Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:13:05 (3178822): wrapper (7.7.26015): starting
07:13:05 (3178822): wrapper: running run_atlas (--nthreads 8)
[2024-09-26 07:13:05] Arguments: --nthreads 8
[2024-09-26 07:13:05] Threads: 8
[2024-09-26 07:13:05] Checking for CVMFS
[2024-09-26 07:13:05] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-26 07:13:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-26 07:13:06] Running cvmfs_config stat atlas.cern.ch
[2024-09-26 07:13:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-26 07:13:06] 2.11.2.0 1574533 30541 84928 137668 3 187 9491548 18432000 1835 130560 1 96434955 99.986 6029629 15756 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-09-26 07:13:06] CVMFS is ok
[2024-09-26 07:13:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-26 07:13:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-26 07:13:06] Further information can be found at the LHC@home message board.
[2024-09-26 07:13:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-26 07:13:06] Checking for apptainer binary...
[2024-09-26 07:13:06] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-26 07:13:06] Running /usr/bin/apptainer --version
[2024-09-26 07:13:06] apptainer version 1.3.2-1.el7
[2024-09-26 07:13:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-26 07:13:07] gc-7-31.aglt2.org
[2024-09-26 07:13:07] apptainer works
[2024-09-26 07:13:07] Set ATHENA_PROC_NUMBER=8
[2024-09-26 07:13:07] Set ATHENA_CORE_NUMBER=8
[2024-09-26 07:13:07] Starting ATLAS job with PandaID=6347217892
[2024-09-26 07:13:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-26 08:16:59]  *** The last 200 lines of the pilot log: ***
[2024-09-26 08:16:59]  filesize=294637
[2024-09-26 08:16:59]  filetype=log
[2024-09-26 08:16:59]  guid=70072ca7-8c5a-4d47-80c7-da377ba316c1
[2024-09-26 08:16:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-26 08:16:59]  is_tar=False
[2024-09-26 08:16:59]  lfn=log.41081690._000845.job.log.tgz.1
[2024-09-26 08:16:59]  mtime=0
[2024-09-26 08:16:59]  protocol_id=None
[2024-09-26 08:16:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-26 08:16:59]  replicas=None
[2024-09-26 08:16:59]  scope=mc23_13p6TeV
[2024-09-26 08:16:59]  status=None
[2024-09-26 08:16:59]  status_code=0
[2024-09-26 08:16:59]  storage_token=
[2024-09-26 08:16:59]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6347217892/log.41081690._000845.job.log.tgz.1
[2024-09-26 08:16:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/bb/log.41081690._000845.job.log.tgz.1
[2024-09-26 08:16:59]  workdir=None
[2024-09-26 08:16:59] ]
[2024-09-26 08:16:59] 2024-09-26 12:16:37,098 | INFO     | transferring file log.41081690._000845.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6347217892/log.41081690._000845.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-09-26 08:16:59] 2024-09-26 12:16:37,098 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6347217892/log.41081690._000845.job.log.tgz.1 /tmp/boinchome/slots/2/log.41081690._000845.job
[2024-09-26 08:16:59] 2024-09-26 12:16:37,123 | INFO     | adding to output.list: log.41081690._000845.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/bb/log.41081690._000845.job.log.tg
[2024-09-26 08:16:59] 2024-09-26 12:16:37,124 | INFO     | summary of transferred files:
[2024-09-26 08:16:59] 2024-09-26 12:16:37,124 | INFO     |  -- lfn=log.41081690._000845.job.log.tgz.1, status_code=0, status=transferred
[2024-09-26 08:16:59] 2024-09-26 12:16:37,124 | INFO     | stage-out finished correctly
[2024-09-26 08:16:59] 2024-09-26 12:16:37,473 | WARNING  | process 3217063 is no longer using CPU - aborting
[2024-09-26 08:16:59] 2024-09-26 12:16:37,536 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-26 08:16:59] 2024-09-26 12:16:39,482 | INFO     | job 6347217892 has state=finished
[2024-09-26 08:16:59] 2024-09-26 12:16:39,482 | INFO     | preparing for final server update for job 6347217892 in state='finished'
[2024-09-26 08:16:59] 2024-09-26 12:16:39,483 | INFO     | this job has now completed (state=finished)
[2024-09-26 08:16:59] 2024-09-26 12:16:39,483 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-26 08:16:59] 2024-09-26 12:16:39,483 | INFO     | log transfer has been attempted: DONE
[2024-09-26 08:16:59] 2024-09-26 12:16:39,484 | INFO     | job 6347217892 has finished - writing final server update
[2024-09-26 08:16:59] 2024-09-26 12:16:39,484 | INFO     | total number of processed events: 400 (read)
[2024-09-26 08:16:59] 2024-09-26 12:16:39,489 | INFO     | executing command: lscpu
[2024-09-26 08:16:59] 2024-09-26 12:16:39,534 | INFO     | found 24 cores (12 cores per socket, 2 sockets)
[2024-09-26 08:16:59] 2024-09-26 12:16:39,535 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-26 08:16:59] 2024-09-26 12:16:39,588 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-26 08:16:59] 2024-09-26 12:16:39,977 | INFO     | monitor loop #294: job 0:6347217892 is in state 'finished'
[2024-09-26 08:16:59] 2024-09-26 12:16:39,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-26 08:16:59] 2024-09-26 12:16:42,480 | INFO     | monitor loop #295: job 0:6347217892 is in state 'finished'
[2024-09-26 08:16:59] 2024-09-26 12:16:42,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-26 08:16:59] 2024-09-26 12:16:44,215 | INFO     | CPU arch script returned: x86-64-v4
[2024-09-26 08:16:59] 2024-09-26 12:16:44,215 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6347217892/memory_monitor_summary.json (trf name=prmon)
[2024-09-26 08:16:59] 2024-09-26 12:16:44,217 | INFO     | extracted standard info from prmon json
[2024-09-26 08:16:59] 2024-09-26 12:16:44,217 | INFO     | extracted standard memory fields from prmon json
[2024-09-26 08:16:59] 2024-09-26 12:16:44,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-26 08:16:59] 2024-09-26 12:16:44,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-26 08:16:59] 2024-09-26 12:16:44,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-26 08:16:59] 2024-09-26 12:16:44,220 | INFO     | fitting pss+swap vs Time
[2024-09-26 08:16:59] 2024-09-26 12:16:44,220 | INFO     | model: linear, x: [1727349535.0, 1727349596.0, 1727349657.0, 1727349718.0, 1727349779.0, 1727349840.0, 1727349901.0, 1727349962.0, 1727350023.0, 1727350084.0, 1727
[2024-09-26 08:16:59] 2024-09-26 12:16:44,221 | INFO     | sum of square deviations: 51573060.0
[2024-09-26 08:16:59] 2024-09-26 12:16:44,221 | INFO     | sum of deviations: 15945786678.999996
[2024-09-26 08:16:59] 2024-09-26 12:16:44,221 | INFO     | mean x: 1727351182.0
[2024-09-26 08:16:59] 2024-09-26 12:16:44,221 | INFO     | mean y: 2358827.672727273
[2024-09-26 08:16:59] 2024-09-26 12:16:44,221 | INFO     | -- intersect: -534074414353.7227
[2024-09-26 08:16:59] 2024-09-26 12:16:44,221 | INFO     | intersect: -534074414353.7227
[2024-09-26 08:16:59] 2024-09-26 12:16:44,222 | INFO     | chi2: 1.9741959542917853
[2024-09-26 08:16:59] 2024-09-26 12:16:44,222 | INFO     | -- intersect: -534074414353.7227
[2024-09-26 08:16:59] 2024-09-26 12:16:44,222 | INFO     | current memory leak: 309.19 B/s (using 55 data points, chi2=1.97)
[2024-09-26 08:16:59] 2024-09-26 12:16:44,222 | INFO     | ..............................
[2024-09-26 08:16:59] 2024-09-26 12:16:44,222 | INFO     | . Timing measurements:
[2024-09-26 08:16:59] 2024-09-26 12:16:44,222 | INFO     | . get job = 0 s
[2024-09-26 08:16:59] 2024-09-26 12:16:44,223 | INFO     | . initial setup = 2 s
[2024-09-26 08:16:59] 2024-09-26 12:16:44,223 | INFO     | . payload setup = 7 s
[2024-09-26 08:16:59] 2024-09-26 12:16:44,223 | INFO     | . stage-in = 0 s
[2024-09-26 08:16:59] 2024-09-26 12:16:44,223 | INFO     | . payload execution = 3767 s
[2024-09-26 08:16:59] 2024-09-26 12:16:44,223 | INFO     | . stage-out = 0 s
[2024-09-26 08:16:59] 2024-09-26 12:16:44,223 | INFO     | . log creation = 0 s
[2024-09-26 08:16:59] 2024-09-26 12:16:44,223 | INFO     | ..............................
[2024-09-26 08:16:59] 2024-09-26 12:16:44,555 | INFO     | 
[2024-09-26 08:16:59] 2024-09-26 12:16:44,555 | INFO     | job summary report
[2024-09-26 08:16:59] 2024-09-26 12:16:44,555 | INFO     | --------------------------------------------------
[2024-09-26 08:16:59] 2024-09-26 12:16:44,555 | INFO     | PanDA job id: 6347217892
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | task id: 41081690
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | errors: (none)
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | pilot state: finished 
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | transexitcode: 0
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | exeerrorcode: 0
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | exeerrordiag: 
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | exitcode: 0
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | exitmsg: OK
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | cpuconsumptiontime: 23047 s
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | nevents: 400
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | neventsw: 0
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | pid: 3217063
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | pgrp: 3217063
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | corecount: 8
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | event service: False
[2024-09-26 08:16:59] 2024-09-26 12:16:44,556 | INFO     | sizes: {0: 2440268, 5: 2440474, 11: 2440530, 3778: 2466226, 3780: 2475242, 3787: 2475356}
[2024-09-26 08:16:59] 2024-09-26 12:16:44,557 | INFO     | --------------------------------------------------
[2024-09-26 08:16:59] 2024-09-26 12:16:44,557 | INFO     | 
[2024-09-26 08:16:59] 2024-09-26 12:16:44,557 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-09-26 08:16:59] 2024-09-26 12:16:44,582 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,582 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,583 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,583 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,584 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-26 08:16:59] 2024-09-26 12:16:44,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,584 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-26 08:16:59] 2024-09-26 12:16:44,585 | INFO     | job 6347217892 has completed (purged errors)
[2024-09-26 08:16:59] 2024-09-26 12:16:44,585 | INFO     | overall cleanup function is called
[2024-09-26 08:16:59] 2024-09-26 12:16:45,589 | INFO     | --- collectZombieJob: --- 10, [3217063]
[2024-09-26 08:16:59] 2024-09-26 12:16:45,589 | INFO     | zombie collector waiting for pid 3217063
[2024-09-26 08:16:59] 2024-09-26 12:16:45,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-26 08:16:59] 2024-09-26 12:16:45,590 | INFO     | collected zombie processes
[2024-09-26 08:16:59] 2024-09-26 12:16:45,590 | INFO     | will  attempt to kill all subprocesses of pid=3217063
[2024-09-26 08:16:59] 2024-09-26 12:16:45,722 | INFO     | process IDs to be killed: [3217063] (in reverse order)
[2024-09-26 08:16:59] 2024-09-26 12:16:45,800 | WARNING  | found no corresponding commands to process id(s)
[2024-09-26 08:16:59] 2024-09-26 12:16:45,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-26 08:16:59] 2024-09-26 12:16:45,809 | INFO     | did not find any defunct processes belonging to 3217063
[2024-09-26 08:16:59] 2024-09-26 12:16:45,816 | INFO     | did not find any defunct processes belonging to 3217063
[2024-09-26 08:16:59] 2024-09-26 12:16:45,816 | INFO     | ready for new job
[2024-09-26 08:16:59] 2024-09-26 12:16:45,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-26 08:16:59] 2024-09-26 12:16:45,817 | INFO     | **************************************
[2024-09-26 08:16:59] 2024-09-26 12:16:45,817 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-26 08:16:59] 2024-09-26 12:16:45,817 | INFO     | **************************************
[2024-09-26 08:16:59] 2024-09-26 12:16:45,817 | INFO     | 
[2024-09-26 08:16:59] 2024-09-26 12:16:45,819 | INFO     | architecture information:
[2024-09-26 08:16:59] 2024-09-26 12:16:45,819 | INFO     | executing command: cat /etc/os-release
[2024-09-26 08:16:59] 2024-09-26 12:16:45,838 | INFO     | cat /etc/os-release:
[2024-09-26 08:16:59] NAME="CentOS Linux"
[2024-09-26 08:16:59] VERSION="7 (Core)"
[2024-09-26 08:16:59] ID="centos"
[2024-09-26 08:16:59] ID_LIKE="rhel fedora"
[2024-09-26 08:16:59] VERSION_ID="7"
[2024-09-26 08:16:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-26 08:16:59] ANSI_COLOR="0;31"
[2024-09-26 08:16:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-26 08:16:59] HOME_URL="https://www.centos.org/"
[2024-09-26 08:16:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-26 08:16:59] 
[2024-09-26 08:16:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-26 08:16:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-26 08:16:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-26 08:16:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-26 08:16:59] 
[2024-09-26 08:16:59] 2024-09-26 12:16:45,839 | INFO     | **************************************
[2024-09-26 08:16:59] 2024-09-26 12:16:46,341 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-09-26 08:16:59] 2024-09-26 12:16:46,365 | INFO     | sufficient remaining disk space (100256448512 B)
[2024-09-26 08:16:59] 2024-09-26 12:16:46,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-26 08:16:59] 2024-09-26 12:16:46,366 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-26 08:16:59] 2024-09-26 12:16:46,366 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-26 08:16:59] 2024-09-26 12:16:46,367 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-26 08:16:59] 2024-09-26 12:16:46,367 | INFO     | aborting loop
[2024-09-26 08:16:59] 2024-09-26 12:16:46,367 | INFO     | found 0 job(s) in 20 queues
[2024-09-26 08:16:59] 2024-09-26 12:16:46,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-26 08:16:59] 2024-09-26 12:16:46,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-26 08:16:59] 2024-09-26 12:16:46,510 | INFO     | all payload control threads have been joined
[2024-09-26 08:16:59] 2024-09-26 12:16:46,794 | INFO     | all data control threads have been joined
[2024-09-26 08:16:59] 2024-09-26 12:16:47,296 | INFO     | all job control threads have been joined
[2024-09-26 08:16:59] 2024-09-26 12:16:47,370 | INFO     | [job] retrieve thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:47,373 | INFO     | [job] job monitor thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:47,510 | INFO     | [payload] control thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:47,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-26 08:16:59] 2024-09-26 12:16:47,695 | INFO     | [payload] validate_post thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:47,728 | INFO     | [data] copytool_in thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:47,798 | INFO     | [data] control thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:48,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-26 08:16:59] 2024-09-26 12:16:48,255 | INFO     | [job] validate thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:48,298 | INFO     | [job] control thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:48,432 | INFO     | [payload] execute_payloads thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:48,576 | INFO     | [job] create_data_payload thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:48,587 | INFO     | [payload] failed_post thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:48,660 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:48,668 | INFO     | [payload] validate_pre thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:49,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-26 08:16:59] 2024-09-26 12:16:49,688 | INFO     | [data] copytool_out thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:50,287 | INFO     | [job] queue monitor thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:52,130 | INFO     | [data] queue_monitor thread has finished
[2024-09-26 08:16:59] 2024-09-26 12:16:54,134 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140242480752448)>', '<ExcThread(monitor, started 140241738389248)>']
[2024-09-26 08:16:59] 2024-09-26 12:16:54,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-26 08:16:59] 2024-09-26 12:16:54,403 | INFO     | [monitor] control thread has ended
[2024-09-26 08:16:59] 2024-09-26 12:16:59,161 | INFO     | all workflow threads have been joined
[2024-09-26 08:16:59] 2024-09-26 12:16:59,161 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-26 08:16:59] 2024-09-26 12:16:59,162 | INFO     | traces error code: 0
[2024-09-26 08:16:59] 2024-09-26 12:16:59,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-26 08:16:59] 2024-09-26 12:16:59,241 [wrapper] ==== pilot stdout END ====
[2024-09-26 08:16:59] 2024-09-26 12:16:59,245 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-26 08:16:59] 2024-09-26 12:16:59,248 [wrapper] pilotpid: 3191887
[2024-09-26 08:16:59] 2024-09-26 12:16:59,251 [wrapper] Pilot exit status: 0
[2024-09-26 08:16:59] 2024-09-26 12:16:59,264 [wrapper] pandaids: 6347217892
[2024-09-26 08:16:59] 2024-09-26 12:16:59,318 [wrapper] cleanup supervisor_pilot 3487502 3191889
[2024-09-26 08:16:59] 2024-09-26 12:16:59,322 [wrapper] Test setup, not cleaning
[2024-09-26 08:16:59] 2024-09-26 12:16:59,325 [wrapper] ==== wrapper stdout END ====
[2024-09-26 08:16:59] 2024-09-26 12:16:59,328 [wrapper] ==== wrapper stderr END ====
[2024-09-26 08:16:59] 2024-09-26 12:16:59,336 [wrapper] apfmon messages muted
[2024-09-26 08:16:59]  *** Error codes and diagnostics ***
[2024-09-26 08:16:59]     "exeErrorCode": 0,
[2024-09-26 08:16:59]     "exeErrorDiag": "",
[2024-09-26 08:16:59]     "pilotErrorCode": 0,
[2024-09-26 08:16:59]     "pilotErrorDiag": "",
[2024-09-26 08:16:59]  *** Listing of results directory ***
[2024-09-26 08:16:59] total 588752
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas    482533 Sep 26 06:49 pilot3.tar.gz
[2024-09-26 08:16:59] -rwx------ 1 boincer umatlas     33814 Sep 26 06:57 runpilot2-wrapper.sh
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas      5653 Sep 26 06:57 queuedata.json
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas       100 Sep 26 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-26 08:16:59] -rwxr-xr-x 1 boincer umatlas      7986 Sep 26 07:12 run_atlas
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas       105 Sep 26 07:12 job.xml
[2024-09-26 08:16:59] -rw-r--r-- 2 boincer umatlas 442606977 Sep 26 07:13 EVNT.41081688._000029.pool.root.1
[2024-09-26 08:16:59] -rw-r--r-- 2 boincer umatlas     17537 Sep 26 07:13 start_atlas.sh
[2024-09-26 08:16:59] drwxrwx--x 2 boincer umatlas      4096 Sep 26 07:13 shared
[2024-09-26 08:16:59] -rw-r--r-- 2 boincer umatlas    496011 Sep 26 07:13 input.tar.gz
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas         0 Sep 26 07:13 boinc_lockfile
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas      2609 Sep 26 07:13 pandaJob.out
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas       424 Sep 26 07:13 setup.sh.local
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas   1016020 Sep 26 07:13 agis_schedconf.cvmfs.json
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas   1618603 Sep 26 07:13 agis_ddmendpoints.agis.ALL.json
[2024-09-26 08:16:59] drwx------ 4 boincer umatlas      4096 Sep 26 07:13 pilot3
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas      9054 Sep 26 08:11 init_data.xml
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas 155071497 Sep 26 08:16 HITS.41081690._000845.pool.root.1
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas       530 Sep 26 08:16 boinc_task_state.xml
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas        95 Sep 26 08:16 pilot_heartbeat.json
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas      1040 Sep 26 08:16 memory_monitor_summary.json
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas    294637 Sep 26 08:16 log.41081690._000845.job.log.tgz.1
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas      8192 Sep 26 08:16 boinc_mmap_file
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas        27 Sep 26 08:16 wrapper_checkpoint.txt
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas      7737 Sep 26 08:16 heartbeat.json
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas      4339 Sep 26 08:16 pilotlog.txt
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas    375055 Sep 26 08:16 log.41081690._000845.job.log.1
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas       357 Sep 26 08:16 output.list
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas       620 Sep 26 08:16 runtime_log
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas    686080 Sep 26 08:16 result.tar.gz
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas       641 Sep 26 08:16 wWdNDmwM1D6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmRqlKDmqBAsVm.diag
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas     10994 Sep 26 08:16 runtime_log.err
[2024-09-26 08:16:59] -rw-r--r-- 1 boincer umatlas     21293 Sep 26 08:16 stderr.txt
[2024-09-26 08:16:59] HITS file was successfully produced:
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas 155071497 Sep 26 08:16 shared/HITS.pool.root.1
[2024-09-26 08:16:59]  *** Contents of shared directory: ***
[2024-09-26 08:16:59] total 584864
[2024-09-26 08:16:59] -rw-r--r-- 2 boincer umatlas 442606977 Sep 26 07:13 ATLAS.root_0
[2024-09-26 08:16:59] -rw-r--r-- 2 boincer umatlas     17537 Sep 26 07:13 start_atlas.sh
[2024-09-26 08:16:59] -rw-r--r-- 2 boincer umatlas    496011 Sep 26 07:13 input.tar.gz
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas 155071497 Sep 26 08:16 HITS.pool.root.1
[2024-09-26 08:16:59] -rw------- 1 boincer umatlas    686080 Sep 26 08:16 result.tar.gz
08:17:01 (3178822): run_atlas exited; CPU time 22879.125612
08:17:01 (3178822): called boinc_finish(0)

</stderr_txt>
]]>

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