Name hXoLDmePhD6n7OlckoGmwREmGgkVDo1bjSoqOlfODmuPpKDmZGD0Go_0
Workunit 225620454
Created 25 Sep 2024, 14:05:03 UTC
Sent 25 Sep 2024, 15:40:52 UTC
Report deadline 3 Oct 2024, 15:40:52 UTC
Received 26 Sep 2024, 22:43:18 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10819291
Run time 55 min 39 sec
CPU time 4 hours 58 min 17 sec
Validate state Valid
Credit 241.53
Device peak FLOPS 32.96 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.64 GB
Peak swap size 3.00 GB
Peak disk usage 962.72 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
23:46:34 (3673642): wrapper (7.7.26015): starting
23:46:34 (3673642): wrapper: running run_atlas (--nthreads 6)
[2024-09-26 23:46:34] Arguments: --nthreads 6
[2024-09-26 23:46:34] Threads: 6
[2024-09-26 23:46:34] Checking for CVMFS
[2024-09-26 23:46:34] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-26 23:46:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-26 23:46:34] Running cvmfs_config stat atlas.cern.ch
[2024-09-26 23:46:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-26 23:46:34] 2.10.1.0 3365067 816 61180 137687 0 56 5620873 6144000 0 130560 0 1123700 99.996 125277 7337 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.202:3128 1
[2024-09-26 23:46:34] CVMFS is ok
[2024-09-26 23:46:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-26 23:46:34] Checking for apptainer binary...
[2024-09-26 23:46:34] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-26 23:46:34] Running /usr/bin/apptainer --version
[2024-09-26 23:46:34] apptainer version 1.3.0
[2024-09-26 23:46:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-26 23:46:34] Beta
[2024-09-26 23:46:34] apptainer works
[2024-09-26 23:46:34] Set ATHENA_PROC_NUMBER=6
[2024-09-26 23:46:34] Set ATHENA_CORE_NUMBER=6
[2024-09-26 23:46:34] Starting ATLAS job with PandaID=6342658787
[2024-09-26 23:46:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-27 00:42:10]  *** The last 200 lines of the pilot log: ***
[2024-09-27 00:42:10]  is_tar=False
[2024-09-27 00:42:10]  lfn=log.41081711._000788.job.log.tgz.1
[2024-09-27 00:42:10]  mtime=0
[2024-09-27 00:42:10]  protocol_id=None
[2024-09-27 00:42:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-27 00:42:10]  replicas=None
[2024-09-27 00:42:10]  scope=mc23_13p6TeV
[2024-09-27 00:42:10]  status=None
[2024-09-27 00:42:10]  status_code=0
[2024-09-27 00:42:10]  storage_token=
[2024-09-27 00:42:10]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6342658787/log.41081711._000788.job.log.tgz.1
[2024-09-27 00:42:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/66/log.41081711._000788.job.log.tgz.1
[2024-09-27 00:42:10]  workdir=None
[2024-09-27 00:42:10] ]
[2024-09-27 00:42:10] 2024-09-26 22:41:40,968 | INFO     | transferring file log.41081711._000788.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6342658787/log.41081711._000788.job.log.tgz.1 to /var/lib/boinc/slots/
[2024-09-27 00:42:10] 2024-09-26 22:41:40,969 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6342658787/log.41081711._000788.job.log.tgz.1 /var/lib/boinc/slots/0/log.41081711._000788.job
[2024-09-27 00:42:10] 2024-09-26 22:41:40,978 | INFO     | adding to output.list: log.41081711._000788.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/66/log.41081711._000788.job.log.tg
[2024-09-27 00:42:10] 2024-09-26 22:41:40,979 | INFO     | summary of transferred files:
[2024-09-27 00:42:10] 2024-09-26 22:41:40,979 | INFO     |  -- lfn=log.41081711._000788.job.log.tgz.1, status_code=0, status=transferred
[2024-09-27 00:42:10] 2024-09-26 22:41:40,979 | INFO     | stage-out finished correctly
[2024-09-27 00:42:10] 2024-09-26 22:41:42,889 | WARNING  | process 3683648 is no longer using CPU - aborting
[2024-09-27 00:42:10] 2024-09-26 22:41:44,085 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-27 00:42:10] 2024-09-26 22:41:44,128 | INFO     | job 6342658787 has state=finished
[2024-09-27 00:42:10] 2024-09-26 22:41:44,128 | INFO     | preparing for final server update for job 6342658787 in state='finished'
[2024-09-27 00:42:10] 2024-09-26 22:41:44,129 | INFO     | this job has now completed (state=finished)
[2024-09-27 00:42:10] 2024-09-26 22:41:44,129 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-27 00:42:10] 2024-09-26 22:41:44,129 | INFO     | log transfer has been attempted: DONE
[2024-09-27 00:42:10] 2024-09-26 22:41:44,129 | INFO     | job 6342658787 has finished - writing final server update
[2024-09-27 00:42:10] 2024-09-26 22:41:44,129 | INFO     | total number of processed events: 400 (read)
[2024-09-27 00:42:10] 2024-09-26 22:41:44,130 | INFO     | executing command: lscpu
[2024-09-27 00:42:10] 2024-09-26 22:41:44,141 | INFO     | found 4 cores (4 cores per socket, 1 sockets)
[2024-09-27 00:42:10] 2024-09-26 22:41:44,141 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-27 00:42:10] 2024-09-26 22:41:44,155 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-27 00:42:10] 2024-09-26 22:41:45,392 | INFO     | monitor loop #265: job 0:6342658787 is in state 'finished'
[2024-09-27 00:42:10] 2024-09-26 22:41:45,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-27 00:42:10] 2024-09-26 22:41:47,894 | INFO     | monitor loop #266: job 0:6342658787 is in state 'finished'
[2024-09-27 00:42:10] 2024-09-26 22:41:47,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-27 00:42:10] 2024-09-26 22:41:50,397 | INFO     | monitor loop #267: job 0:6342658787 is in state 'finished'
[2024-09-27 00:42:10] 2024-09-26 22:41:50,397 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-27 00:42:10] 2024-09-26 22:41:50,623 | INFO     | CPU arch script returned: x86-64-v3
[2024-09-27 00:42:10] 2024-09-26 22:41:50,624 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6342658787/memory_monitor_summary.json (trf name=prmon)
[2024-09-27 00:42:10] 2024-09-26 22:41:50,624 | INFO     | extracted standard info from prmon json
[2024-09-27 00:42:10] 2024-09-26 22:41:50,624 | INFO     | extracted standard memory fields from prmon json
[2024-09-27 00:42:10] 2024-09-26 22:41:50,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-27 00:42:10] 2024-09-26 22:41:50,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-27 00:42:10] 2024-09-26 22:41:50,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-27 00:42:10] 2024-09-26 22:41:50,625 | INFO     | fitting pss+swap vs Time
[2024-09-27 00:42:10] 2024-09-26 22:41:50,625 | INFO     | model: linear, x: [1727387526.0, 1727387587.0, 1727387648.0, 1727387709.0, 1727387770.0, 1727387831.0, 1727387892.0, 1727387953.0, 1727388014.0, 1727388075.0, 1727
[2024-09-27 00:42:10] 2024-09-26 22:41:50,625 | INFO     | sum of square deviations: 32179208.0
[2024-09-27 00:42:10] 2024-09-26 22:41:50,625 | INFO     | sum of deviations: -5709816916.000001
[2024-09-27 00:42:10] 2024-09-26 22:41:50,625 | INFO     | mean x: 1727388929.0
[2024-09-27 00:42:10] 2024-09-26 22:41:50,625 | INFO     | mean y: 2627192.1276595746
[2024-09-27 00:42:10] 2024-09-26 22:41:50,625 | INFO     | -- intersect: 306507203914.93964
[2024-09-27 00:42:10] 2024-09-26 22:41:50,625 | INFO     | intersect: 306507203914.93964
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | chi2: 0.10604128279472357
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | -- intersect: 306507203914.93964
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | current memory leak: -177.44 B/s (using 47 data points, chi2=0.11)
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | ..............................
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | . Timing measurements:
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | . get job = 0 s
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | . initial setup = 1 s
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | . payload setup = 4 s
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | . stage-in = 0 s
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | . payload execution = 3278 s
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | . stage-out = 0 s
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | . log creation = 0 s
[2024-09-27 00:42:10] 2024-09-26 22:41:50,626 | INFO     | ..............................
[2024-09-27 00:42:10] 2024-09-26 22:41:51,151 | INFO     | 
[2024-09-27 00:42:10] 2024-09-26 22:41:51,151 | INFO     | job summary report
[2024-09-27 00:42:10] 2024-09-26 22:41:51,151 | INFO     | --------------------------------------------------
[2024-09-27 00:42:10] 2024-09-26 22:41:51,151 | INFO     | PanDA job id: 6342658787
[2024-09-27 00:42:10] 2024-09-26 22:41:51,151 | INFO     | task id: 41081711
[2024-09-27 00:42:10] 2024-09-26 22:41:51,151 | INFO     | errors: (none)
[2024-09-27 00:42:10] 2024-09-26 22:41:51,152 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-27 00:42:10] 2024-09-26 22:41:51,152 | INFO     | pilot state: finished 
[2024-09-27 00:42:10] 2024-09-26 22:41:51,152 | INFO     | transexitcode: 0
[2024-09-27 00:42:10] 2024-09-26 22:41:51,152 | INFO     | exeerrorcode: 0
[2024-09-27 00:42:10] 2024-09-26 22:41:51,152 | INFO     | exeerrordiag: 
[2024-09-27 00:42:10] 2024-09-26 22:41:51,152 | INFO     | exitcode: 0
[2024-09-27 00:42:10] 2024-09-26 22:41:51,152 | INFO     | exitmsg: OK
[2024-09-27 00:42:10] 2024-09-26 22:41:51,153 | INFO     | cpuconsumptiontime: 17902 s
[2024-09-27 00:42:10] 2024-09-26 22:41:51,153 | INFO     | nevents: 400
[2024-09-27 00:42:10] 2024-09-26 22:41:51,153 | INFO     | neventsw: 0
[2024-09-27 00:42:10] 2024-09-26 22:41:51,153 | INFO     | pid: 3683648
[2024-09-27 00:42:10] 2024-09-26 22:41:51,153 | INFO     | pgrp: 3683648
[2024-09-27 00:42:10] 2024-09-26 22:41:51,153 | INFO     | corecount: 6
[2024-09-27 00:42:10] 2024-09-26 22:41:51,153 | INFO     | event service: False
[2024-09-27 00:42:10] 2024-09-26 22:41:51,153 | INFO     | sizes: {0: 2440159, 1: 2440301, 3: 2440507, 11: 2440535, 3286: 2466029, 3287: 2474989, 3290: 2475173, 3296: 2475343}
[2024-09-27 00:42:10] 2024-09-26 22:41:51,154 | INFO     | --------------------------------------------------
[2024-09-27 00:42:10] 2024-09-26 22:41:51,154 | INFO     | 
[2024-09-27 00:42:10] 2024-09-26 22:41:51,154 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-09-27 00:42:10] 2024-09-26 22:41:51,172 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,172 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,172 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,172 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,173 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-27 00:42:10] 2024-09-26 22:41:51,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,173 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-27 00:42:10] 2024-09-26 22:41:51,173 | INFO     | job 6342658787 has completed (purged errors)
[2024-09-27 00:42:10] 2024-09-26 22:41:51,173 | INFO     | overall cleanup function is called
[2024-09-27 00:42:10] 2024-09-26 22:41:52,180 | INFO     | --- collectZombieJob: --- 10, [3683648]
[2024-09-27 00:42:10] 2024-09-26 22:41:52,181 | INFO     | zombie collector waiting for pid 3683648
[2024-09-27 00:42:10] 2024-09-26 22:41:52,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-27 00:42:10] 2024-09-26 22:41:52,181 | INFO     | collected zombie processes
[2024-09-27 00:42:10] 2024-09-26 22:41:52,181 | INFO     | will  attempt to kill all subprocesses of pid=3683648
[2024-09-27 00:42:10] 2024-09-26 22:41:52,224 | INFO     | process IDs to be killed: [3683648] (in reverse order)
[2024-09-27 00:42:10] 2024-09-26 22:41:52,247 | WARNING  | found no corresponding commands to process id(s)
[2024-09-27 00:42:10] 2024-09-26 22:41:52,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-27 00:42:10] 2024-09-26 22:41:52,249 | INFO     | did not find any defunct processes belonging to 3683648
[2024-09-27 00:42:10] 2024-09-26 22:41:52,250 | INFO     | did not find any defunct processes belonging to 3683648
[2024-09-27 00:42:10] 2024-09-26 22:41:52,250 | INFO     | ready for new job
[2024-09-27 00:42:10] 2024-09-26 22:41:52,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-27 00:42:10] 2024-09-26 22:41:52,251 | INFO     | **************************************
[2024-09-27 00:42:10] 2024-09-26 22:41:52,251 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-27 00:42:10] 2024-09-26 22:41:52,251 | INFO     | **************************************
[2024-09-27 00:42:10] 2024-09-26 22:41:52,251 | INFO     | 
[2024-09-27 00:42:10] 2024-09-26 22:41:52,252 | INFO     | architecture information:
[2024-09-27 00:42:10] 2024-09-26 22:41:52,252 | INFO     | executing command: cat /etc/os-release
[2024-09-27 00:42:10] 2024-09-26 22:41:52,260 | INFO     | cat /etc/os-release:
[2024-09-27 00:42:10] NAME="CentOS Linux"
[2024-09-27 00:42:10] VERSION="7 (Core)"
[2024-09-27 00:42:10] ID="centos"
[2024-09-27 00:42:10] ID_LIKE="rhel fedora"
[2024-09-27 00:42:10] VERSION_ID="7"
[2024-09-27 00:42:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-27 00:42:10] ANSI_COLOR="0;31"
[2024-09-27 00:42:10] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-27 00:42:10] HOME_URL="https://www.centos.org/"
[2024-09-27 00:42:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-27 00:42:10] 
[2024-09-27 00:42:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-27 00:42:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-27 00:42:10] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-27 00:42:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-27 00:42:10] 
[2024-09-27 00:42:10] 2024-09-26 22:41:52,261 | INFO     | **************************************
[2024-09-27 00:42:10] 2024-09-26 22:41:52,764 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-09-27 00:42:10] 2024-09-26 22:41:52,790 | INFO     | sufficient remaining disk space (284122152960 B)
[2024-09-27 00:42:10] 2024-09-26 22:41:52,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-27 00:42:10] 2024-09-26 22:41:52,791 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-27 00:42:10] 2024-09-26 22:41:52,901 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-09-27 00:42:10] 2024-09-26 22:41:52,902 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-09-27 00:42:10] 2024-09-26 22:41:52,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-27 00:42:10] 2024-09-26 22:41:52,902 | INFO     | will abort loop
[2024-09-27 00:42:10] 2024-09-26 22:41:52,948 | INFO     | found 0 job(s) in 20 queues
[2024-09-27 00:42:10] 2024-09-26 22:41:52,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-27 00:42:10] 2024-09-26 22:41:52,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-27 00:42:10] 2024-09-26 22:41:53,094 | INFO     | all data control threads have been joined
[2024-09-27 00:42:10] 2024-09-26 22:41:53,682 | INFO     | all job control threads have been joined
[2024-09-27 00:42:10] 2024-09-26 22:41:53,797 | INFO     | [job] retrieve thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:53,823 | INFO     | [payload] validate_pre thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:53,908 | INFO     | [job] job monitor thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:53,978 | INFO     | all payload control threads have been joined
[2024-09-27 00:42:10] 2024-09-26 22:41:54,015 | INFO     | [payload] validate_post thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:54,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-27 00:42:10] 2024-09-26 22:41:54,100 | INFO     | [data] control thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:54,375 | INFO     | [data] copytool_in thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:54,638 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-27 00:42:10] 2024-09-26 22:41:54,679 | INFO     | [payload] execute_payloads thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:54,687 | INFO     | [job] control thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:54,983 | INFO     | [payload] control thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:55,065 | INFO     | [payload] failed_post thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:55,196 | INFO     | [job] validate thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:55,279 | INFO     | [job] create_data_payload thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:55,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-27 00:42:10] 2024-09-26 22:41:56,040 | INFO     | [data] copytool_out thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:56,682 | INFO     | [job] queue monitor thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:41:58,644 | INFO     | [data] queue_monitor thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:42:03,513 | INFO     | job.realtimelogging is not enabled
[2024-09-27 00:42:10] 2024-09-26 22:42:04,519 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-27 00:42:10] 2024-09-26 22:42:05,315 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860998006592)>', '<ExcThread(monitor, started 139860721501952)>']
[2024-09-27 00:42:10] 2024-09-26 22:42:06,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-27 00:42:10] 2024-09-26 22:42:06,018 | INFO     | [monitor] control thread has ended
[2024-09-27 00:42:10] 2024-09-26 22:42:10,324 | INFO     | all workflow threads have been joined
[2024-09-27 00:42:10] 2024-09-26 22:42:10,325 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-27 00:42:10] 2024-09-26 22:42:10,325 | INFO     | traces error code: 0
[2024-09-27 00:42:10] 2024-09-26 22:42:10,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-27 00:42:10] 2024-09-26 22:42:10,391 [wrapper] ==== pilot stdout END ====
[2024-09-27 00:42:10] 2024-09-26 22:42:10,393 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-27 00:42:10] 2024-09-26 22:42:10,395 [wrapper] pilotpid: 3677273
[2024-09-27 00:42:10] 2024-09-26 22:42:10,397 [wrapper] Pilot exit status: 0
[2024-09-27 00:42:10] 2024-09-26 22:42:10,402 [wrapper] pandaids: 6342658787
[2024-09-27 00:42:10] 2024-09-26 22:42:10,417 [wrapper] cleanup supervisor_pilot 3693061 3677274
[2024-09-27 00:42:10] 2024-09-26 22:42:10,419 [wrapper] Test setup, not cleaning
[2024-09-27 00:42:10] 2024-09-26 22:42:10,421 [wrapper] ==== wrapper stdout END ====
[2024-09-27 00:42:10] 2024-09-26 22:42:10,422 [wrapper] ==== wrapper stderr END ====
[2024-09-27 00:42:10] 2024-09-26 22:42:10,426 [wrapper] apfmon messages muted
[2024-09-27 00:42:10]  *** Error codes and diagnostics ***
[2024-09-27 00:42:10]     "exeErrorCode": 0,
[2024-09-27 00:42:10]     "exeErrorDiag": "",
[2024-09-27 00:42:10]     "pilotErrorCode": 0,
[2024-09-27 00:42:10]     "pilotErrorDiag": "",
[2024-09-27 00:42:10]  *** Listing of results directory ***
[2024-09-27 00:42:10] insgesamt 579736
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc    482533 25. Sep 15:11 pilot3.tar.gz
[2024-09-27 00:42:10] -rwx------ 1 boinc boinc     33814 25. Sep 15:39 runpilot2-wrapper.sh
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc      5655 25. Sep 15:53 queuedata.json
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc       100 26. Sep 23:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-27 00:42:10] -rwxr-xr-x 1 boinc boinc      7986 26. Sep 23:46 run_atlas
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc       105 26. Sep 23:46 job.xml
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc      6721 26. Sep 23:46 init_data.xml
[2024-09-27 00:42:10] -rw-r--r-- 2 boinc boinc 436045191 26. Sep 23:46 EVNT.41081709._000003.pool.root.1
[2024-09-27 00:42:10] -rw-r--r-- 2 boinc boinc     17539 26. Sep 23:46 start_atlas.sh
[2024-09-27 00:42:10] drwxrwx--x 2 boinc boinc      4096 26. Sep 23:46 shared
[2024-09-27 00:42:10] -rw-r--r-- 2 boinc boinc    495995 26. Sep 23:46 input.tar.gz
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc         0 26. Sep 23:46 boinc_lockfile
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc      2567 26. Sep 23:46 pandaJob.out
[2024-09-27 00:42:10] -rw------- 1 boinc boinc       462 26. Sep 23:46 setup.sh.local
[2024-09-27 00:42:10] -rw------- 1 boinc boinc   1013996 26. Sep 23:46 agis_schedconf.cvmfs.json
[2024-09-27 00:42:10] -rw------- 1 boinc boinc   1618603 26. Sep 23:46 agis_ddmendpoints.agis.ALL.json
[2024-09-27 00:42:10] drwx------ 4 boinc boinc      4096 26. Sep 23:46 pilot3
[2024-09-27 00:42:10] -rw------- 1 boinc boinc 152579112 27. Sep 00:41 HITS.41081711._000788.pool.root.1
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc       530 27. Sep 00:41 boinc_task_state.xml
[2024-09-27 00:42:10] -rw------- 1 boinc boinc      1018 27. Sep 00:41 memory_monitor_summary.json
[2024-09-27 00:42:10] -rw------- 1 boinc boinc    248502 27. Sep 00:41 log.41081711._000788.job.log.tgz.1
[2024-09-27 00:42:10] -rw------- 1 boinc boinc        95 27. Sep 00:41 pilot_heartbeat.json
[2024-09-27 00:42:10] -rw------- 1 boinc boinc      7659 27. Sep 00:41 heartbeat.json
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc        27 27. Sep 00:41 wrapper_checkpoint.txt
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc      8192 27. Sep 00:41 boinc_mmap_file
[2024-09-27 00:42:10] -rw------- 1 boinc boinc      4474 27. Sep 00:42 pilotlog.txt
[2024-09-27 00:42:10] -rw------- 1 boinc boinc    335092 27. Sep 00:42 log.41081711._000788.job.log.1
[2024-09-27 00:42:10] -rw------- 1 boinc boinc       357 27. Sep 00:42 output.list
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc       620 27. Sep 00:42 runtime_log
[2024-09-27 00:42:10] -rw------- 1 boinc boinc    604160 27. Sep 00:42 result.tar.gz
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc     11317 27. Sep 00:42 runtime_log.err
[2024-09-27 00:42:10] -rw------- 1 boinc boinc       627 27. Sep 00:42 hXoLDmePhD6n7OlckoGmwREmGgkVDo1bjSoqOlfODmuPpKDmZGD0Go.diag
[2024-09-27 00:42:10] -rw-r--r-- 1 boinc boinc     21211 27. Sep 00:42 stderr.txt
[2024-09-27 00:42:10] HITS file was successfully produced:
[2024-09-27 00:42:10] -rw------- 1 boinc boinc 152579112 27. Sep 00:41 shared/HITS.pool.root.1
[2024-09-27 00:42:10]  *** Contents of shared directory: ***
[2024-09-27 00:42:10] insgesamt 575940
[2024-09-27 00:42:10] -rw-r--r-- 2 boinc boinc 436045191 26. Sep 23:46 ATLAS.root_0
[2024-09-27 00:42:10] -rw-r--r-- 2 boinc boinc     17539 26. Sep 23:46 start_atlas.sh
[2024-09-27 00:42:10] -rw-r--r-- 2 boinc boinc    495995 26. Sep 23:46 input.tar.gz
[2024-09-27 00:42:10] -rw------- 1 boinc boinc 152579112 27. Sep 00:41 HITS.pool.root.1
[2024-09-27 00:42:10] -rw------- 1 boinc boinc    604160 27. Sep 00:42 result.tar.gz
00:42:12 (3673642): run_atlas exited; CPU time 17897.683881
00:42:12 (3673642): called boinc_finish(0)

</stderr_txt>
]]>


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