Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:41:06 (239885): wrapper (7.7.26015): starting
18:41:06 (239885): wrapper: running run_atlas (--nthreads 8)
[2024-09-26 18:41:06] Arguments: --nthreads 8
[2024-09-26 18:41:06] Threads: 8
[2024-09-26 18:41:06] Checking for CVMFS
[2024-09-26 18:41:06] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-26 18:41:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-26 18:41:06] Running cvmfs_config stat atlas.cern.ch
[2024-09-26 18:41:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-26 18:41:06] 2.11.2.0 243769 958 100436 137689 2 205 13175694 18432000 10478 130560 0 4691331 98.608 16928021 62646 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-09-26 18:41:06] CVMFS is ok
[2024-09-26 18:41:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-26 18:41:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-26 18:41:06] Further information can be found at the LHC@home message board.
[2024-09-26 18:41:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-26 18:41:06] Checking for apptainer binary...
[2024-09-26 18:41:06] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-26 18:41:06] Running /usr/bin/apptainer --version
[2024-09-26 18:41:06] apptainer version 1.3.2-1.el7
[2024-09-26 18:41:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-26 18:41:07] c-211-33-3.aglt2.org
[2024-09-26 18:41:07] apptainer works
[2024-09-26 18:41:07] Set ATHENA_PROC_NUMBER=8
[2024-09-26 18:41:07] Set ATHENA_CORE_NUMBER=8
[2024-09-26 18:41:07] Starting ATLAS job with PandaID=6347971687
[2024-09-26 18:41:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-26 19:30:46]  *** The last 200 lines of the pilot log: ***
[2024-09-26 19:30:46]  direct_access_wan=False
[2024-09-26 19:30:46]  domain=
[2024-09-26 19:30:46]  filesize=292611
[2024-09-26 19:30:46]  filetype=log
[2024-09-26 19:30:46]  guid=b20c3796-8e61-44ac-8437-d878dba22951
[2024-09-26 19:30:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-26 19:30:46]  is_altstaged=None
[2024-09-26 19:30:46]  is_tar=False
[2024-09-26 19:30:46]  lfn=log.41081631._000243.job.log.tgz.1
[2024-09-26 19:30:46]  mtime=0
[2024-09-26 19:30:46]  protocol_id=None
[2024-09-26 19:30:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-26 19:30:46]  replicas=None
[2024-09-26 19:30:46]  scope=mc23_13p6TeV
[2024-09-26 19:30:46]  status=None
[2024-09-26 19:30:46]  status_code=0
[2024-09-26 19:30:46]  storage_token=
[2024-09-26 19:30:46]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6347971687/log.41081631._000243.job.log.tgz.1
[2024-09-26 19:30:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/41/log.41081631._000243.job.log.tgz.1
[2024-09-26 19:30:46]  workdir=None
[2024-09-26 19:30:46] ]
[2024-09-26 19:30:46] 2024-09-26 23:30:28,614 | INFO     | transferring file log.41081631._000243.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6347971687/log.41081631._000243.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-09-26 19:30:46] 2024-09-26 23:30:28,614 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6347971687/log.41081631._000243.job.log.tgz.1 /tmp/boinchome/slots/5/log.41081631._000243.job
[2024-09-26 19:30:46] 2024-09-26 23:30:28,639 | INFO     | adding to output.list: log.41081631._000243.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/41/log.41081631._000243.job.log.tg
[2024-09-26 19:30:46] 2024-09-26 23:30:28,640 | INFO     | alt stage-out settings: ['pl', 'pw', 'w', 'default'], is_unified=False, altstageout=False, remain_files=0, has_altstorage=True
[2024-09-26 19:30:46] 2024-09-26 23:30:28,640 | INFO     | summary of transferred files:
[2024-09-26 19:30:46] 2024-09-26 23:30:28,640 | INFO     |  -- lfn=log.41081631._000243.job.log.tgz.1, status_code=0, status=transferred
[2024-09-26 19:30:46] 2024-09-26 23:30:28,640 | INFO     | stage-out finished correctly
[2024-09-26 19:30:46] 2024-09-26 23:30:28,685 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-26 19:30:46] 2024-09-26 23:30:30,505 | INFO     | job 6347971687 has state=finished
[2024-09-26 19:30:46] 2024-09-26 23:30:30,505 | INFO     | preparing for final server update for job 6347971687 in state='finished'
[2024-09-26 19:30:46] 2024-09-26 23:30:30,506 | INFO     | this job has now completed (state=finished)
[2024-09-26 19:30:46] 2024-09-26 23:30:30,506 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-26 19:30:46] 2024-09-26 23:30:30,506 | INFO     | log transfer has been attempted: DONE
[2024-09-26 19:30:46] 2024-09-26 23:30:30,506 | INFO     | job 6347971687 has finished - writing final server update
[2024-09-26 19:30:46] 2024-09-26 23:30:30,507 | INFO     | total number of processed events: 400 (read)
[2024-09-26 19:30:46] 2024-09-26 23:30:30,514 | INFO     | executing command: lscpu
[2024-09-26 19:30:46] 2024-09-26 23:30:30,588 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-09-26 19:30:46] 2024-09-26 23:30:30,589 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-26 19:30:46] 2024-09-26 23:30:30,671 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-26 19:30:46] 2024-09-26 23:30:33,442 | INFO     | CPU arch script returned: x86-64-v4
[2024-09-26 19:30:46] 2024-09-26 23:30:33,442 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6347971687/memory_monitor_summary.json (trf name=prmon)
[2024-09-26 19:30:46] 2024-09-26 23:30:33,444 | INFO     | extracted standard info from prmon json
[2024-09-26 19:30:46] 2024-09-26 23:30:33,444 | INFO     | extracted standard memory fields from prmon json
[2024-09-26 19:30:46] 2024-09-26 23:30:33,444 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-26 19:30:46] 2024-09-26 23:30:33,444 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-26 19:30:46] 2024-09-26 23:30:33,444 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-26 19:30:46] 2024-09-26 23:30:33,446 | INFO     | fitting pss+swap vs Time
[2024-09-26 19:30:46] 2024-09-26 23:30:33,446 | INFO     | model: linear, x: [1727390804.0, 1727390865.0, 1727390926.0, 1727390987.0, 1727391048.0, 1727391109.0, 1727391170.0, 1727391231.0, 1727391292.0, 1727391353.0, 1727
[2024-09-26 19:30:46] 2024-09-26 23:30:33,447 | INFO     | sum of square deviations: 21358540.0
[2024-09-26 19:30:46] 2024-09-26 23:30:33,447 | INFO     | sum of deviations: 10762016805.0
[2024-09-26 19:30:46] 2024-09-26 23:30:33,447 | INFO     | mean x: 1727392024.0
[2024-09-26 19:30:46] 2024-09-26 23:30:33,447 | INFO     | mean y: 2298891.0
[2024-09-26 19:30:46] 2024-09-26 23:30:33,447 | INFO     | -- intersect: -870385938840.1821
[2024-09-26 19:30:46] 2024-09-26 23:30:33,447 | INFO     | intersect: -870385938840.1821
[2024-09-26 19:30:46] 2024-09-26 23:30:33,448 | INFO     | chi2: 1.8777615974994475
[2024-09-26 19:30:46] 2024-09-26 23:30:33,448 | INFO     | -- intersect: -870385938840.1821
[2024-09-26 19:30:46] 2024-09-26 23:30:33,448 | INFO     | current memory leak: 503.87 B/s (using 41 data points, chi2=1.88)
[2024-09-26 19:30:46] 2024-09-26 23:30:33,448 | INFO     | ..............................
[2024-09-26 19:30:46] 2024-09-26 23:30:33,449 | INFO     | . Timing measurements:
[2024-09-26 19:30:46] 2024-09-26 23:30:33,449 | INFO     | . get job = 0 s
[2024-09-26 19:30:46] 2024-09-26 23:30:33,449 | INFO     | . initial setup = 2 s
[2024-09-26 19:30:46] 2024-09-26 23:30:33,449 | INFO     | . payload setup = 4 s
[2024-09-26 19:30:46] 2024-09-26 23:30:33,449 | INFO     | . stage-in = 0 s
[2024-09-26 19:30:46] 2024-09-26 23:30:33,449 | INFO     | . payload execution = 2929 s
[2024-09-26 19:30:46] 2024-09-26 23:30:33,449 | INFO     | . stage-out = 0 s
[2024-09-26 19:30:46] 2024-09-26 23:30:33,449 | INFO     | . log creation = 0 s
[2024-09-26 19:30:46] 2024-09-26 23:30:33,449 | INFO     | ..............................
[2024-09-26 19:30:46] 2024-09-26 23:30:33,534 | INFO     | 
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | job summary report
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | --------------------------------------------------
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | PanDA job id: 6347971687
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | task id: 41081631
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | errors: (none)
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | pilot state: finished 
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | transexitcode: 0
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | exeerrorcode: 0
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | exeerrordiag: 
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | exitcode: 0
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | exitmsg: OK
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | cpuconsumptiontime: 16887 s
[2024-09-26 19:30:46] 2024-09-26 23:30:33,535 | INFO     | nevents: 400
[2024-09-26 19:30:46] 2024-09-26 23:30:33,536 | INFO     | neventsw: 0
[2024-09-26 19:30:46] 2024-09-26 23:30:33,536 | INFO     | pid: 262699
[2024-09-26 19:30:46] 2024-09-26 23:30:33,536 | INFO     | pgrp: 262699
[2024-09-26 19:30:46] 2024-09-26 23:30:33,536 | INFO     | corecount: 8
[2024-09-26 19:30:46] 2024-09-26 23:30:33,536 | INFO     | event service: False
[2024-09-26 19:30:46] 2024-09-26 23:30:33,536 | INFO     | sizes: {0: 2440258, 1: 2440457, 4: 2440663, 11: 2440691, 2937: 2466018, 2938: 2475226, 2943: 2475340}
[2024-09-26 19:30:46] 2024-09-26 23:30:33,536 | INFO     | --------------------------------------------------
[2024-09-26 19:30:46] 2024-09-26 23:30:33,536 | INFO     | 
[2024-09-26 19:30:46] 2024-09-26 23:30:33,536 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-09-26 19:30:46] 2024-09-26 23:30:33,562 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,562 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,562 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,562 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,563 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-26 19:30:46] 2024-09-26 23:30:33,564 | INFO     | job 6347971687 has completed (purged errors)
[2024-09-26 19:30:46] 2024-09-26 23:30:33,564 | INFO     | overall cleanup function is called
[2024-09-26 19:30:46] 2024-09-26 23:30:34,570 | INFO     | --- collectZombieJob: --- 10, [262699]
[2024-09-26 19:30:46] 2024-09-26 23:30:34,571 | INFO     | zombie collector waiting for pid 262699
[2024-09-26 19:30:46] 2024-09-26 23:30:34,571 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-26 19:30:46] 2024-09-26 23:30:34,571 | INFO     | collected zombie processes
[2024-09-26 19:30:46] 2024-09-26 23:30:34,571 | INFO     | will  attempt to kill all subprocesses of pid=262699
[2024-09-26 19:30:46] 2024-09-26 23:30:34,634 | WARNING  | process 262699 is no longer using CPU - aborting
[2024-09-26 19:30:46] 2024-09-26 23:30:34,634 | INFO     | aborting job monitoring since job object (job id=6347971687) has expired
[2024-09-26 19:30:46] 2024-09-26 23:30:34,720 | INFO     | process IDs to be killed: [262699] (in reverse order)
[2024-09-26 19:30:46] 2024-09-26 23:30:34,794 | WARNING  | found no corresponding commands to process id(s)
[2024-09-26 19:30:46] 2024-09-26 23:30:34,795 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-26 19:30:46] 2024-09-26 23:30:34,802 | INFO     | did not find any defunct processes belonging to 262699
[2024-09-26 19:30:46] 2024-09-26 23:30:34,808 | INFO     | did not find any defunct processes belonging to 262699
[2024-09-26 19:30:46] 2024-09-26 23:30:34,808 | INFO     | ready for new job
[2024-09-26 19:30:46] 2024-09-26 23:30:34,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-26 19:30:46] 2024-09-26 23:30:34,809 | INFO     | *************************************
[2024-09-26 19:30:46] 2024-09-26 23:30:34,809 | INFO     | ***  PanDA Pilot version 3.8.2.8  ***
[2024-09-26 19:30:46] 2024-09-26 23:30:34,809 | INFO     | *************************************
[2024-09-26 19:30:46] 2024-09-26 23:30:34,809 | INFO     | 
[2024-09-26 19:30:46] 2024-09-26 23:30:34,813 | INFO     | architecture information:
[2024-09-26 19:30:46] 2024-09-26 23:30:34,813 | INFO     | executing command: cat /etc/os-release
[2024-09-26 19:30:46] 2024-09-26 23:30:34,835 | INFO     | cat /etc/os-release:
[2024-09-26 19:30:46] NAME="CentOS Linux"
[2024-09-26 19:30:46] VERSION="7 (Core)"
[2024-09-26 19:30:46] ID="centos"
[2024-09-26 19:30:46] ID_LIKE="rhel fedora"
[2024-09-26 19:30:46] VERSION_ID="7"
[2024-09-26 19:30:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-26 19:30:46] ANSI_COLOR="0;31"
[2024-09-26 19:30:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-26 19:30:46] HOME_URL="https://www.centos.org/"
[2024-09-26 19:30:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-26 19:30:46] 
[2024-09-26 19:30:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-26 19:30:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-26 19:30:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-26 19:30:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-26 19:30:46] 
[2024-09-26 19:30:46] 2024-09-26 23:30:34,835 | INFO     | *************************************
[2024-09-26 19:30:46] 2024-09-26 23:30:35,338 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-09-26 19:30:46] 2024-09-26 23:30:35,364 | INFO     | sufficient remaining disk space (104196997120 B)
[2024-09-26 19:30:46] 2024-09-26 23:30:35,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-26 19:30:46] 2024-09-26 23:30:35,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-26 19:30:46] 2024-09-26 23:30:35,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-26 19:30:46] 2024-09-26 23:30:35,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-26 19:30:46] 2024-09-26 23:30:35,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-26 19:30:46] 2024-09-26 23:30:35,366 | INFO     | will abort loop
[2024-09-26 19:30:46] 2024-09-26 23:30:35,456 | INFO     | all data control threads have been joined
[2024-09-26 19:30:46] 2024-09-26 23:30:35,803 | INFO     | found 0 job(s) in 20 queues
[2024-09-26 19:30:46] 2024-09-26 23:30:35,804 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-26 19:30:46] 2024-09-26 23:30:35,804 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-26 19:30:46] 2024-09-26 23:30:36,047 | INFO     | all payload control threads have been joined
[2024-09-26 19:30:46] 2024-09-26 23:30:36,370 | INFO     | [job] retrieve thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:36,372 | INFO     | [job] queue monitor thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:36,372 | INFO     | [job] job monitor thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:36,462 | INFO     | [data] control thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:36,514 | INFO     | [payload] validate_pre thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:36,636 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:36,704 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-26 19:30:46] 2024-09-26 23:30:36,960 | INFO     | all job control threads have been joined
[2024-09-26 19:30:46] 2024-09-26 23:30:37,034 | INFO     | [payload] validate_post thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:37,052 | INFO     | [payload] control thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:37,288 | INFO     | [job] validate thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:37,311 | INFO     | [job] create_data_payload thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:37,645 | INFO     | [payload] failed_post thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:37,792 | INFO     | [payload] execute_payloads thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:37,828 | INFO     | [data] copytool_in thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:37,964 | INFO     | [job] control thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:38,714 | INFO     | [data] copytool_out thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:39,374 | INFO     | [data] queue_monitor thread has finished
[2024-09-26 19:30:46] 2024-09-26 23:30:40,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647918368576)>', '<ExcThread(monitor, started 140647344363264)>']
[2024-09-26 19:30:46] 2024-09-26 23:30:41,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-26 19:30:46] 2024-09-26 23:30:41,831 | INFO     | [monitor] control thread has ended
[2024-09-26 19:30:46] 2024-09-26 23:30:45,869 | INFO     | all workflow threads have been joined
[2024-09-26 19:30:46] 2024-09-26 23:30:45,870 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-26 19:30:46] 2024-09-26 23:30:45,870 | INFO     | traces error code: 0
[2024-09-26 19:30:46] 2024-09-26 23:30:45,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-26 19:30:46] 2024-09-26 23:30:45,987 [wrapper] ==== pilot stdout END ====
[2024-09-26 19:30:46] 2024-09-26 23:30:45,990 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-26 19:30:46] 2024-09-26 23:30:45,993 [wrapper] pilotpid: 247317
[2024-09-26 19:30:46] 2024-09-26 23:30:45,996 [wrapper] Pilot exit status: 0
[2024-09-26 19:30:46] 2024-09-26 23:30:46,009 [wrapper] pandaids: 6347971687
[2024-09-26 19:30:46] 2024-09-26 23:30:46,076 [wrapper] cleanup supervisor_pilot 220839 247318
[2024-09-26 19:30:46] 2024-09-26 23:30:46,079 [wrapper] Test setup, not cleaning
[2024-09-26 19:30:46] 2024-09-26 23:30:46,082 [wrapper] ==== wrapper stdout END ====
[2024-09-26 19:30:46] 2024-09-26 23:30:46,085 [wrapper] ==== wrapper stderr END ====
[2024-09-26 19:30:46] 2024-09-26 23:30:46,092 [wrapper] apfmon messages muted
[2024-09-26 19:30:46]  *** Error codes and diagnostics ***
[2024-09-26 19:30:46]     "exeErrorCode": 0,
[2024-09-26 19:30:46]     "exeErrorDiag": "",
[2024-09-26 19:30:46]     "pilotErrorCode": 0,
[2024-09-26 19:30:46]     "pilotErrorDiag": "",
[2024-09-26 19:30:46]  *** Listing of results directory ***
[2024-09-26 19:30:46] total 582276
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas    484599 Sep 26 18:36 pilot3.tar.gz
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas      5653 Sep 26 18:40 queuedata.json
[2024-09-26 19:30:46] -rwx------ 1 boincer umatlas     33814 Sep 26 18:40 runpilot2-wrapper.sh
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas       100 Sep 26 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-26 19:30:46] -rwxr-xr-x 1 boincer umatlas      7986 Sep 26 18:41 run_atlas
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas       105 Sep 26 18:41 job.xml
[2024-09-26 19:30:46] -rw-r--r-- 2 boincer umatlas 439622961 Sep 26 18:41 EVNT.41081629._000010.pool.root.1
[2024-09-26 19:30:46] -rw-r--r-- 2 boincer umatlas     17537 Sep 26 18:41 start_atlas.sh
[2024-09-26 19:30:46] drwxrwx--x 2 boincer umatlas      4096 Sep 26 18:41 shared
[2024-09-26 19:30:46] -rw-r--r-- 2 boincer umatlas    498168 Sep 26 18:41 input.tar.gz
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas         0 Sep 26 18:41 boinc_lockfile
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas      2567 Sep 26 18:41 pandaJob.out
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas       424 Sep 26 18:41 setup.sh.local
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas   1013996 Sep 26 18:41 agis_schedconf.cvmfs.json
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas   1618603 Sep 26 18:41 agis_ddmendpoints.agis.ALL.json
[2024-09-26 19:30:46] drwx------ 4 boincer umatlas      4096 Sep 26 18:41 pilot3
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas 151580391 Sep 26 19:30 HITS.41081631._000243.pool.root.1
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas      6299 Sep 26 19:30 init_data.xml
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas       531 Sep 26 19:30 boinc_task_state.xml
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas        95 Sep 26 19:30 pilot_heartbeat.json
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas      1057 Sep 26 19:30 memory_monitor_summary.json
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas    292611 Sep 26 19:30 log.41081631._000243.job.log.tgz.1
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas        27 Sep 26 19:30 wrapper_checkpoint.txt
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas      8192 Sep 26 19:30 boinc_mmap_file
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas      7763 Sep 26 19:30 heartbeat.json
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas      4214 Sep 26 19:30 pilotlog.txt
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas    304957 Sep 26 19:30 log.41081631._000243.job.log.1
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas       357 Sep 26 19:30 output.list
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas       620 Sep 26 19:30 runtime_log
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas    614400 Sep 26 19:30 result.tar.gz
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas     11009 Sep 26 19:30 runtime_log.err
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas       646 Sep 26 19:30 5doKDmoKCE6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmjGmKDm9vb2sn.diag
[2024-09-26 19:30:46] -rw-r--r-- 1 boincer umatlas     21057 Sep 26 19:30 stderr.txt
[2024-09-26 19:30:46] HITS file was successfully produced:
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas 151580391 Sep 26 19:30 shared/HITS.pool.root.1
[2024-09-26 19:30:46]  *** Contents of shared directory: ***
[2024-09-26 19:30:46] total 578460
[2024-09-26 19:30:46] -rw-r--r-- 2 boincer umatlas 439622961 Sep 26 18:41 ATLAS.root_0
[2024-09-26 19:30:46] -rw-r--r-- 2 boincer umatlas     17537 Sep 26 18:41 start_atlas.sh
[2024-09-26 19:30:46] -rw-r--r-- 2 boincer umatlas    498168 Sep 26 18:41 input.tar.gz
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas 151580391 Sep 26 19:30 HITS.pool.root.1
[2024-09-26 19:30:46] -rw------- 1 boincer umatlas    614400 Sep 26 19:30 result.tar.gz
19:30:48 (239885): run_atlas exited; CPU time 16827.149237
19:30:48 (239885): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN