Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
15:25:29 (3772285): wrapper (7.7.26015): starting
15:25:29 (3772285): wrapper: running run_atlas (--nthreads 4)
[2024-09-26 15:25:29] Arguments: --nthreads 4
[2024-09-26 15:25:29] Threads: 4
[2024-09-26 15:25:29] Checking for CVMFS
[2024-09-26 15:25:29] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-26 15:25:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-26 15:25:30] Running cvmfs_config stat atlas.cern.ch
[2024-09-26 15:25:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-26 15:25:30] 2.11.5.0 3428134 196 84096 137676 0 186 2721514 4194304 1778 130560 0 1035501 99.999 6059 186 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-09-26 15:25:30] CVMFS is ok
[2024-09-26 15:25:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-26 15:25:30] Small home clusters do not require a local http proxy but it is suggested if
[2024-09-26 15:25:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-09-26 15:25:30] Further information can be found at the LHC@home message board.
[2024-09-26 15:25:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-26 15:25:30] Checking for apptainer binary...
[2024-09-26 15:25:30] apptainer is not installed, using version from CVMFS
[2024-09-26 15:25:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-26 15:25:30] Ryze
[2024-09-26 15:25:30] apptainer works
[2024-09-26 15:25:30] Set ATHENA_PROC_NUMBER=4
[2024-09-26 15:25:30] Set ATHENA_CORE_NUMBER=4
[2024-09-26 15:25:30] Starting ATLAS job with PandaID=6347242159
[2024-09-26 15:25:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-26 16:28:31]  *** The last 200 lines of the pilot log: ***
[2024-09-26 16:28:31]  filesize=233588
[2024-09-26 16:28:31]  filetype=log
[2024-09-26 16:28:31]  guid=2e2056d4-4c8d-4d60-8b74-9cfe91841df2
[2024-09-26 16:28:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-26 16:28:31]  is_tar=False
[2024-09-26 16:28:31]  lfn=log.41079404._000115.job.log.tgz.1
[2024-09-26 16:28:31]  mtime=0
[2024-09-26 16:28:31]  protocol_id=None
[2024-09-26 16:28:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-26 16:28:31]  replicas=None
[2024-09-26 16:28:31]  scope=mc23_13p6TeV
[2024-09-26 16:28:31]  status=None
[2024-09-26 16:28:31]  status_code=0
[2024-09-26 16:28:31]  storage_token=
[2024-09-26 16:28:31]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6347242159/log.41079404._000115.job.log.tgz.1
[2024-09-26 16:28:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/96/log.41079404._000115.job.log.tgz.1
[2024-09-26 16:28:31]  workdir=None
[2024-09-26 16:28:31] ]
[2024-09-26 16:28:31] 2024-09-26 14:28:12,066 | INFO     | transferring file log.41079404._000115.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6347242159/log.41079404._000115.job.log.tgz.1 to /var/lib/boinc
[2024-09-26 16:28:31] 2024-09-26 14:28:12,066 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6347242159/log.41079404._000115.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.410794
[2024-09-26 16:28:31] 2024-09-26 14:28:12,080 | INFO     | adding to output.list: log.41079404._000115.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/96/log.41079404._000115.job.log.tg
[2024-09-26 16:28:31] 2024-09-26 14:28:12,080 | INFO     | summary of transferred files:
[2024-09-26 16:28:31] 2024-09-26 14:28:12,080 | INFO     |  -- lfn=log.41079404._000115.job.log.tgz.1, status_code=0, status=transferred
[2024-09-26 16:28:31] 2024-09-26 14:28:12,081 | INFO     | stage-out finished correctly
[2024-09-26 16:28:31] 2024-09-26 14:28:12,998 | WARNING  | process 3782639 is no longer using CPU - aborting
[2024-09-26 16:28:31] 2024-09-26 14:28:14,209 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-26 16:28:31] 2024-09-26 14:28:15,502 | INFO     | monitor loop #300: job 0:6347242159 is in state 'finished'
[2024-09-26 16:28:31] 2024-09-26 14:28:15,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-26 16:28:31] 2024-09-26 14:28:15,974 | INFO     | job 6347242159 has state=finished
[2024-09-26 16:28:31] 2024-09-26 14:28:15,975 | INFO     | preparing for final server update for job 6347242159 in state='finished'
[2024-09-26 16:28:31] 2024-09-26 14:28:16,716 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-09-26 16:28:31] 2024-09-26 14:28:16,716 | INFO     | this job has now completed (state=finished)
[2024-09-26 16:28:31] 2024-09-26 14:28:16,716 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-26 16:28:31] 2024-09-26 14:28:16,716 | INFO     | log transfer has been attempted: DONE
[2024-09-26 16:28:31] 2024-09-26 14:28:16,717 | INFO     | job 6347242159 has finished - writing final server update
[2024-09-26 16:28:31] 2024-09-26 14:28:16,717 | INFO     | total number of processed events: 400 (read)
[2024-09-26 16:28:31] 2024-09-26 14:28:16,738 | INFO     | executing command: lscpu
[2024-09-26 16:28:31] 2024-09-26 14:28:16,785 | INFO     | found 12 cores (12 cores per socket, 1 sockets)
[2024-09-26 16:28:31] 2024-09-26 14:28:16,785 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-26 16:28:31] 2024-09-26 14:28:16,830 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-26 16:28:31] 2024-09-26 14:28:18,005 | INFO     | monitor loop #301: job 0:6347242159 is in state 'finished'
[2024-09-26 16:28:31] 2024-09-26 14:28:18,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-26 16:28:31] 2024-09-26 14:28:19,481 | INFO     | CPU arch script returned: x86-64-v3
[2024-09-26 16:28:31] 2024-09-26 14:28:19,481 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6347242159/memory_monitor_summary.json (trf name=prmon)
[2024-09-26 16:28:31] 2024-09-26 14:28:19,482 | INFO     | extracted standard info from prmon json
[2024-09-26 16:28:31] 2024-09-26 14:28:19,482 | INFO     | extracted standard memory fields from prmon json
[2024-09-26 16:28:31] 2024-09-26 14:28:19,482 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-26 16:28:31] 2024-09-26 14:28:19,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-26 16:28:31] 2024-09-26 14:28:19,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-26 16:28:31] 2024-09-26 14:28:19,484 | INFO     | fitting pss+swap vs Time
[2024-09-26 16:28:31] 2024-09-26 14:28:19,484 | INFO     | model: linear, x: [1727357463.0, 1727357524.0, 1727357585.0, 1727357646.0, 1727357707.0, 1727357768.0, 1727357829.0, 1727357890.0, 1727357951.0, 1727358012.0, 1727
[2024-09-26 16:28:31] 2024-09-26 14:28:19,484 | INFO     | sum of square deviations: 51573060.0
[2024-09-26 16:28:31] 2024-09-26 14:28:19,484 | INFO     | sum of deviations: 11277745026.0
[2024-09-26 16:28:31] 2024-09-26 14:28:19,484 | INFO     | mean x: 1727359110.0
[2024-09-26 16:28:31] 2024-09-26 14:28:19,484 | INFO     | mean y: 2353441.2363636363
[2024-09-26 16:28:31] 2024-09-26 14:28:19,484 | INFO     | -- intersect: -377728105269.5379
[2024-09-26 16:28:31] 2024-09-26 14:28:19,484 | INFO     | intersect: -377728105269.5379
[2024-09-26 16:28:31] 2024-09-26 14:28:19,485 | INFO     | chi2: 1.5046098011939535
[2024-09-26 16:28:31] 2024-09-26 14:28:19,485 | INFO     | -- intersect: -377728105269.5379
[2024-09-26 16:28:31] 2024-09-26 14:28:19,485 | INFO     | current memory leak: 218.68 B/s (using 55 data points, chi2=1.50)
[2024-09-26 16:28:31] 2024-09-26 14:28:19,485 | INFO     | ..............................
[2024-09-26 16:28:31] 2024-09-26 14:28:19,485 | INFO     | . Timing measurements:
[2024-09-26 16:28:31] 2024-09-26 14:28:19,485 | INFO     | . get job = 0 s
[2024-09-26 16:28:31] 2024-09-26 14:28:19,485 | INFO     | . initial setup = 1 s
[2024-09-26 16:28:31] 2024-09-26 14:28:19,485 | INFO     | . payload setup = 3 s
[2024-09-26 16:28:31] 2024-09-26 14:28:19,485 | INFO     | . stage-in = 0 s
[2024-09-26 16:28:31] 2024-09-26 14:28:19,485 | INFO     | . payload execution = 3732 s
[2024-09-26 16:28:31] 2024-09-26 14:28:19,485 | INFO     | . stage-out = 0 s
[2024-09-26 16:28:31] 2024-09-26 14:28:19,486 | INFO     | . log creation = 0 s
[2024-09-26 16:28:31] 2024-09-26 14:28:19,486 | INFO     | ..............................
[2024-09-26 16:28:31] 2024-09-26 14:28:19,530 | INFO     | 
[2024-09-26 16:28:31] 2024-09-26 14:28:19,530 | INFO     | job summary report
[2024-09-26 16:28:31] 2024-09-26 14:28:19,530 | INFO     | --------------------------------------------------
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | PanDA job id: 6347242159
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | task id: 41079404
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | errors: (none)
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | pilot state: finished 
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | transexitcode: 0
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | exeerrorcode: 0
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | exeerrordiag: 
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | exitcode: 0
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | exitmsg: OK
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | cpuconsumptiontime: 12186 s
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | nevents: 400
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | neventsw: 0
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | pid: 3782639
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | pgrp: 3782639
[2024-09-26 16:28:31] 2024-09-26 14:28:19,531 | INFO     | corecount: 4
[2024-09-26 16:28:31] 2024-09-26 14:28:19,532 | INFO     | event service: False
[2024-09-26 16:28:31] 2024-09-26 14:28:19,532 | INFO     | sizes: {0: 2440267, 4: 2440473, 11: 2440501, 3739: 2466221, 3740: 2466220, 3741: 2475250, 3743: 2475434, 3748: 2475604}
[2024-09-26 16:28:31] 2024-09-26 14:28:19,532 | INFO     | --------------------------------------------------
[2024-09-26 16:28:31] 2024-09-26 14:28:19,532 | INFO     | 
[2024-09-26 16:28:31] 2024-09-26 14:28:19,532 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2024-09-26 16:28:31] 2024-09-26 14:28:19,546 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,546 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,546 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,546 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-26 16:28:31] 2024-09-26 14:28:19,547 | INFO     | job 6347242159 has completed (purged errors)
[2024-09-26 16:28:31] 2024-09-26 14:28:19,548 | INFO     | overall cleanup function is called
[2024-09-26 16:28:31] 2024-09-26 14:28:20,555 | INFO     | --- collectZombieJob: --- 10, [3782639]
[2024-09-26 16:28:31] 2024-09-26 14:28:20,555 | INFO     | zombie collector waiting for pid 3782639
[2024-09-26 16:28:31] 2024-09-26 14:28:20,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-26 16:28:31] 2024-09-26 14:28:20,556 | INFO     | collected zombie processes
[2024-09-26 16:28:31] 2024-09-26 14:28:20,556 | INFO     | will  attempt to kill all subprocesses of pid=3782639
[2024-09-26 16:28:31] 2024-09-26 14:28:20,598 | INFO     | process IDs to be killed: [3782639] (in reverse order)
[2024-09-26 16:28:31] 2024-09-26 14:28:20,640 | WARNING  | found no corresponding commands to process id(s)
[2024-09-26 16:28:31] 2024-09-26 14:28:20,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-26 16:28:31] 2024-09-26 14:28:20,644 | INFO     | did not find any defunct processes belonging to 3782639
[2024-09-26 16:28:31] 2024-09-26 14:28:20,646 | INFO     | did not find any defunct processes belonging to 3782639
[2024-09-26 16:28:31] 2024-09-26 14:28:20,647 | INFO     | ready for new job
[2024-09-26 16:28:31] 2024-09-26 14:28:20,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-26 16:28:31] 2024-09-26 14:28:20,648 | INFO     | **************************************
[2024-09-26 16:28:31] 2024-09-26 14:28:20,648 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-26 16:28:31] 2024-09-26 14:28:20,648 | INFO     | **************************************
[2024-09-26 16:28:31] 2024-09-26 14:28:20,648 | INFO     | 
[2024-09-26 16:28:31] 2024-09-26 14:28:20,669 | INFO     | architecture information:
[2024-09-26 16:28:31] 2024-09-26 14:28:20,669 | INFO     | executing command: cat /etc/os-release
[2024-09-26 16:28:31] 2024-09-26 14:28:20,683 | INFO     | cat /etc/os-release:
[2024-09-26 16:28:31] NAME="CentOS Linux"
[2024-09-26 16:28:31] VERSION="7 (Core)"
[2024-09-26 16:28:31] ID="centos"
[2024-09-26 16:28:31] ID_LIKE="rhel fedora"
[2024-09-26 16:28:31] VERSION_ID="7"
[2024-09-26 16:28:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-26 16:28:31] ANSI_COLOR="0;31"
[2024-09-26 16:28:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-26 16:28:31] HOME_URL="https://www.centos.org/"
[2024-09-26 16:28:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-26 16:28:31] 
[2024-09-26 16:28:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-26 16:28:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-26 16:28:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-26 16:28:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-26 16:28:31] 
[2024-09-26 16:28:31] 2024-09-26 14:28:20,683 | INFO     | **************************************
[2024-09-26 16:28:31] 2024-09-26 14:28:21,186 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2024-09-26 16:28:31] 2024-09-26 14:28:21,204 | INFO     | sufficient remaining disk space (198474465280 B)
[2024-09-26 16:28:31] 2024-09-26 14:28:21,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-26 16:28:31] 2024-09-26 14:28:21,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-26 16:28:31] 2024-09-26 14:28:21,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-26 16:28:31] 2024-09-26 14:28:21,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-26 16:28:31] 2024-09-26 14:28:21,511 | INFO     | all job control threads have been joined
[2024-09-26 16:28:31] 2024-09-26 14:28:21,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-26 16:28:31] 2024-09-26 14:28:21,513 | INFO     | aborting loop
[2024-09-26 16:28:31] 2024-09-26 14:28:21,735 | INFO     | all payload control threads have been joined
[2024-09-26 16:28:31] 2024-09-26 14:28:22,205 | INFO     | found 0 job(s) in 20 queues
[2024-09-26 16:28:31] 2024-09-26 14:28:22,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-26 16:28:31] 2024-09-26 14:28:22,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-26 16:28:31] 2024-09-26 14:28:22,209 | INFO     | [job] retrieve thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:22,209 | INFO     | [job] queue monitor thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:22,216 | INFO     | all data control threads have been joined
[2024-09-26 16:28:31] 2024-09-26 14:28:22,440 | INFO     | [data] copytool_in thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:22,516 | INFO     | [job] control thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:22,519 | INFO     | [job] job monitor thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:22,598 | INFO     | [payload] failed_post thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:22,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-26 16:28:31] 2024-09-26 14:28:22,741 | INFO     | [payload] control thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:23,063 | INFO     | [payload] validate_post thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:23,085 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:23,221 | INFO     | [data] control thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:23,395 | INFO     | [job] validate thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:23,396 | INFO     | [job] create_data_payload thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:23,588 | INFO     | [payload] execute_payloads thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:23,623 | INFO     | [payload] validate_pre thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:24,644 | INFO     | [data] copytool_out thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:25,210 | INFO     | [data] queue_monitor thread has finished
[2024-09-26 16:28:31] 2024-09-26 14:28:26,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140696474294080)>', '<ExcThread(monitor, started 140695746639616)>']
[2024-09-26 16:28:31] 2024-09-26 14:28:26,225 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-26 16:28:31] 2024-09-26 14:28:26,225 | INFO     | [monitor] control thread has ended
[2024-09-26 16:28:31] 2024-09-26 14:28:31,066 | INFO     | all workflow threads have been joined
[2024-09-26 16:28:31] 2024-09-26 14:28:31,067 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-26 16:28:31] 2024-09-26 14:28:31,067 | INFO     | traces error code: 0
[2024-09-26 16:28:31] 2024-09-26 14:28:31,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-26 16:28:31] 2024-09-26 14:28:31,117 [wrapper] ==== pilot stdout END ====
[2024-09-26 16:28:31] 2024-09-26 14:28:31,120 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-26 16:28:31] 2024-09-26 14:28:31,122 [wrapper] pilotpid: 3776041
[2024-09-26 16:28:31] 2024-09-26 14:28:31,124 [wrapper] Pilot exit status: 0
[2024-09-26 16:28:31] 2024-09-26 14:28:31,133 [wrapper] pandaids: 6347242159
[2024-09-26 16:28:31] 2024-09-26 14:28:31,157 [wrapper] cleanup supervisor_pilot 3823142 3776042
[2024-09-26 16:28:31] 2024-09-26 14:28:31,159 [wrapper] Test setup, not cleaning
[2024-09-26 16:28:31] 2024-09-26 14:28:31,161 [wrapper] ==== wrapper stdout END ====
[2024-09-26 16:28:31] 2024-09-26 14:28:31,163 [wrapper] ==== wrapper stderr END ====
[2024-09-26 16:28:31] 2024-09-26 14:28:31,166 [wrapper] apfmon messages muted
[2024-09-26 16:28:31]  *** Error codes and diagnostics ***
[2024-09-26 16:28:31]     "exeErrorCode": 0,
[2024-09-26 16:28:31]     "exeErrorDiag": "",
[2024-09-26 16:28:31]     "pilotErrorCode": 0,
[2024-09-26 16:28:31]     "pilotErrorDiag": "",
[2024-09-26 16:28:31]  *** Listing of results directory ***
[2024-09-26 16:28:31] insgesamt 587848
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc    482533 Sep 26 13:09 pilot3.tar.gz
[2024-09-26 16:28:31] -rwx------ 1 boinc boinc     33814 Sep 26 13:27 runpilot2-wrapper.sh
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc      5653 Sep 26 13:27 queuedata.json
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc       100 Sep 26 15:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-26 16:28:31] -rwxr-xr-x 1 boinc boinc      7986 Sep 26 15:25 run_atlas
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc       105 Sep 26 15:25 job.xml
[2024-09-26 16:28:31] -rw-r--r-- 2 boinc boinc 442264894 Sep 26 15:25 EVNT.41079402._000015.pool.root.1
[2024-09-26 16:28:31] -rw-r--r-- 2 boinc boinc     17537 Sep 26 15:25 start_atlas.sh
[2024-09-26 16:28:31] drwxrwx--x 2 boinc boinc      4096 Sep 26 15:25 shared
[2024-09-26 16:28:31] -rw-r--r-- 2 boinc boinc    495998 Sep 26 15:25 input.tar.gz
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc      9127 Sep 26 15:25 init_data.xml
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc         0 Sep 26 15:25 boinc_lockfile
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc      2602 Sep 26 15:25 pandaJob.out
[2024-09-26 16:28:31] -rw------- 1 boinc boinc       424 Sep 26 15:25 setup.sh.local
[2024-09-26 16:28:31] -rw------- 1 boinc boinc   1015769 Sep 26 15:25 agis_schedconf.cvmfs.json
[2024-09-26 16:28:31] -rw------- 1 boinc boinc   1618603 Sep 26 15:25 agis_ddmendpoints.agis.ALL.json
[2024-09-26 16:28:31] drwx------ 4 boinc boinc      4096 Sep 26 15:25 pilot3
[2024-09-26 16:28:31] -rw------- 1 boinc boinc        95 Sep 26 16:27 pilot_heartbeat.json
[2024-09-26 16:28:31] -rw------- 1 boinc boinc 154591799 Sep 26 16:27 HITS.41079404._000115.pool.root.1
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc       530 Sep 26 16:27 boinc_task_state.xml
[2024-09-26 16:28:31] -rw------- 1 boinc boinc      1015 Sep 26 16:28 memory_monitor_summary.json
[2024-09-26 16:28:31] -rw------- 1 boinc boinc    233588 Sep 26 16:28 log.41079404._000115.job.log.tgz.1
[2024-09-26 16:28:31] -rw------- 1 boinc boinc      7636 Sep 26 16:28 heartbeat.json
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc      8192 Sep 26 16:28 boinc_mmap_file
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc        27 Sep 26 16:28 wrapper_checkpoint.txt
[2024-09-26 16:28:31] -rw------- 1 boinc boinc      4223 Sep 26 16:28 pilotlog.txt
[2024-09-26 16:28:31] -rw------- 1 boinc boinc    386434 Sep 26 16:28 log.41079404._000115.job.log.1
[2024-09-26 16:28:31] -rw------- 1 boinc boinc       357 Sep 26 16:28 output.list
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc       620 Sep 26 16:28 runtime_log
[2024-09-26 16:28:31] -rw------- 1 boinc boinc    634880 Sep 26 16:28 result.tar.gz
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc     11055 Sep 26 16:28 runtime_log.err
[2024-09-26 16:28:31] -rw------- 1 boinc boinc       623 Sep 26 16:28 5IYKDmvp1D6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmWtlKDmW66ICn.diag
[2024-09-26 16:28:31] -rw-r--r-- 1 boinc boinc     21395 Sep 26 16:28 stderr.txt
[2024-09-26 16:28:31] HITS file was successfully produced:
[2024-09-26 16:28:31] -rw------- 1 boinc boinc 154591799 Sep 26 16:27 shared/HITS.pool.root.1
[2024-09-26 16:28:31]  *** Contents of shared directory: ***
[2024-09-26 16:28:31] insgesamt 584008
[2024-09-26 16:28:31] -rw-r--r-- 2 boinc boinc 442264894 Sep 26 15:25 ATLAS.root_0
[2024-09-26 16:28:31] -rw-r--r-- 2 boinc boinc     17537 Sep 26 15:25 start_atlas.sh
[2024-09-26 16:28:31] -rw-r--r-- 2 boinc boinc    495998 Sep 26 15:25 input.tar.gz
[2024-09-26 16:28:31] -rw------- 1 boinc boinc 154591799 Sep 26 16:27 HITS.pool.root.1
[2024-09-26 16:28:31] -rw------- 1 boinc boinc    634880 Sep 26 16:28 result.tar.gz
16:28:32 (3772285): run_atlas exited; CPU time 12161.176096
16:28:32 (3772285): called boinc_finish(0)

</stderr_txt>
]]>

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