Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:14:03 (2711489): wrapper (7.7.26015): starting
09:14:03 (2711489): wrapper: running run_atlas (--nthreads 4)
[2025-02-21 09:14:03] Arguments: --nthreads 4
[2025-02-21 09:14:03] Threads: 4
[2025-02-21 09:14:03] Checking for CVMFS
[2025-02-21 09:14:03] No cvmfs_config command found, will try listing directly
[2025-02-21 09:14:03] CVMFS is ok
[2025-02-21 09:14:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 09:14:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 09:14:03] Further information can be found at the LHC@home message board.
[2025-02-21 09:14:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 09:14:03] Checking for apptainer binary...
[2025-02-21 09:14:03] which: no apptainer in ((null))
[2025-02-21 09:14:03] apptainer is not installed, using version from CVMFS
[2025-02-21 09:14:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 09:14:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-02-21 09:14:03] apptainer works
[2025-02-21 09:14:03] Set ATHENA_PROC_NUMBER=4
[2025-02-21 09:14:03] Set ATHENA_CORE_NUMBER=4
[2025-02-21 09:14:04] Starting ATLAS job with PandaID=6516815484
[2025-02-21 09:14:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:58:39 (3448379): wrapper (7.7.26015): starting
11:58:39 (3448379): wrapper: running run_atlas (--nthreads 4)
[2025-02-21 11:58:39] Arguments: --nthreads 4
[2025-02-21 11:58:39] Threads: 4
[2025-02-21 11:58:39] This job has been restarted, cleaning up previous attempt
[2025-02-21 11:58:39] Checking for CVMFS
[2025-02-21 11:58:39] No cvmfs_config command found, will try listing directly
[2025-02-21 11:58:40] CVMFS is ok
[2025-02-21 11:58:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 11:58:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 11:58:40] Further information can be found at the LHC@home message board.
[2025-02-21 11:58:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 11:58:40] Checking for apptainer binary...
[2025-02-21 11:58:40] which: no apptainer in ((null))
[2025-02-21 11:58:40] apptainer is not installed, using version from CVMFS
[2025-02-21 11:58:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 11:58:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-02-21 11:58:40] apptainer works
[2025-02-21 11:58:40] Set ATHENA_PROC_NUMBER=4
[2025-02-21 11:58:40] Set ATHENA_CORE_NUMBER=4
[2025-02-21 11:58:40] Starting ATLAS job with PandaID=6516815484
[2025-02-21 11:58:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:25:00 (60520): wrapper (7.7.26015): starting
12:25:00 (60520): wrapper: running run_atlas (--nthreads 4)
[2025-02-21 12:25:00] Arguments: --nthreads 4
[2025-02-21 12:25:00] Threads: 4
[2025-02-21 12:25:00] This job has been restarted, cleaning up previous attempt
[2025-02-21 12:25:00] Checking for CVMFS
[2025-02-21 12:25:00] No cvmfs_config command found, will try listing directly
[2025-02-21 12:25:00] CVMFS is ok
[2025-02-21 12:25:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 12:25:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 12:25:00] Further information can be found at the LHC@home message board.
[2025-02-21 12:25:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 12:25:00] Checking for apptainer binary...
[2025-02-21 12:25:00] which: no apptainer in ((null))
[2025-02-21 12:25:00] apptainer is not installed, using version from CVMFS
[2025-02-21 12:25:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 12:25:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-02-21 12:25:01] apptainer works
[2025-02-21 12:25:01] Set ATHENA_PROC_NUMBER=4
[2025-02-21 12:25:01] Set ATHENA_CORE_NUMBER=4
[2025-02-21 12:25:01] Starting ATLAS job with PandaID=6516815484
[2025-02-21 12:25:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 18:56:27]  *** The last 200 lines of the pilot log: ***
[2025-02-21 18:56:27] 2025-02-21 17:56:08,137 | INFO     | mean x: 1740149443.5
[2025-02-21 18:56:27] 2025-02-21 17:56:08,137 | INFO     | mean y: 2379146.6208791207
[2025-02-21 18:56:27] 2025-02-21 17:56:08,137 | INFO     | -- intersect: -1825401707.8883686
[2025-02-21 18:56:27] 2025-02-21 17:56:08,138 | INFO     | intersect: -1825401707.8883686
[2025-02-21 18:56:27] 2025-02-21 17:56:08,138 | INFO     | chi2: 0.00344253594209702
[2025-02-21 18:56:27] 2025-02-21 17:56:08,138 | INFO     | current chi2=0.00344253594209702 (change=56.72501524051577 %)
[2025-02-21 18:56:27] 2025-02-21 17:56:08,138 | INFO     | model: linear, x: [1740138677.0, 1740138738.0, 1740138799.0, 1740138860.0, 1740138921.0, 1740138982.0, 1740139043.0, 1740139104.0, 1740139165.0, 1740139226.0, 1740
[2025-02-21 18:56:27] 2025-02-21 17:56:08,138 | INFO     | sum of square deviations: 14346910860.0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,140 | INFO     | sum of deviations: 12460338423.0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,140 | INFO     | mean x: 1740149596.0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,140 | INFO     | mean y: 2379960.367688022
[2025-02-21 18:56:27] 2025-02-21 17:56:08,140 | INFO     | -- intersect: -1508945584.510391
[2025-02-21 18:56:27] 2025-02-21 17:56:08,140 | INFO     | intersect: -1508945584.510391
[2025-02-21 18:56:27] 2025-02-21 17:56:08,141 | INFO     | chi2: 0.0012785609383126019
[2025-02-21 18:56:27] 2025-02-21 17:56:08,141 | INFO     | current chi2=0.0012785609383126019 (change=62.859910257501426 %)
[2025-02-21 18:56:27] 2025-02-21 17:56:08,141 | INFO     | model: linear, x: [1740138982.0, 1740139043.0, 1740139104.0, 1740139165.0, 1740139226.0, 1740139287.0, 1740139348.0, 1740139409.0, 1740139470.0, 1740139531.0, 1740
[2025-02-21 18:56:27] 2025-02-21 17:56:08,141 | INFO     | sum of square deviations: 13755764892.5
[2025-02-21 18:56:27] 2025-02-21 17:56:08,143 | INFO     | sum of deviations: 10694426670.000006
[2025-02-21 18:56:27] 2025-02-21 17:56:08,143 | INFO     | mean x: 1740149748.5
[2025-02-21 18:56:27] 2025-02-21 17:56:08,143 | INFO     | mean y: 2380415.559322034
[2025-02-21 18:56:27] 2025-02-21 17:56:08,143 | INFO     | -- intersect: -1350499924.1082165
[2025-02-21 18:56:27] 2025-02-21 17:56:08,143 | INFO     | intersect: -1350499924.1082165
[2025-02-21 18:56:27] 2025-02-21 17:56:08,143 | INFO     | chi2: 0.0007735805461849799
[2025-02-21 18:56:27] 2025-02-21 17:56:08,143 | INFO     | current chi2=0.0007735805461849799 (change=39.49599717899068 %)
[2025-02-21 18:56:27] 2025-02-21 17:56:08,143 | INFO     | model: linear, x: [1740139287.0, 1740139348.0, 1740139409.0, 1740139470.0, 1740139531.0, 1740139592.0, 1740139653.0, 1740139714.0, 1740139775.0, 1740139836.0, 1740
[2025-02-21 18:56:27] 2025-02-21 17:56:08,143 | INFO     | sum of square deviations: 13181084350.0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,145 | INFO     | sum of deviations: 9368549092.0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,145 | INFO     | mean x: 1740149901.0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,145 | INFO     | mean y: 2380767.2349570203
[2025-02-21 18:56:27] 2025-02-21 17:56:08,145 | INFO     | -- intersect: -1234443104.160528
[2025-02-21 18:56:27] 2025-02-21 17:56:08,145 | INFO     | intersect: -1234443104.160528
[2025-02-21 18:56:27] 2025-02-21 17:56:08,145 | INFO     | chi2: 0.0005213822276815079
[2025-02-21 18:56:27] 2025-02-21 17:56:08,145 | INFO     | current chi2=0.0005213822276815079 (change=32.601429773179156 %)
[2025-02-21 18:56:27] 2025-02-21 17:56:08,146 | INFO     | model: linear, x: [1740139592.0, 1740139653.0, 1740139714.0, 1740139775.0, 1740139836.0, 1740139897.0, 1740139958.0, 1740140019.0, 1740140080.0, 1740140141.0, 1740
[2025-02-21 18:56:27] 2025-02-21 17:56:08,146 | INFO     | sum of square deviations: 12622636670.0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,148 | INFO     | sum of deviations: 8407774539.5
[2025-02-21 18:56:27] 2025-02-21 17:56:08,148 | INFO     | mean x: 1740150053.5
[2025-02-21 18:56:27] 2025-02-21 17:56:08,148 | INFO     | mean y: 2381029.456395349
[2025-02-21 18:56:27] 2025-02-21 17:56:08,148 | INFO     | -- intersect: -1156710347.1891518
[2025-02-21 18:56:27] 2025-02-21 17:56:08,148 | INFO     | intersect: -1156710347.1891518
[2025-02-21 18:56:27] 2025-02-21 17:56:08,148 | INFO     | chi2: 0.00041405991792491526
[2025-02-21 18:56:27] 2025-02-21 17:56:08,148 | INFO     | current chi2=0.00041405991792491526 (change=20.584190265524676 %)
[2025-02-21 18:56:27] 2025-02-21 17:56:08,148 | INFO     | left removable region: 80
[2025-02-21 18:56:27] 2025-02-21 17:56:08,148 | INFO     | model: linear, x: [1740142032.0, 1740142093.0, 1740142154.0, 1740142215.0, 1740142276.0, 1740142337.0, 1740142398.0, 1740142459.0, 1740142520.0, 1740142581.0, 1740
[2025-02-21 18:56:27] 2025-02-21 17:56:08,148 | INFO     | sum of square deviations: 8205826414.5
[2025-02-21 18:56:27] 2025-02-21 17:56:08,150 | INFO     | sum of deviations: 4730323354.499999
[2025-02-21 18:56:27] 2025-02-21 17:56:08,150 | INFO     | mean x: 1740151090.5
[2025-02-21 18:56:27] 2025-02-21 17:56:08,150 | INFO     | mean y: 2381904.0570469797
[2025-02-21 18:56:27] 2025-02-21 17:56:08,150 | INFO     | -- intersect: -1000744036.9457341
[2025-02-21 18:56:27] 2025-02-21 17:56:08,150 | INFO     | intersect: -1000744036.9457341
[2025-02-21 18:56:27] 2025-02-21 17:56:08,150 | INFO     | chi2: 0.00032035345977881566
[2025-02-21 18:56:27] 2025-02-21 17:56:08,150 | INFO     | -- intersect: -1000744036.9457341
[2025-02-21 18:56:27] 2025-02-21 17:56:08,150 | INFO     | current memory leak: 0.58 B/s (using 298 data points, chi2=0.00)
[2025-02-21 18:56:27] 2025-02-21 17:56:08,151 | INFO     | ..............................
[2025-02-21 18:56:27] 2025-02-21 17:56:08,151 | INFO     | . Timing measurements:
[2025-02-21 18:56:27] 2025-02-21 17:56:08,151 | INFO     | . get job = 0 s
[2025-02-21 18:56:27] 2025-02-21 17:56:08,151 | INFO     | . initial setup = 1 s
[2025-02-21 18:56:27] 2025-02-21 17:56:08,151 | INFO     | . payload setup = 7 s
[2025-02-21 18:56:27] 2025-02-21 17:56:08,151 | INFO     | . stage-in = 0 s
[2025-02-21 18:56:27] 2025-02-21 17:56:08,151 | INFO     | . payload execution = 23418 s
[2025-02-21 18:56:27] 2025-02-21 17:56:08,151 | INFO     | . stage-out = 0 s
[2025-02-21 18:56:27] 2025-02-21 17:56:08,151 | INFO     | . log creation = 0 s
[2025-02-21 18:56:27] 2025-02-21 17:56:08,151 | INFO     | ..............................
[2025-02-21 18:56:27] 2025-02-21 17:56:08,210 | INFO     | 
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | job summary report
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | --------------------------------------------------
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | PanDA job id: 6516815484
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | task id: 43205075
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | errors: (none)
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | pilot state: finished 
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | transexitcode: 0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | exeerrorcode: 0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | exeerrordiag: 
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | exitcode: 0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | exitmsg: OK
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | cpuconsumptiontime: 87897 s
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | nevents: 400
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | neventsw: 0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | pid: 403189
[2025-02-21 18:56:27] 2025-02-21 17:56:08,211 | INFO     | pgrp: 403189
[2025-02-21 18:56:27] 2025-02-21 17:56:08,212 | INFO     | corecount: 4
[2025-02-21 18:56:27] 2025-02-21 17:56:08,212 | INFO     | event service: False
[2025-02-21 18:56:27] 2025-02-21 17:56:08,212 | INFO     | sizes: {0: 2383330, 5: 2383536, 11: 2383592, 23429: 2418439, 23431: 2427402, 23432: 2427458, 23436: 2427756}
[2025-02-21 18:56:27] 2025-02-21 17:56:08,212 | INFO     | --------------------------------------------------
[2025-02-21 18:56:27] 2025-02-21 17:56:08,212 | INFO     | 
[2025-02-21 18:56:27] 2025-02-21 17:56:08,212 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-02-21 18:56:27] 2025-02-21 17:56:08,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,232 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 18:56:27] 2025-02-21 17:56:08,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 18:56:27] 2025-02-21 17:56:08,233 | INFO     | job 6516815484 has completed (purged errors)
[2025-02-21 18:56:27] 2025-02-21 17:56:08,233 | INFO     | overall cleanup function is called
[2025-02-21 18:56:27] 2025-02-21 17:56:08,311 | WARNING  | process 403189 can no longer be monitored (due to stat problems) - aborting
[2025-02-21 18:56:27] 2025-02-21 17:56:08,599 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-21 18:56:27] 2025-02-21 17:56:08,797 | INFO     | number of running child processes to parent process 403189: 1
[2025-02-21 18:56:27] 2025-02-21 17:56:08,797 | INFO     | maximum number of monitored processes: 6
[2025-02-21 18:56:27] 2025-02-21 17:56:08,797 | INFO     | aborting job monitoring since job object (job id=6516815484) has expired
[2025-02-21 18:56:27] 2025-02-21 17:56:09,241 | INFO     | --- collectZombieJob: --- 10, [403189]
[2025-02-21 18:56:27] 2025-02-21 17:56:09,242 | INFO     | zombie collector waiting for pid 403189
[2025-02-21 18:56:27] 2025-02-21 17:56:09,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 18:56:27] 2025-02-21 17:56:09,242 | INFO     | collected zombie processes
[2025-02-21 18:56:27] 2025-02-21 17:56:09,242 | INFO     | will attempt to kill all subprocesses of pid=403189
[2025-02-21 18:56:27] 2025-02-21 17:56:09,450 | INFO     | process IDs to be killed: [403189] (in reverse order)
[2025-02-21 18:56:27] 2025-02-21 17:56:09,624 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 18:56:27] 2025-02-21 17:56:09,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 18:56:27] 2025-02-21 17:56:09,643 | INFO     | did not find any defunct processes belonging to 403189
[2025-02-21 18:56:27] 2025-02-21 17:56:09,654 | INFO     | did not find any defunct processes belonging to 403189
[2025-02-21 18:56:27] 2025-02-21 17:56:09,655 | INFO     | ready for new job
[2025-02-21 18:56:27] 2025-02-21 17:56:09,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 18:56:27] 2025-02-21 17:56:09,658 | INFO     | **************************************
[2025-02-21 18:56:27] 2025-02-21 17:56:09,658 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 18:56:27] 2025-02-21 17:56:09,658 | INFO     | **************************************
[2025-02-21 18:56:27] 2025-02-21 17:56:09,658 | INFO     | 
[2025-02-21 18:56:27] 2025-02-21 17:56:09,663 | INFO     | architecture information:
[2025-02-21 18:56:27] 2025-02-21 17:56:09,663 | INFO     | executing command: cat /etc/os-release
[2025-02-21 18:56:27] 2025-02-21 17:56:09,678 | INFO     | cat /etc/os-release:
[2025-02-21 18:56:27] NAME="CentOS Linux"
[2025-02-21 18:56:27] VERSION="7 (Core)"
[2025-02-21 18:56:27] ID="centos"
[2025-02-21 18:56:27] ID_LIKE="rhel fedora"
[2025-02-21 18:56:27] VERSION_ID="7"
[2025-02-21 18:56:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 18:56:27] ANSI_COLOR="0;31"
[2025-02-21 18:56:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 18:56:27] HOME_URL="https://www.centos.org/"
[2025-02-21 18:56:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 18:56:27] 
[2025-02-21 18:56:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 18:56:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 18:56:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 18:56:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 18:56:27] 
[2025-02-21 18:56:27] 2025-02-21 17:56:09,678 | INFO     | **************************************
[2025-02-21 18:56:27] 2025-02-21 17:56:10,181 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-02-21 18:56:27] 2025-02-21 17:56:10,196 | INFO     | sufficient remaining disk space (3274021273600 B)
[2025-02-21 18:56:27] 2025-02-21 17:56:10,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 18:56:27] 2025-02-21 17:56:10,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 18:56:27] 2025-02-21 17:56:10,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 18:56:27] 2025-02-21 17:56:10,197 | INFO     | aborting loop
[2025-02-21 18:56:27] 2025-02-21 17:56:10,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 18:56:27] 2025-02-21 17:56:10,198 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 18:56:27] 2025-02-21 17:56:10,198 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-21 18:56:27] 2025-02-21 17:56:10,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 18:56:27] 2025-02-21 17:56:10,199 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 18:56:27] 2025-02-21 17:56:10,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 18:56:27] 2025-02-21 17:56:10,200 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 18:56:27] 2025-02-21 17:56:10,456 | INFO     | all data control threads have been joined
[2025-02-21 18:56:27] 2025-02-21 17:56:11,202 | INFO     | [job] retrieve thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:11,203 | INFO     | [job] job monitor thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:11,204 | INFO     | [job] queue monitor thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:11,383 | INFO     | all payload control threads have been joined
[2025-02-21 18:56:27] 2025-02-21 17:56:11,460 | INFO     | [data] control thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:11,539 | INFO     | [job] validate thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:11,578 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:11,718 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:11,862 | INFO     | all job control threads have been joined
[2025-02-21 18:56:27] 2025-02-21 17:56:12,064 | INFO     | [payload] failed_post thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:12,204 | INFO     | [data] copytool_out thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:12,322 | INFO     | [data] copytool_in thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:12,328 | INFO     | [payload] validate_post thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:12,389 | INFO     | [payload] control thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:12,589 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:12,870 | INFO     | [job] control thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:14,205 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:20,534 | INFO     | job.realtimelogging is not enabled
[2025-02-21 18:56:27] 2025-02-21 17:56:21,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 18:56:27] 2025-02-21 17:56:21,957 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23360281376576)>', '<ExcThread(monitor, started 23359981070080)>']
[2025-02-21 18:56:27] 2025-02-21 17:56:22,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 18:56:27] 2025-02-21 17:56:22,261 | INFO     | [monitor] control thread has ended
[2025-02-21 18:56:27] 2025-02-21 17:56:26,977 | INFO     | all workflow threads have been joined
[2025-02-21 18:56:27] 2025-02-21 17:56:26,977 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 18:56:27] 2025-02-21 17:56:26,978 | INFO     | traces error code: 0
[2025-02-21 18:56:27] 2025-02-21 17:56:26,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 18:56:27] 2025-02-21 17:56:27,101 [wrapper] ==== pilot stdout END ====
[2025-02-21 18:56:27] 2025-02-21 17:56:27,105 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 18:56:27] 2025-02-21 17:56:27,107 [wrapper] pilotpid: 185117
[2025-02-21 18:56:27] 2025-02-21 17:56:27,110 [wrapper] Pilot exit status: 0
[2025-02-21 18:56:27] 2025-02-21 17:56:27,119 [wrapper] pandaids: 6516815484 6516815484 6516815484
[2025-02-21 18:56:27] 2025-02-21 17:56:27,215 [wrapper] cleanup supervisor_pilot 2382993 185127
[2025-02-21 18:56:27] 2025-02-21 17:56:27,218 [wrapper] Test setup, not cleaning
[2025-02-21 18:56:27] 2025-02-21 17:56:27,224 [wrapper] apfmon messages muted
[2025-02-21 18:56:27] 2025-02-21 17:56:27,226 [wrapper] ==== wrapper stdout END ====
[2025-02-21 18:56:27] 2025-02-21 17:56:27,229 [wrapper] ==== wrapper stderr END ====
[2025-02-21 18:56:27]  *** Error codes and diagnostics ***
[2025-02-21 18:56:27]     "exeErrorCode": 0,
[2025-02-21 18:56:27]     "exeErrorDiag": "",
[2025-02-21 18:56:27]     "pilotErrorCode": 0,
[2025-02-21 18:56:27]     "pilotErrorDiag": "",
[2025-02-21 18:56:27]  *** Listing of results directory ***
[2025-02-21 18:56:27] total 1005328
[2025-02-21 18:56:27] drwx------ 4 boinc boinc      4096 Dec 18 12:03 pilot3
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc    491065 Feb 17 14:37 pilot3.tar.gz
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc      5118 Feb 17 14:40 queuedata.json
[2025-02-21 18:56:27] -rwx------ 1 boinc boinc     35862 Feb 17 14:41 runpilot2-wrapper.sh
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc       100 Feb 21 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 18:56:27] -rwxr-xr-x 1 boinc boinc      7986 Feb 21 09:13 run_atlas
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc       105 Feb 21 09:13 job.xml
[2025-02-21 18:56:27] -rw-r--r-- 3 boinc boinc 344516872 Feb 21 09:14 EVNT.43092757._000763.pool.root.1
[2025-02-21 18:56:27] -rw-r--r-- 3 boinc boinc 344516872 Feb 21 09:14 ATLAS.root_0
[2025-02-21 18:56:27] -rw-r--r-- 2 boinc boinc     17569 Feb 21 09:14 start_atlas.sh
[2025-02-21 18:56:27] drwxrwx--x 2 boinc boinc      4096 Feb 21 09:14 shared
[2025-02-21 18:56:27] -rw-r--r-- 2 boinc boinc    503565 Feb 21 09:14 input.tar.gz
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc         0 Feb 21 09:14 boinc_lockfile
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc      2557 Feb 21 12:25 pandaJob.out
[2025-02-21 18:56:27] -rw------- 1 boinc boinc       424 Feb 21 12:25 setup.sh.local
[2025-02-21 18:56:27] -rw------- 1 boinc boinc    991368 Feb 21 12:25 agis_schedconf.cvmfs.json
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc      6683 Feb 21 15:15 init_data.xml
[2025-02-21 18:56:27] -rw------- 1 boinc boinc 330141473 Feb 21 18:55 HITS.43205075._038222.pool.root.1
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc       533 Feb 21 18:55 boinc_task_state.xml
[2025-02-21 18:56:27] -rw------- 1 boinc boinc        96 Feb 21 18:55 pilot_heartbeat.json
[2025-02-21 18:56:27] -rw------- 1 boinc boinc      1038 Feb 21 18:55 memory_monitor_summary.json
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc      8192 Feb 21 18:56 boinc_mmap_file
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc        29 Feb 21 18:56 wrapper_checkpoint.txt
[2025-02-21 18:56:27] -rw------- 1 boinc boinc   1582569 Feb 21 18:56 agis_ddmendpoints.agis.ALL.json
[2025-02-21 18:56:27] -rw------- 1 boinc boinc    464629 Feb 21 18:56 log.43205075._038222.job.log.tgz.1
[2025-02-21 18:56:27] -rw------- 1 boinc boinc      7719 Feb 21 18:56 heartbeat.json
[2025-02-21 18:56:27] -rw------- 1 boinc boinc      4421 Feb 21 18:56 pilotlog.txt
[2025-02-21 18:56:27] -rw------- 1 boinc boinc   2766488 Feb 21 18:56 log.43205075._038222.job.log.1
[2025-02-21 18:56:27] -rw------- 1 boinc boinc       357 Feb 21 18:56 output.list
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc       620 Feb 21 18:56 runtime_log
[2025-02-21 18:56:27] -rw------- 1 boinc boinc   3246080 Feb 21 18:56 result.tar.gz
[2025-02-21 18:56:27] -rw------- 1 boinc boinc       920 Feb 21 18:56 vrSKDmDYG46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmg3jKDmDgLs2n.diag
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc     11501 Feb 21 18:56 runtime_log.err
[2025-02-21 18:56:27] -rw-r--r-- 1 boinc boinc     25241 Feb 21 18:56 stderr.txt
[2025-02-21 18:56:27] HITS file was successfully produced:
[2025-02-21 18:56:27] -rw------- 1 boinc boinc 330141473 Feb 21 18:55 shared/HITS.pool.root.1
[2025-02-21 18:56:27]  *** Contents of shared directory: ***
[2025-02-21 18:56:27] total 662540
[2025-02-21 18:56:27] -rw-r--r-- 3 boinc boinc 344516872 Feb 21 09:14 ATLAS.root_0
[2025-02-21 18:56:27] -rw-r--r-- 2 boinc boinc     17569 Feb 21 09:14 start_atlas.sh
[2025-02-21 18:56:27] -rw-r--r-- 2 boinc boinc    503565 Feb 21 09:14 input.tar.gz
[2025-02-21 18:56:27] -rw------- 1 boinc boinc 330141473 Feb 21 18:55 HITS.pool.root.1
[2025-02-21 18:56:27] -rw------- 1 boinc boinc   3246080 Feb 21 18:56 result.tar.gz
18:56:28 (60520): run_atlas exited; CPU time 87658.747671
18:56:28 (60520): called boinc_finish(0)

</stderr_txt>
]]>

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