Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:54:12 (3719792): wrapper (7.7.26015): starting
08:54:12 (3719792): wrapper: running run_atlas (--nthreads 8)
[2024-09-26 08:54:12] Arguments: --nthreads 8
[2024-09-26 08:54:12] Threads: 8
[2024-09-26 08:54:12] Checking for CVMFS
[2024-09-26 08:54:13] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-26 08:54:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-26 08:54:13] Running cvmfs_config stat atlas.cern.ch
[2024-09-26 08:54:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-26 08:54:13] 2.11.2.0 1574533 30642 84600 137668 2 187 9557965 18432001 2783 130560 1 97262360 99.986 6029648 15756 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-09-26 08:54:13] CVMFS is ok
[2024-09-26 08:54:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-26 08:54:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-26 08:54:13] Further information can be found at the LHC@home message board.
[2024-09-26 08:54:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-26 08:54:13] Checking for apptainer binary...
[2024-09-26 08:54:13] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-26 08:54:13] Running /usr/bin/apptainer --version
[2024-09-26 08:54:15] apptainer version 1.3.2-1.el7
[2024-09-26 08:54:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-26 08:54:18] gc-7-31.aglt2.org
[2024-09-26 08:54:18] apptainer works
[2024-09-26 08:54:18] Set ATHENA_PROC_NUMBER=8
[2024-09-26 08:54:18] Set ATHENA_CORE_NUMBER=8
[2024-09-26 08:54:18] Starting ATLAS job with PandaID=6347303819
[2024-09-26 08:54:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-26 09:57:35]  *** The last 200 lines of the pilot log: ***
[2024-09-26 09:57:35]  is_tar=False
[2024-09-26 09:57:35]  lfn=log.41079404._000712.job.log.tgz.1
[2024-09-26 09:57:35]  mtime=0
[2024-09-26 09:57:35]  protocol_id=None
[2024-09-26 09:57:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-26 09:57:35]  replicas=None
[2024-09-26 09:57:35]  scope=mc23_13p6TeV
[2024-09-26 09:57:35]  status=None
[2024-09-26 09:57:35]  status_code=0
[2024-09-26 09:57:35]  storage_token=
[2024-09-26 09:57:35]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6347303819/log.41079404._000712.job.log.tgz.1
[2024-09-26 09:57:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/dd/log.41079404._000712.job.log.tgz.1
[2024-09-26 09:57:35]  workdir=None
[2024-09-26 09:57:35] ]
[2024-09-26 09:57:35] 2024-09-26 13:57:09,387 | INFO     | transferring file log.41079404._000712.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6347303819/log.41079404._000712.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-09-26 09:57:35] 2024-09-26 13:57:09,387 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6347303819/log.41079404._000712.job.log.tgz.1 /tmp/boinchome/slots/4/log.41079404._000712.job
[2024-09-26 09:57:35] 2024-09-26 13:57:09,391 | INFO     | monitor loop #293: job 0:6347303819 is in state 'stageout'
[2024-09-26 09:57:35] 2024-09-26 13:57:09,392 | WARNING  | aborting job monitor tasks since payload process 3742175 is not running
[2024-09-26 09:57:35] 2024-09-26 13:57:09,409 | INFO     | adding to output.list: log.41079404._000712.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/dd/log.41079404._000712.job.log.tg
[2024-09-26 09:57:35] 2024-09-26 13:57:09,410 | INFO     | summary of transferred files:
[2024-09-26 09:57:35] 2024-09-26 13:57:09,410 | INFO     |  -- lfn=log.41079404._000712.job.log.tgz.1, status_code=0, status=transferred
[2024-09-26 09:57:35] 2024-09-26 13:57:09,410 | INFO     | stage-out finished correctly
[2024-09-26 09:57:35] 2024-09-26 13:57:09,461 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-26 09:57:35] 2024-09-26 13:57:10,147 | INFO     | job 6347303819 has state=finished
[2024-09-26 09:57:35] 2024-09-26 13:57:10,147 | INFO     | preparing for final server update for job 6347303819 in state='finished'
[2024-09-26 09:57:35] 2024-09-26 13:57:10,147 | INFO     | this job has now completed (state=finished)
[2024-09-26 09:57:35] 2024-09-26 13:57:10,147 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-26 09:57:35] 2024-09-26 13:57:10,148 | INFO     | log transfer has been attempted: DONE
[2024-09-26 09:57:35] 2024-09-26 13:57:10,148 | INFO     | job 6347303819 has finished - writing final server update
[2024-09-26 09:57:35] 2024-09-26 13:57:10,148 | INFO     | total number of processed events: 400 (read)
[2024-09-26 09:57:35] 2024-09-26 13:57:10,150 | INFO     | executing command: lscpu
[2024-09-26 09:57:35] 2024-09-26 13:57:10,196 | INFO     | found 24 cores (12 cores per socket, 2 sockets)
[2024-09-26 09:57:35] 2024-09-26 13:57:10,196 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-26 09:57:35] 2024-09-26 13:57:10,243 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-26 09:57:35] 2024-09-26 13:57:11,895 | INFO     | monitor loop #294: job 0:6347303819 is in state 'finished'
[2024-09-26 09:57:35] 2024-09-26 13:57:11,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-26 09:57:35] 2024-09-26 13:57:14,398 | INFO     | monitor loop #295: job 0:6347303819 is in state 'finished'
[2024-09-26 09:57:35] 2024-09-26 13:57:14,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-26 09:57:35] 2024-09-26 13:57:14,731 | INFO     | CPU arch script returned: x86-64-v4
[2024-09-26 09:57:35] 2024-09-26 13:57:14,732 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6347303819/memory_monitor_summary.json (trf name=prmon)
[2024-09-26 09:57:35] 2024-09-26 13:57:14,733 | INFO     | extracted standard info from prmon json
[2024-09-26 09:57:35] 2024-09-26 13:57:14,733 | INFO     | extracted standard memory fields from prmon json
[2024-09-26 09:57:35] 2024-09-26 13:57:14,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-26 09:57:35] 2024-09-26 13:57:14,734 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-26 09:57:35] 2024-09-26 13:57:14,734 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-26 09:57:35] 2024-09-26 13:57:14,735 | INFO     | fitting pss+swap vs Time
[2024-09-26 09:57:35] 2024-09-26 13:57:14,735 | INFO     | model: linear, x: [1727355600.0, 1727355661.0, 1727355722.0, 1727355783.0, 1727355844.0, 1727355905.0, 1727355966.0, 1727356027.0, 1727356088.0, 1727356149.0, 1727
[2024-09-26 09:57:35] 2024-09-26 13:57:14,735 | INFO     | sum of square deviations: 51573060.0
[2024-09-26 09:57:35] 2024-09-26 13:57:14,736 | INFO     | sum of deviations: 16057727474.0
[2024-09-26 09:57:35] 2024-09-26 13:57:14,736 | INFO     | mean x: 1727357247.0
[2024-09-26 09:57:35] 2024-09-26 13:57:14,736 | INFO     | mean y: 2307479.8363636364
[2024-09-26 09:57:35] 2024-09-26 13:57:14,736 | INFO     | -- intersect: -537825619010.562
[2024-09-26 09:57:35] 2024-09-26 13:57:14,736 | INFO     | intersect: -537825619010.562
[2024-09-26 09:57:35] 2024-09-26 13:57:14,736 | INFO     | chi2: 2.0808263403025906
[2024-09-26 09:57:35] 2024-09-26 13:57:14,736 | INFO     | -- intersect: -537825619010.562
[2024-09-26 09:57:35] 2024-09-26 13:57:14,736 | INFO     | current memory leak: 311.36 B/s (using 55 data points, chi2=2.08)
[2024-09-26 09:57:35] 2024-09-26 13:57:14,736 | INFO     | ..............................
[2024-09-26 09:57:35] 2024-09-26 13:57:14,737 | INFO     | . Timing measurements:
[2024-09-26 09:57:35] 2024-09-26 13:57:14,737 | INFO     | . get job = 0 s
[2024-09-26 09:57:35] 2024-09-26 13:57:14,737 | INFO     | . initial setup = 2 s
[2024-09-26 09:57:35] 2024-09-26 13:57:14,737 | INFO     | . payload setup = 7 s
[2024-09-26 09:57:35] 2024-09-26 13:57:14,737 | INFO     | . stage-in = 0 s
[2024-09-26 09:57:35] 2024-09-26 13:57:14,737 | INFO     | . payload execution = 3734 s
[2024-09-26 09:57:35] 2024-09-26 13:57:14,737 | INFO     | . stage-out = 0 s
[2024-09-26 09:57:35] 2024-09-26 13:57:14,737 | INFO     | . log creation = 0 s
[2024-09-26 09:57:35] 2024-09-26 13:57:14,737 | INFO     | ..............................
[2024-09-26 09:57:35] 2024-09-26 13:57:15,037 | INFO     | 
[2024-09-26 09:57:35] 2024-09-26 13:57:15,037 | INFO     | job summary report
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | --------------------------------------------------
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | PanDA job id: 6347303819
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | task id: 41079404
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | errors: (none)
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | pilot state: finished 
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | transexitcode: 0
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | exeerrorcode: 0
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | exeerrordiag: 
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | exitcode: 0
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | exitmsg: OK
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | cpuconsumptiontime: 22570 s
[2024-09-26 09:57:35] 2024-09-26 13:57:15,038 | INFO     | nevents: 400
[2024-09-26 09:57:35] 2024-09-26 13:57:15,039 | INFO     | neventsw: 0
[2024-09-26 09:57:35] 2024-09-26 13:57:15,039 | INFO     | pid: 3742175
[2024-09-26 09:57:35] 2024-09-26 13:57:15,039 | INFO     | pgrp: 3742175
[2024-09-26 09:57:35] 2024-09-26 13:57:15,039 | INFO     | corecount: 8
[2024-09-26 09:57:35] 2024-09-26 13:57:15,039 | INFO     | event service: False
[2024-09-26 09:57:35] 2024-09-26 13:57:15,039 | INFO     | sizes: {0: 2440311, 5: 2440517, 11: 2440573, 3744: 2466269, 3745: 2475285, 3750: 2475399}
[2024-09-26 09:57:35] 2024-09-26 13:57:15,039 | INFO     | --------------------------------------------------
[2024-09-26 09:57:35] 2024-09-26 13:57:15,039 | INFO     | 
[2024-09-26 09:57:35] 2024-09-26 13:57:15,039 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2024-09-26 09:57:35] 2024-09-26 13:57:15,064 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,064 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,064 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,065 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,066 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-26 09:57:35] 2024-09-26 13:57:15,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,066 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-26 09:57:35] 2024-09-26 13:57:15,067 | INFO     | job 6347303819 has completed (purged errors)
[2024-09-26 09:57:35] 2024-09-26 13:57:15,067 | INFO     | overall cleanup function is called
[2024-09-26 09:57:35] 2024-09-26 13:57:16,075 | INFO     | --- collectZombieJob: --- 10, [3742175]
[2024-09-26 09:57:35] 2024-09-26 13:57:16,076 | INFO     | zombie collector waiting for pid 3742175
[2024-09-26 09:57:35] 2024-09-26 13:57:16,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-26 09:57:35] 2024-09-26 13:57:16,076 | INFO     | collected zombie processes
[2024-09-26 09:57:35] 2024-09-26 13:57:16,076 | INFO     | will  attempt to kill all subprocesses of pid=3742175
[2024-09-26 09:57:35] 2024-09-26 13:57:16,205 | INFO     | process IDs to be killed: [3742175] (in reverse order)
[2024-09-26 09:57:35] 2024-09-26 13:57:16,284 | WARNING  | found no corresponding commands to process id(s)
[2024-09-26 09:57:35] 2024-09-26 13:57:16,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-26 09:57:35] 2024-09-26 13:57:16,295 | INFO     | did not find any defunct processes belonging to 3742175
[2024-09-26 09:57:35] 2024-09-26 13:57:16,300 | INFO     | did not find any defunct processes belonging to 3742175
[2024-09-26 09:57:35] 2024-09-26 13:57:16,300 | INFO     | ready for new job
[2024-09-26 09:57:35] 2024-09-26 13:57:16,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-26 09:57:35] 2024-09-26 13:57:16,301 | INFO     | **************************************
[2024-09-26 09:57:35] 2024-09-26 13:57:16,301 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-26 09:57:35] 2024-09-26 13:57:16,302 | INFO     | **************************************
[2024-09-26 09:57:35] 2024-09-26 13:57:16,302 | INFO     | 
[2024-09-26 09:57:35] 2024-09-26 13:57:16,303 | INFO     | architecture information:
[2024-09-26 09:57:35] 2024-09-26 13:57:16,304 | INFO     | executing command: cat /etc/os-release
[2024-09-26 09:57:35] 2024-09-26 13:57:16,319 | INFO     | cat /etc/os-release:
[2024-09-26 09:57:35] NAME="CentOS Linux"
[2024-09-26 09:57:35] VERSION="7 (Core)"
[2024-09-26 09:57:35] ID="centos"
[2024-09-26 09:57:35] ID_LIKE="rhel fedora"
[2024-09-26 09:57:35] VERSION_ID="7"
[2024-09-26 09:57:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-26 09:57:35] ANSI_COLOR="0;31"
[2024-09-26 09:57:35] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-26 09:57:35] HOME_URL="https://www.centos.org/"
[2024-09-26 09:57:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-26 09:57:35] 
[2024-09-26 09:57:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-26 09:57:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-26 09:57:35] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-26 09:57:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-26 09:57:35] 
[2024-09-26 09:57:35] 2024-09-26 13:57:16,320 | INFO     | **************************************
[2024-09-26 09:57:35] 2024-09-26 13:57:16,823 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2024-09-26 09:57:35] 2024-09-26 13:57:16,845 | INFO     | sufficient remaining disk space (100358160384 B)
[2024-09-26 09:57:35] 2024-09-26 13:57:16,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-26 09:57:35] 2024-09-26 13:57:16,846 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-26 09:57:35] 2024-09-26 13:57:16,846 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-26 09:57:35] 2024-09-26 13:57:16,847 | INFO     | found 0 job(s) in 20 queues
[2024-09-26 09:57:35] 2024-09-26 13:57:16,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-26 09:57:35] 2024-09-26 13:57:16,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-26 09:57:35] 2024-09-26 13:57:16,902 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-09-26 09:57:35] 2024-09-26 13:57:16,902 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-09-26 09:57:35] 2024-09-26 13:57:16,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-26 09:57:35] 2024-09-26 13:57:16,903 | INFO     | will abort loop
[2024-09-26 09:57:35] 2024-09-26 13:57:17,156 | INFO     | all data control threads have been joined
[2024-09-26 09:57:35] 2024-09-26 13:57:17,181 | INFO     | all job control threads have been joined
[2024-09-26 09:57:35] 2024-09-26 13:57:17,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-26 09:57:35] 2024-09-26 13:57:17,851 | INFO     | [job] retrieve thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:17,867 | INFO     | [payload] validate_post thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:17,907 | INFO     | [job] job monitor thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:17,915 | INFO     | [payload] validate_pre thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:17,916 | INFO     | [job] create_data_payload thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:18,161 | INFO     | [data] control thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:18,186 | INFO     | [job] control thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:18,187 | INFO     | [data] copytool_in thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:18,215 | INFO     | all payload control threads have been joined
[2024-09-26 09:57:35] 2024-09-26 13:57:18,406 | INFO     | [payload] failed_post thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:18,797 | INFO     | [payload] execute_payloads thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:19,205 | INFO     | [job] validate thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:19,220 | INFO     | [payload] control thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:19,477 | INFO     | [data] copytool_out thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:19,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-26 09:57:35] 2024-09-26 13:57:20,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-26 09:57:35] 2024-09-26 13:57:20,844 | INFO     | [job] queue monitor thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:24,028 | INFO     | [data] queue_monitor thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:27,757 | INFO     | job.realtimelogging is not enabled
[2024-09-26 09:57:35] 2024-09-26 13:57:28,762 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-26 09:57:35] 2024-09-26 13:57:30,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140155324987200)>', '<ExcThread(monitor, started 140154891126528)>']
[2024-09-26 09:57:35] 2024-09-26 13:57:30,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-26 09:57:35] 2024-09-26 13:57:30,918 | INFO     | [monitor] control thread has ended
[2024-09-26 09:57:35] 2024-09-26 13:57:35,230 | INFO     | all workflow threads have been joined
[2024-09-26 09:57:35] 2024-09-26 13:57:35,231 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-26 09:57:35] 2024-09-26 13:57:35,231 | INFO     | traces error code: 0
[2024-09-26 09:57:35] 2024-09-26 13:57:35,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-26 09:57:35] 2024-09-26 13:57:35,314 [wrapper] ==== pilot stdout END ====
[2024-09-26 09:57:35] 2024-09-26 13:57:35,319 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-26 09:57:35] 2024-09-26 13:57:35,323 [wrapper] pilotpid: 3729423
[2024-09-26 09:57:35] 2024-09-26 13:57:35,327 [wrapper] Pilot exit status: 0
[2024-09-26 09:57:35] 2024-09-26 13:57:35,340 [wrapper] pandaids: 6347303819
[2024-09-26 09:57:35] 2024-09-26 13:57:35,395 [wrapper] cleanup supervisor_pilot 4049860 3729424
[2024-09-26 09:57:35] 2024-09-26 13:57:35,398 [wrapper] Test setup, not cleaning
[2024-09-26 09:57:35] 2024-09-26 13:57:35,401 [wrapper] ==== wrapper stdout END ====
[2024-09-26 09:57:35] 2024-09-26 13:57:35,404 [wrapper] ==== wrapper stderr END ====
[2024-09-26 09:57:35] 2024-09-26 13:57:35,411 [wrapper] apfmon messages muted
[2024-09-26 09:57:35]  *** Error codes and diagnostics ***
[2024-09-26 09:57:35]     "exeErrorCode": 0,
[2024-09-26 09:57:35]     "exeErrorDiag": "",
[2024-09-26 09:57:35]     "pilotErrorCode": 0,
[2024-09-26 09:57:35]     "pilotErrorDiag": "",
[2024-09-26 09:57:35]  *** Listing of results directory ***
[2024-09-26 09:57:35] total 587612
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas    482533 Sep 26 08:04 pilot3.tar.gz
[2024-09-26 09:57:35] -rwx------ 1 boincer umatlas     33814 Sep 26 08:17 runpilot2-wrapper.sh
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas      5653 Sep 26 08:17 queuedata.json
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas       100 Sep 26 08:54 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-26 09:57:35] -rwxr-xr-x 1 boincer umatlas      7986 Sep 26 08:54 run_atlas
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas       105 Sep 26 08:54 job.xml
[2024-09-26 09:57:35] -rw-r--r-- 2 boincer umatlas 439897194 Sep 26 08:54 EVNT.41079402._000021.pool.root.1
[2024-09-26 09:57:35] -rw-r--r-- 2 boincer umatlas     17537 Sep 26 08:54 start_atlas.sh
[2024-09-26 09:57:35] drwxrwx--x 2 boincer umatlas      4096 Sep 26 08:54 shared
[2024-09-26 09:57:35] -rw-r--r-- 2 boincer umatlas    496000 Sep 26 08:54 input.tar.gz
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas         0 Sep 26 08:54 boinc_lockfile
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas      2602 Sep 26 08:54 pandaJob.out
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas       424 Sep 26 08:54 setup.sh.local
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas   1016020 Sep 26 08:54 agis_schedconf.cvmfs.json
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas   1618603 Sep 26 08:54 agis_ddmendpoints.agis.ALL.json
[2024-09-26 09:57:35] drwx------ 4 boincer umatlas      4096 Sep 26 08:54 pilot3
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas      9054 Sep 26 09:54 init_data.xml
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas        95 Sep 26 09:56 pilot_heartbeat.json
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas 156580646 Sep 26 09:56 HITS.41079404._000712.pool.root.1
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas       530 Sep 26 09:57 boinc_task_state.xml
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas      1042 Sep 26 09:57 memory_monitor_summary.json
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas    307938 Sep 26 09:57 log.41079404._000712.job.log.tgz.1
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas      7739 Sep 26 09:57 heartbeat.json
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas      8192 Sep 26 09:57 boinc_mmap_file
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas        27 Sep 26 09:57 wrapper_checkpoint.txt
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas      4597 Sep 26 09:57 pilotlog.txt
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas    374864 Sep 26 09:57 log.41079404._000712.job.log.1
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas       357 Sep 26 09:57 output.list
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas       620 Sep 26 09:57 runtime_log
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas    706560 Sep 26 09:57 result.tar.gz
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas     10994 Sep 26 09:57 runtime_log.err
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas       643 Sep 26 09:57 cpaKDmLc2D6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmB2lKDm0wNHfm.diag
[2024-09-26 09:57:35] -rw-r--r-- 1 boincer umatlas     21534 Sep 26 09:57 stderr.txt
[2024-09-26 09:57:35] HITS file was successfully produced:
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas 156580646 Sep 26 09:56 shared/HITS.pool.root.1
[2024-09-26 09:57:35]  *** Contents of shared directory: ***
[2024-09-26 09:57:35] total 583708
[2024-09-26 09:57:35] -rw-r--r-- 2 boincer umatlas 439897194 Sep 26 08:54 ATLAS.root_0
[2024-09-26 09:57:35] -rw-r--r-- 2 boincer umatlas     17537 Sep 26 08:54 start_atlas.sh
[2024-09-26 09:57:35] -rw-r--r-- 2 boincer umatlas    496000 Sep 26 08:54 input.tar.gz
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas 156580646 Sep 26 09:56 HITS.pool.root.1
[2024-09-26 09:57:35] -rw------- 1 boincer umatlas    706560 Sep 26 09:57 result.tar.gz
09:57:37 (3719792): run_atlas exited; CPU time 22384.999954
09:57:37 (3719792): called boinc_finish(0)

</stderr_txt>
]]>

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