
[2025-02-22 17:08:53] ++ tr -d '\0'
[2025-02-22 17:08:53] + line1='#!/bin/bash'
[2025-02-22 17:08:53] ++ echo '#!/bin/bash'
[2025-02-22 17:08:53] ++ sed -n 's/^#! *//p'
[2025-02-22 17:08:53] + shebang=/bin/bash
[2025-02-22 17:08:53] ++ echo /bin/bash
[2025-02-22 17:08:53] ++ awk '{print $1}'
[2025-02-22 17:08:53] + interpreter=/bin/bash
[2025-02-22 17:08:53] + '[' /bin/bash = /usr/bin/env ']'
[2025-02-22 17:08:53] + '[' x/bin/bash = x ']'
[2025-02-22 17:08:53] + type /bin/bash
[2025-02-22 17:08:53] + '[' xgnutime = xgnutime ']'
[2025-02-22 17:08:53] + /usr/bin/time -o /scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.9.4.15 -z -t --piloturl local --mute --container
[2025-02-22 17:08:53] + RESULT=1
[2025-02-22 17:08:53] + sed -i -e /nodename=/d /scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag
[2025-02-22 17:08:53] ++ grep domain_name init_data.xml
[2025-02-22 17:08:53] ++ awk -F '>' '{print $2}'
[2025-02-22 17:08:53] ++ awk -F '<' '{print $1}'
[2025-02-22 17:08:53] ++ sed -e 's# #_#g'
[2025-02-22 17:08:53] + hostname=skurut07.grid.cesnet.cz
[2025-02-22 17:08:53] ++ grep user_name init_data.xml
[2025-02-22 17:08:53] ++ awk -F '>' '{print $2}'
[2025-02-22 17:08:53] ++ awk -F '<' '{print $1}'
[2025-02-22 17:08:53] ++ sed -e 's# #_#g'
[2025-02-22 17:08:53] + username=praguelcg2
[2025-02-22 17:08:53] + nodename=praguelcg2@skurut07.grid.cesnet.cz
[2025-02-22 17:08:53] + echo nodename=praguelcg2@skurut07.grid.cesnet.cz
[2025-02-22 17:08:53] + '[' -n 4 ']'
[2025-02-22 17:08:53] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag
[2025-02-22 17:08:53] + echo exitcode=1
[2025-02-22 17:08:53] + runtimeenvironments=
[2025-02-22 17:08:53] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-22 17:08:53] + RTE_function_0 2
[2025-02-22 17:08:53] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-22 17:08:53] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-22 17:08:53] + export BOINC_APP=ATLAS
[2025-02-22 17:08:53] + BOINC_APP=ATLAS
[2025-02-22 17:08:53] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-22 17:08:53] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-22 17:08:53] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-22 17:08:53] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-22 17:08:53] + '[' -z 2 ']'
[2025-02-22 17:08:53] + '[' 2 == 1 ']'
[2025-02-22 17:08:53] + '[' 0 -ne 0 ']'
[2025-02-22 17:08:53] + echo 'zip all output files'
[2025-02-22 17:08:53] + flist='*.diag '
[2025-02-22 17:08:53] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-22 17:08:53] + '[' -e ./heartbeat.json ']'
[2025-02-22 17:08:53] + flist='*.diag  ./heartbeat.json'
[2025-02-22 17:08:53] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-22 17:08:53] + '[' -e ./output.list ']'
[2025-02-22 17:08:53] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-22 17:08:53] + '[' -e ./log.43078919._075478.job.log.1 ']'
[2025-02-22 17:08:53] + flist='*.diag  ./heartbeat.json ./log.43078919._075478.job.log.1'
[2025-02-22 17:08:53] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-22 17:08:53] + '[' -e ./log.43078919._075478.job.log.1 ']'
[2025-02-22 17:08:53] + flist='*.diag  ./heartbeat.json ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1'
[2025-02-22 17:08:53] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-22 17:08:53] + '[' -e ./gmlog/ ']'
[2025-02-22 17:08:53] + '[' -f output.list ']'
[2025-02-22 17:08:53] + tar cvf result.tar.gz nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag ./heartbeat.json ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1
[2025-02-22 17:08:53] + '[' xgnutime = xcgroup ']'
[2025-02-22 17:08:53] + '[' -n '' ']'
[2025-02-22 17:08:53] + '[' -n '' ']'
[2025-02-22 17:08:53] ++ date +%s
[2025-02-22 17:08:53] + ACCOUNTING_ENDTIME=1740240533
[2025-02-22 17:08:53] ++ date -d '1970-01-01 UTC 1740240345 seconds' +%Y%m%d%H%M%SZ
[2025-02-22 17:08:53] + echo LRMSStartTime=20250222170545Z
[2025-02-22 17:08:53] ++ date -d '1970-01-01 UTC 1740240533 seconds' +%Y%m%d%H%M%SZ
[2025-02-22 17:08:53] + echo LRMSEndTime=20250222170853Z
[2025-02-22 17:08:53] + echo walltime=188
[2025-02-22 17:08:53] + echo exitcode=1
[2025-02-22 17:08:53] + exit 1
[2025-02-22 17:08:53] ./PanDA_Pilot-6518672604/log.EVNTtoHITS
[2025-02-22 17:08:53] ./PanDA_Pilot-6518672604/PoolFileCatalog.xml
[2025-02-22 17:08:53] ./PanDA_Pilot-6518672604/prmon.log
[2025-02-22 17:08:53] ./PanDA_Pilot-6518672604/pilotlog.txt
[2025-02-22 17:08:53] ./runtime_log.err
[2025-02-22 17:08:53] ./log.43078919._075478.job.log.1
[2025-02-22 17:08:53] ./runtime_log
[2025-02-22 17:08:53] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-02-22 17:08:53] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-02-22 17:08:53] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-02-22 17:08:53] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-02-22 17:08:53] ./pilot3/pilot/util/loggingsupport.py
[2025-02-22 17:08:53] ./pilot3/pilot/util/realtimelogger.py
[2025-02-22 17:08:53] ./pilotlog.txt
21:29:57 (525519): wrapper (7.7.26015): starting
21:29:57 (525519): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 21:29:57] Arguments: --nthreads 4
[2025-02-22 21:29:57] Threads: 4
[2025-02-22 21:29:57] This job has been restarted, cleaning up previous attempt
[2025-02-22 21:29:57] Checking for CVMFS
[2025-02-22 21:29:57] No cvmfs_config command found, will try listing directly
[2025-02-22 21:29:57] CVMFS is ok
[2025-02-22 21:29:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 21:29:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 21:29:57] Further information can be found at the LHC@home message board.
[2025-02-22 21:29:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 21:29:57] Checking for apptainer binary...
[2025-02-22 21:29:57] which: no apptainer in ((null))
[2025-02-22 21:29:57] apptainer is not installed, using version from CVMFS
[2025-02-22 21:29:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 21:29:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot4/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-02-22 21:29:57] apptainer works
[2025-02-22 21:29:58] Set ATHENA_PROC_NUMBER=4
[2025-02-22 21:29:58] Set ATHENA_CORE_NUMBER=4
[2025-02-22 21:29:58] Starting ATLAS job with PandaID=6518672604
[2025-02-22 21:29:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot4/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:26:05 (1919098): wrapper (7.7.26015): starting
09:26:05 (1919098): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 09:26:05] Arguments: --nthreads 4
[2025-02-23 09:26:05] Threads: 4
[2025-02-23 09:26:05] This job has been restarted, cleaning up previous attempt
[2025-02-23 09:26:05] Checking for CVMFS
[2025-02-23 09:26:05] No cvmfs_config command found, will try listing directly
[2025-02-23 09:26:05] CVMFS is ok
[2025-02-23 09:26:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 09:26:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 09:26:05] Further information can be found at the LHC@home message board.
[2025-02-23 09:26:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 09:26:05] Checking for apptainer binary...
[2025-02-23 09:26:05] which: no apptainer in ((null))
[2025-02-23 09:26:05] apptainer is not installed, using version from CVMFS
[2025-02-23 09:26:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 09:26:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot4/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-02-23 09:26:05] apptainer works
[2025-02-23 09:26:05] Set ATHENA_PROC_NUMBER=4
[2025-02-23 09:26:05] Set ATHENA_CORE_NUMBER=4
[2025-02-23 09:26:05] Starting ATLAS job with PandaID=6518672604
[2025-02-23 09:26:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot4/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 09:41:19] Job failed
[2025-02-23 09:41:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot4/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-02-23 09:41:19] ++ pwd
[2025-02-23 09:41:19] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot4/slots/0/
[2025-02-23 09:41:19] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot4/slots/0/
[2025-02-23 09:41:19] + mv ATLAS.root_0 EVNT.43078917._002156.pool.root.1
[2025-02-23 09:41:19] mv: 'ATLAS.root_0' and 'EVNT.43078917._002156.pool.root.1' are the same file
[2025-02-23 09:41:19] + tar --strip-components=5 -xvf input.tar.gz
[2025-02-23 09:41:19] + umask 077
[2025-02-23 09:41:19] ++ date +%s
[2025-02-23 09:41:19] + ACCOUNTING_STARTTIME=1740299165
[2025-02-23 09:41:19] + echo 'Detecting resource accounting method available for the job.'
[2025-02-23 09:41:19] Detecting resource accounting method available for the job.
[2025-02-23 09:41:19] + JOB_ACCOUNTING=
[2025-02-23 09:41:19] + command -v arc-job-cgroup
[2025-02-23 09:41:19] + '[' -z '' ']'
[2025-02-23 09:41:19] + GNU_TIME=/usr/bin/time
[2025-02-23 09:41:19] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-02-23 09:41:19] Looking for /usr/bin/time tool for accounting measurements
[2025-02-23 09:41:19] + '[' '!' -z /usr/bin/time ']'
[2025-02-23 09:41:19] + /usr/bin/time --version
[2025-02-23 09:41:19] + echo 'GNU time found and will be used for job accounting.'
[2025-02-23 09:41:19] GNU time found and will be used for job accounting.
[2025-02-23 09:41:19] + JOB_ACCOUNTING=gnutime
[2025-02-23 09:41:19] + '[' -z gnutime ']'
[2025-02-23 09:41:19] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-23 09:41:19] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-02-23 09:41:19] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-19/BOINC_MCORE/6518672604.out
[2025-02-23 09:41:19] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-02-19/BOINC_MCORE/6518672604.out
[2025-02-23 09:41:19] + export PILOT_NOKILL=YES
[2025-02-23 09:41:19] + PILOT_NOKILL=YES
[2025-02-23 09:41:19] + export GRID_GLOBAL_JOBID=nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-23 09:41:19] + GRID_GLOBAL_JOBID=nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-23 09:41:19] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-23 09:41:19] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum
[2025-02-23 09:41:19] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-23 09:41:19] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-02-23 09:41:19] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-02-23 09:41:19] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-02-23 09:41:19] ++ pwd
[2025-02-23 09:41:19] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot4/slots/0
[2025-02-23 09:41:19] + RUNTIME_JOB_STDIN=/dev/null
[2025-02-23 09:41:19] ++ pwd
[2025-02-23 09:41:19] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot4/slots/0/log.43078919._075478.job.log.1
[2025-02-23 09:41:19] ++ pwd
[2025-02-23 09:41:19] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot4/slots/0/log.43078919._075478.job.log.1
[2025-02-23 09:41:19] ++ pwd
[2025-02-23 09:41:19] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot4/slots/0.diag
[2025-02-23 09:41:19] + '[' '!' -z '' ']'
[2025-02-23 09:41:19] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-02-23 09:41:19] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-02-23 09:41:19] + RUNTIME_FRONTEND_SEES_NODE=
[2025-02-23 09:41:19] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-02-23 09:41:19] + '[' '!' -z '' ']'
[2025-02-23 09:41:19] + '[' -z yes ']'
[2025-02-23 09:41:19] ++ pwd
[2025-02-23 09:41:19] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag
[2025-02-23 09:41:19] + runtimeenvironments=
[2025-02-23 09:41:19] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-23 09:41:19] + RTE_function_0 1
[2025-02-23 09:41:19] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-23 09:41:19] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-23 09:41:19] + export BOINC_APP=ATLAS
[2025-02-23 09:41:19] + BOINC_APP=ATLAS
[2025-02-23 09:41:19] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-23 09:41:19] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-23 09:41:19] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-23 09:41:19] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-23 09:41:19] + '[' -z 1 ']'
[2025-02-23 09:41:19] + '[' 1 == 1 ']'
[2025-02-23 09:41:19] + shift
[2025-02-23 09:41:19] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2025-02-23 09:41:19] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-23 09:41:19] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2025-02-23 09:41:19] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot4/slots/0/
[2025-02-23 09:41:19] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot4/slots/0/
[2025-02-23 09:41:19] + '[' -e /scratch/boinc/var/slot4/slots/0/init_data.xml ']'
[2025-02-23 09:41:19] + grep '<use_http_proxy/>' /scratch/boinc/var/slot4/slots/0/init_data.xml
[2025-02-23 09:41:19] + '[' -e /scratch/boinc/var/slot4/slots/0/init_data.xml ']'
[2025-02-23 09:41:19] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot4/slots/0/init_data.xml
[2025-02-23 09:41:19] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2025-02-23 09:41:19] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-23 09:41:19] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2025-02-23 09:41:19] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-23 09:41:19] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2025-02-23 09:41:19] + '[' 0 -ne 0 ']'
[2025-02-23 09:41:19] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-02-23 09:41:19] + '[' -f /etc/os-release ']'
[2025-02-23 09:41:19] +++ cat /etc/os-release
[2025-02-23 09:41:19] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-02-23 09:41:19] +++ NAME='CentOS Linux'
[2025-02-23 09:41:19] +++ VERSION='7 (Core)'
[2025-02-23 09:41:19] +++ ID=centos
[2025-02-23 09:41:19] +++ ID_LIKE='rhel fedora'
[2025-02-23 09:41:19] +++ VERSION_ID=7
[2025-02-23 09:41:19] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-02-23 09:41:19] +++ ANSI_COLOR='0;31'
[2025-02-23 09:41:19] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-02-23 09:41:19] +++ HOME_URL=https://www.centos.org/
[2025-02-23 09:41:19] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-02-23 09:41:19] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-02-23 09:41:19] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-02-23 09:41:19] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-02-23 09:41:19] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-02-23 09:41:19] ++ echo 'CentOS Linux 7 (Core)'
[2025-02-23 09:41:19] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-02-23 09:41:19] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-02-23 09:41:19] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-02-23 09:41:19] + HOME=/scratch/boinc/var/slot4/slots/0
[2025-02-23 09:41:19] + export HOME
[2025-02-23 09:41:19] + cd /scratch/boinc/var/slot4/slots/0
[2025-02-23 09:41:19] + '[' '!' -z '' ']'
[2025-02-23 09:41:19] + '[' -z '' ']'
[2025-02-23 09:41:19] ++ /bin/hostname -f
[2025-02-23 09:41:19] + nodename=skurut07.grid.cesnet.cz
[2025-02-23 09:41:19] + echo nodename=skurut07.grid.cesnet.cz
[2025-02-23 09:41:19] + echo Processors=2
[2025-02-23 09:41:19] + echo Nodecount=1
[2025-02-23 09:41:19] + echo Benchmark=HEPSPEC:1.0
[2025-02-23 09:41:19] + executable=./runpilot2-wrapper.sh
[2025-02-23 09:41:19] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-02-23 09:41:19] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-02-23 09:41:19] ++ head -n 1
[2025-02-23 09:41:19] ++ tr -d '\0'
[2025-02-23 09:41:19] + line1='#!/bin/bash'
[2025-02-23 09:41:19] ++ echo '#!/bin/bash'
[2025-02-23 09:41:19] ++ sed -n 's/^#! *//p'
[2025-02-23 09:41:19] + shebang=/bin/bash
[2025-02-23 09:41:19] ++ echo /bin/bash
[2025-02-23 09:41:19] ++ awk '{print $1}'
[2025-02-23 09:41:19] + interpreter=/bin/bash
[2025-02-23 09:41:19] + '[' /bin/bash = /usr/bin/env ']'
[2025-02-23 09:41:19] + '[' x/bin/bash = x ']'
[2025-02-23 09:41:19] + type /bin/bash
[2025-02-23 09:41:19] + '[' xgnutime = xgnutime ']'
[2025-02-23 09:41:19] + /usr/bin/time -o /scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.9.4.15 -z -t --piloturl local --mute --container
[2025-02-23 09:41:19] + RESULT=1
[2025-02-23 09:41:19] + sed -i -e /nodename=/d /scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag
[2025-02-23 09:41:19] ++ grep domain_name init_data.xml
[2025-02-23 09:41:19] ++ awk -F '>' '{print $2}'
[2025-02-23 09:41:19] ++ awk -F '<' '{print $1}'
[2025-02-23 09:41:19] ++ sed -e 's# #_#g'
[2025-02-23 09:41:19] + hostname=skurut07.grid.cesnet.cz
[2025-02-23 09:41:19] ++ grep user_name init_data.xml
[2025-02-23 09:41:19] ++ awk -F '<' '{print $1}'
[2025-02-23 09:41:19] ++ awk -F '>' '{print $2}'
[2025-02-23 09:41:19] ++ sed -e 's# #_#g'
[2025-02-23 09:41:19] + username=praguelcg2
[2025-02-23 09:41:19] + nodename=praguelcg2@skurut07.grid.cesnet.cz
[2025-02-23 09:41:19] + echo nodename=praguelcg2@skurut07.grid.cesnet.cz
[2025-02-23 09:41:19] + '[' -n 4 ']'
[2025-02-23 09:41:19] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot4/slots/0/nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag
[2025-02-23 09:41:19] + echo exitcode=1
[2025-02-23 09:41:19] + runtimeenvironments=
[2025-02-23 09:41:19] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-02-23 09:41:19] + RTE_function_0 2
[2025-02-23 09:41:19] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-23 09:41:19] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-02-23 09:41:19] + export BOINC_APP=ATLAS
[2025-02-23 09:41:19] + BOINC_APP=ATLAS
[2025-02-23 09:41:19] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-23 09:41:19] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-02-23 09:41:19] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-23 09:41:19] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-02-23 09:41:19] + '[' -z 2 ']'
[2025-02-23 09:41:19] + '[' 2 == 1 ']'
[2025-02-23 09:41:19] + '[' 0 -ne 0 ']'
[2025-02-23 09:41:19] + echo 'zip all output files'
[2025-02-23 09:41:19] + flist='*.diag '
[2025-02-23 09:41:19] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-23 09:41:19] + '[' -e ./heartbeat.json ']'
[2025-02-23 09:41:19] + flist='*.diag  ./heartbeat.json'
[2025-02-23 09:41:19] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-23 09:41:19] + '[' -e ./output.list ']'
[2025-02-23 09:41:19] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-23 09:41:19] + '[' -e ./log.43078919._075478.job.log.1 ']'
[2025-02-23 09:41:19] + flist='*.diag  ./heartbeat.json ./log.43078919._075478.job.log.1'
[2025-02-23 09:41:19] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-23 09:41:19] + '[' -e ./log.43078919._075478.job.log.1 ']'
[2025-02-23 09:41:19] + flist='*.diag  ./heartbeat.json ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1'
[2025-02-23 09:41:19] + for f in ./heartbeat.json ./output.list ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1 ./gmlog/
[2025-02-23 09:41:19] + '[' -e ./gmlog/ ']'
[2025-02-23 09:41:19] + '[' -f output.list ']'
[2025-02-23 09:41:19] + tar cvf result.tar.gz nrwLDmvtp46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCRnKDm7TQOum.diag ./heartbeat.json ./log.43078919._075478.job.log.1 ./log.43078919._075478.job.log.1
[2025-02-23 09:41:19] + '[' xgnutime = xcgroup ']'
[2025-02-23 09:41:19] + '[' -n '' ']'
[2025-02-23 09:41:19] + '[' -n '' ']'
[2025-02-23 09:41:19] ++ date +%s
[2025-02-23 09:41:19] + ACCOUNTING_ENDTIME=1740299354
[2025-02-23 09:41:19] ++ date -d '1970-01-01 UTC 1740299165 seconds' +%Y%m%d%H%M%SZ
[2025-02-23 09:41:19] + echo LRMSStartTime=20250223092605Z
[2025-02-23 09:41:19] ++ date -d '1970-01-01 UTC 1740299354 seconds' +%Y%m%d%H%M%SZ
[2025-02-23 09:41:19] + echo LRMSEndTime=20250223092914Z
[2025-02-23 09:41:19] + echo walltime=189
[2025-02-23 09:41:19] + echo exitcode=1
[2025-02-23 09:41:19] + exit 1
[2025-02-23 09:41:19] ./PanDA_Pilot-6518672604/log.EVNTtoHITS
[2025-02-23 09:41:19] ./PanDA_Pilot-6518672604/PoolFileCatalog.xml
[2025-02-23 09:41:19] ./PanDA_Pilot-6518672604/prmon.log
[2025-02-23 09:41:19] ./PanDA_Pilot-6518672604/pilotlog.txt
[2025-02-23 09:41:19] ./runtime_log.err
[2025-02-23 09:41:19] ./log.43078919._075478.job.log.1
[2025-02-23 09:41:19] ./runtime_log
[2025-02-23 09:41:19] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-02-23 09:41:19] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-02-23 09:41:19] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-02-23 09:41:19] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-02-23 09:41:19] ./pilot3/pilot/util/loggingsupport.py
[2025-02-23 09:41:19] ./pilot3/pilot/util/realtimelogger.py
[2025-02-23 09:41:19] ./pilotlog.txt
09:52:12 (1919098): run_atlas exited; CPU time 16.651680
09:52:12 (1919098): app exit status: 0x1
09:52:12 (1919098): called boinc_finish(195)

</stderr_txt>
]]>

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