Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:49:57 (19686): wrapper (7.7.26015): starting
09:49:57 (19686): wrapper: running run_atlas (--nthreads 8)
[2024-09-25 09:49:57] Arguments: --nthreads 8
[2024-09-25 09:49:57] Threads: 8
[2024-09-25 09:49:57] Checking for CVMFS
[2024-09-25 09:49:57] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-25 09:49:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-25 09:49:58] Running cvmfs_config stat atlas.cern.ch
[2024-09-25 09:49:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-25 09:49:58] 2.11.2.0 2871 85945 123944 137640 0 1 17482366 20275201 1 130560 0 43400064 99.959 13354084 35655 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-09-25 09:49:58] CVMFS is ok
[2024-09-25 09:49:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-25 09:49:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-25 09:49:58] Further information can be found at the LHC@home message board.
[2024-09-25 09:49:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-25 09:49:58] Checking for apptainer binary...
[2024-09-25 09:49:58] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-25 09:49:58] Running /usr/bin/apptainer --version
[2024-09-25 09:49:58] apptainer version 1.3.2-1.el7
[2024-09-25 09:49:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-25 09:50:00] c-204-34.aglt2.org
[2024-09-25 09:50:00] apptainer works
[2024-09-25 09:50:00] Set ATHENA_PROC_NUMBER=8
[2024-09-25 09:50:00] Set ATHENA_CORE_NUMBER=8
[2024-09-25 09:50:00] Starting ATLAS job with PandaID=6342667652
[2024-09-25 09:50:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-25 11:20:38]  *** The last 200 lines of the pilot log: ***
[2024-09-25 11:20:38]  guid=45d1f4e6-de0a-4c22-bdbf-0e6b0307a86a
[2024-09-25 11:20:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-25 11:20:38]  is_tar=False
[2024-09-25 11:20:38]  lfn=log.41081670._000223.job.log.tgz.1
[2024-09-25 11:20:38]  mtime=0
[2024-09-25 11:20:38]  protocol_id=None
[2024-09-25 11:20:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-25 11:20:38]  replicas=None
[2024-09-25 11:20:38]  scope=mc23_13p6TeV
[2024-09-25 11:20:38]  status=None
[2024-09-25 11:20:38]  status_code=0
[2024-09-25 11:20:38]  storage_token=
[2024-09-25 11:20:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6342667652/log.41081670._000223.job.log.tgz.1
[2024-09-25 11:20:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/35/log.41081670._000223.job.log.tgz.1
[2024-09-25 11:20:38]  workdir=None
[2024-09-25 11:20:38] ]
[2024-09-25 11:20:38] 2024-09-25 15:20:15,803 | INFO     | transferring file log.41081670._000223.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6342667652/log.41081670._000223.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-09-25 11:20:38] 2024-09-25 15:20:15,803 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6342667652/log.41081670._000223.job.log.tgz.1 /tmp/boinchome/slots/0/log.41081670._000223.job
[2024-09-25 11:20:38] 2024-09-25 15:20:15,832 | INFO     | adding to output.list: log.41081670._000223.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/35/log.41081670._000223.job.log.tg
[2024-09-25 11:20:38] 2024-09-25 15:20:15,834 | INFO     | summary of transferred files:
[2024-09-25 11:20:38] 2024-09-25 15:20:15,834 | INFO     |  -- lfn=log.41081670._000223.job.log.tgz.1, status_code=0, status=transferred
[2024-09-25 11:20:38] 2024-09-25 15:20:15,834 | INFO     | stage-out finished correctly
[2024-09-25 11:20:38] 2024-09-25 15:20:16,228 | INFO     | monitor loop #408: job 0:6342667652 is in state 'finished'
[2024-09-25 11:20:38] 2024-09-25 15:20:16,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-25 11:20:38] 2024-09-25 15:20:17,596 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-25 11:20:38] 2024-09-25 15:20:18,115 | INFO     | job 6342667652 has state=finished
[2024-09-25 11:20:38] 2024-09-25 15:20:18,116 | INFO     | preparing for final server update for job 6342667652 in state='finished'
[2024-09-25 11:20:38] 2024-09-25 15:20:18,117 | INFO     | this job has now completed (state=finished)
[2024-09-25 11:20:38] 2024-09-25 15:20:18,117 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-25 11:20:38] 2024-09-25 15:20:18,117 | INFO     | log transfer has been attempted: DONE
[2024-09-25 11:20:38] 2024-09-25 15:20:18,117 | INFO     | job 6342667652 has finished - writing final server update
[2024-09-25 11:20:38] 2024-09-25 15:20:18,118 | INFO     | total number of processed events: 400 (read)
[2024-09-25 11:20:38] 2024-09-25 15:20:18,119 | INFO     | executing command: lscpu
[2024-09-25 11:20:38] 2024-09-25 15:20:18,150 | INFO     | found 8 cores (4 cores per socket, 2 sockets)
[2024-09-25 11:20:38] 2024-09-25 15:20:18,151 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-25 11:20:38] 2024-09-25 15:20:18,192 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-25 11:20:38] 2024-09-25 15:20:18,731 | INFO     | monitor loop #409: job 0:6342667652 is in state 'finished'
[2024-09-25 11:20:38] 2024-09-25 15:20:18,732 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-25 11:20:38] 2024-09-25 15:20:21,235 | INFO     | monitor loop #410: job 0:6342667652 is in state 'finished'
[2024-09-25 11:20:38] 2024-09-25 15:20:21,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-25 11:20:38] 2024-09-25 15:20:23,738 | INFO     | monitor loop #411: job 0:6342667652 is in state 'finished'
[2024-09-25 11:20:38] 2024-09-25 15:20:23,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-25 11:20:38] 2024-09-25 15:20:24,400 | INFO     | CPU arch script returned: x86-64-v2
[2024-09-25 11:20:38] 2024-09-25 15:20:24,400 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6342667652/memory_monitor_summary.json (trf name=prmon)
[2024-09-25 11:20:38] 2024-09-25 15:20:24,402 | INFO     | extracted standard info from prmon json
[2024-09-25 11:20:38] 2024-09-25 15:20:24,402 | INFO     | extracted standard memory fields from prmon json
[2024-09-25 11:20:38] 2024-09-25 15:20:24,402 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-25 11:20:38] 2024-09-25 15:20:24,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-25 11:20:38] 2024-09-25 15:20:24,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-25 11:20:38] 2024-09-25 15:20:24,405 | INFO     | fitting pss+swap vs Time
[2024-09-25 11:20:38] 2024-09-25 15:20:24,405 | INFO     | model: linear, x: [1727272556.0, 1727272617.0, 1727272678.0, 1727272739.0, 1727272800.0, 1727272861.0, 1727272922.0, 1727272983.0, 1727273044.0, 1727273105.0, 1727
[2024-09-25 11:20:38] 2024-09-25 15:20:24,405 | INFO     | sum of square deviations: 164765880.0
[2024-09-25 11:20:38] 2024-09-25 15:20:24,406 | INFO     | sum of deviations: 92895679.99999961
[2024-09-25 11:20:38] 2024-09-25 15:20:24,406 | INFO     | mean x: 1727274996.0
[2024-09-25 11:20:38] 2024-09-25 15:20:24,406 | INFO     | mean y: 2528710.925925926
[2024-09-25 11:20:38] 2024-09-25 15:20:24,406 | INFO     | -- intersect: -971316027.441123
[2024-09-25 11:20:38] 2024-09-25 15:20:24,406 | INFO     | intersect: -971316027.441123
[2024-09-25 11:20:38] 2024-09-25 15:20:24,407 | INFO     | chi2: 0.103732465060724
[2024-09-25 11:20:38] 2024-09-25 15:20:24,407 | INFO     | -- intersect: -971316027.441123
[2024-09-25 11:20:38] 2024-09-25 15:20:24,407 | INFO     | current memory leak: 0.56 B/s (using 81 data points, chi2=0.10)
[2024-09-25 11:20:38] 2024-09-25 15:20:24,408 | INFO     | ..............................
[2024-09-25 11:20:38] 2024-09-25 15:20:24,408 | INFO     | . Timing measurements:
[2024-09-25 11:20:38] 2024-09-25 15:20:24,408 | INFO     | . get job = 0 s
[2024-09-25 11:20:38] 2024-09-25 15:20:24,408 | INFO     | . initial setup = 2 s
[2024-09-25 11:20:38] 2024-09-25 15:20:24,408 | INFO     | . payload setup = 9 s
[2024-09-25 11:20:38] 2024-09-25 15:20:24,408 | INFO     | . stage-in = 0 s
[2024-09-25 11:20:38] 2024-09-25 15:20:24,408 | INFO     | . payload execution = 5365 s
[2024-09-25 11:20:38] 2024-09-25 15:20:24,408 | INFO     | . stage-out = 0 s
[2024-09-25 11:20:38] 2024-09-25 15:20:24,409 | INFO     | . log creation = 0 s
[2024-09-25 11:20:38] 2024-09-25 15:20:24,409 | INFO     | ..............................
[2024-09-25 11:20:38] 2024-09-25 15:20:25,003 | INFO     | 
[2024-09-25 11:20:38] 2024-09-25 15:20:25,004 | INFO     | job summary report
[2024-09-25 11:20:38] 2024-09-25 15:20:25,004 | INFO     | --------------------------------------------------
[2024-09-25 11:20:38] 2024-09-25 15:20:25,004 | INFO     | PanDA job id: 6342667652
[2024-09-25 11:20:38] 2024-09-25 15:20:25,004 | INFO     | task id: 41081670
[2024-09-25 11:20:38] 2024-09-25 15:20:25,004 | INFO     | errors: (none)
[2024-09-25 11:20:38] 2024-09-25 15:20:25,004 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-25 11:20:38] 2024-09-25 15:20:25,005 | INFO     | pilot state: finished 
[2024-09-25 11:20:38] 2024-09-25 15:20:25,005 | INFO     | transexitcode: 0
[2024-09-25 11:20:38] 2024-09-25 15:20:25,005 | INFO     | exeerrorcode: 0
[2024-09-25 11:20:38] 2024-09-25 15:20:25,005 | INFO     | exeerrordiag: 
[2024-09-25 11:20:38] 2024-09-25 15:20:25,005 | INFO     | exitcode: 0
[2024-09-25 11:20:38] 2024-09-25 15:20:25,005 | INFO     | exitmsg: OK
[2024-09-25 11:20:38] 2024-09-25 15:20:25,005 | INFO     | cpuconsumptiontime: 38219 s
[2024-09-25 11:20:38] 2024-09-25 15:20:25,006 | INFO     | nevents: 400
[2024-09-25 11:20:38] 2024-09-25 15:20:25,006 | INFO     | neventsw: 0
[2024-09-25 11:20:38] 2024-09-25 15:20:25,006 | INFO     | pid: 30558
[2024-09-25 11:20:38] 2024-09-25 15:20:25,006 | INFO     | pgrp: 30558
[2024-09-25 11:20:38] 2024-09-25 15:20:25,006 | INFO     | corecount: 8
[2024-09-25 11:20:38] 2024-09-25 15:20:25,006 | INFO     | event service: False
[2024-09-25 11:20:38] 2024-09-25 15:20:25,007 | INFO     | sizes: {0: 2440091, 1: 2440290, 7: 2440496, 12: 2440524, 5378: 2466836, 5380: 2475796, 5382: 2475980, 5389: 2476150}
[2024-09-25 11:20:38] 2024-09-25 15:20:25,007 | INFO     | --------------------------------------------------
[2024-09-25 11:20:38] 2024-09-25 15:20:25,007 | INFO     | 
[2024-09-25 11:20:38] 2024-09-25 15:20:25,007 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-09-25 11:20:38] 2024-09-25 15:20:25,037 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,038 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,038 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,038 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,040 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,041 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-25 11:20:38] 2024-09-25 15:20:25,041 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,041 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-25 11:20:38] 2024-09-25 15:20:25,041 | INFO     | job 6342667652 has completed (purged errors)
[2024-09-25 11:20:38] 2024-09-25 15:20:25,041 | INFO     | overall cleanup function is called
[2024-09-25 11:20:38] 2024-09-25 15:20:26,049 | INFO     | --- collectZombieJob: --- 10, [30558]
[2024-09-25 11:20:38] 2024-09-25 15:20:26,050 | INFO     | zombie collector waiting for pid 30558
[2024-09-25 11:20:38] 2024-09-25 15:20:26,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-25 11:20:38] 2024-09-25 15:20:26,050 | INFO     | collected zombie processes
[2024-09-25 11:20:38] 2024-09-25 15:20:26,050 | INFO     | will  attempt to kill all subprocesses of pid=30558
[2024-09-25 11:20:38] 2024-09-25 15:20:26,122 | INFO     | process IDs to be killed: [30558] (in reverse order)
[2024-09-25 11:20:38] 2024-09-25 15:20:26,179 | WARNING  | found no corresponding commands to process id(s)
[2024-09-25 11:20:38] 2024-09-25 15:20:26,179 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-25 11:20:38] 2024-09-25 15:20:26,183 | INFO     | did not find any defunct processes belonging to 30558
[2024-09-25 11:20:38] 2024-09-25 15:20:26,185 | INFO     | did not find any defunct processes belonging to 30558
[2024-09-25 11:20:38] 2024-09-25 15:20:26,186 | INFO     | ready for new job
[2024-09-25 11:20:38] 2024-09-25 15:20:26,186 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-25 11:20:38] 2024-09-25 15:20:26,187 | INFO     | **************************************
[2024-09-25 11:20:38] 2024-09-25 15:20:26,187 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-25 11:20:38] 2024-09-25 15:20:26,187 | INFO     | **************************************
[2024-09-25 11:20:38] 2024-09-25 15:20:26,188 | INFO     | 
[2024-09-25 11:20:38] 2024-09-25 15:20:26,188 | INFO     | architecture information:
[2024-09-25 11:20:38] 2024-09-25 15:20:26,189 | INFO     | executing command: cat /etc/os-release
[2024-09-25 11:20:38] 2024-09-25 15:20:26,208 | INFO     | cat /etc/os-release:
[2024-09-25 11:20:38] NAME="CentOS Linux"
[2024-09-25 11:20:38] VERSION="7 (Core)"
[2024-09-25 11:20:38] ID="centos"
[2024-09-25 11:20:38] ID_LIKE="rhel fedora"
[2024-09-25 11:20:38] VERSION_ID="7"
[2024-09-25 11:20:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-25 11:20:38] ANSI_COLOR="0;31"
[2024-09-25 11:20:38] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-25 11:20:38] HOME_URL="https://www.centos.org/"
[2024-09-25 11:20:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-25 11:20:38] 
[2024-09-25 11:20:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-25 11:20:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-25 11:20:38] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-25 11:20:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-25 11:20:38] 
[2024-09-25 11:20:38] 2024-09-25 15:20:26,209 | INFO     | **************************************
[2024-09-25 11:20:38] 2024-09-25 15:20:26,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-09-25 11:20:38] 2024-09-25 15:20:26,735 | INFO     | sufficient remaining disk space (18230542336 B)
[2024-09-25 11:20:38] 2024-09-25 15:20:26,735 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-25 11:20:38] 2024-09-25 15:20:26,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-25 11:20:38] 2024-09-25 15:20:26,736 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-25 11:20:38] 2024-09-25 15:20:27,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-25 11:20:38] 2024-09-25 15:20:27,247 | INFO     | aborting loop
[2024-09-25 11:20:38] 2024-09-25 15:20:27,333 | INFO     | all data control threads have been joined
[2024-09-25 11:20:38] 2024-09-25 15:20:27,399 | INFO     | found 0 job(s) in 20 queues
[2024-09-25 11:20:38] 2024-09-25 15:20:27,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-25 11:20:38] 2024-09-25 15:20:27,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-25 11:20:38] 2024-09-25 15:20:27,634 | INFO     | all payload control threads have been joined
[2024-09-25 11:20:38] 2024-09-25 15:20:27,741 | INFO     | [job] retrieve thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:27,925 | INFO     | all job control threads have been joined
[2024-09-25 11:20:38] 2024-09-25 15:20:27,927 | INFO     | [job] create_data_payload thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:28,050 | INFO     | [payload] validate_pre thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:28,102 | INFO     | [payload] execute_payloads thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:28,194 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-25 11:20:38] 2024-09-25 15:20:28,253 | INFO     | [job] job monitor thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:28,314 | INFO     | [data] copytool_in thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:28,339 | INFO     | [data] control thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:28,639 | INFO     | [payload] failed_post thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:28,639 | INFO     | [payload] control thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:28,742 | INFO     | [data] copytool_out thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:28,822 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:28,931 | INFO     | [job] control thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:29,058 | INFO     | [job] validate thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:29,219 | INFO     | [payload] validate_post thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:29,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-25 11:20:38] 2024-09-25 15:20:30,520 | INFO     | [job] queue monitor thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:32,200 | INFO     | [data] queue_monitor thread has finished
[2024-09-25 11:20:38] 2024-09-25 15:20:32,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139799454529344)>', '<ExcThread(monitor, started 139798350124800)>']
[2024-09-25 11:20:38] 2024-09-25 15:20:33,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-25 11:20:38] 2024-09-25 15:20:33,431 | INFO     | [monitor] control thread has ended
[2024-09-25 11:20:38] 2024-09-25 15:20:37,774 | INFO     | all workflow threads have been joined
[2024-09-25 11:20:38] 2024-09-25 15:20:37,774 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-25 11:20:38] 2024-09-25 15:20:37,775 | INFO     | traces error code: 0
[2024-09-25 11:20:38] 2024-09-25 15:20:37,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-25 11:20:38] 2024-09-25 15:20:37,885 [wrapper] ==== pilot stdout END ====
[2024-09-25 11:20:38] 2024-09-25 15:20:37,889 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-25 11:20:38] 2024-09-25 15:20:37,893 [wrapper] pilotpid: 24232
[2024-09-25 11:20:38] 2024-09-25 15:20:37,898 [wrapper] Pilot exit status: 0
[2024-09-25 11:20:38] 2024-09-25 15:20:37,916 [wrapper] pandaids: 6342667652
[2024-09-25 11:20:38] 2024-09-25 15:20:37,961 [wrapper] cleanup supervisor_pilot 18306 24233
[2024-09-25 11:20:38] 2024-09-25 15:20:37,966 [wrapper] Test setup, not cleaning
[2024-09-25 11:20:38] 2024-09-25 15:20:37,972 [wrapper] ==== wrapper stdout END ====
[2024-09-25 11:20:38] 2024-09-25 15:20:37,976 [wrapper] ==== wrapper stderr END ====
[2024-09-25 11:20:38] 2024-09-25 15:20:37,986 [wrapper] apfmon messages muted
[2024-09-25 11:20:38]  *** Error codes and diagnostics ***
[2024-09-25 11:20:38]     "exeErrorCode": 0,
[2024-09-25 11:20:38]     "exeErrorDiag": "",
[2024-09-25 11:20:38]     "pilotErrorCode": 0,
[2024-09-25 11:20:38]     "pilotErrorDiag": "",
[2024-09-25 11:20:38]  *** Listing of results directory ***
[2024-09-25 11:20:38] total 588576
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas    482533 Sep 25 09:11 pilot3.tar.gz
[2024-09-25 11:20:38] -rwx------ 1 boincer umatlas     33814 Sep 25 09:39 runpilot2-wrapper.sh
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas      5655 Sep 25 09:48 queuedata.json
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas       100 Sep 25 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-25 11:20:38] -rwxr-xr-x 1 boincer umatlas      7986 Sep 25 09:49 run_atlas
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas       105 Sep 25 09:49 job.xml
[2024-09-25 11:20:38] -rw-r--r-- 2 boincer umatlas 442308528 Sep 25 09:49 EVNT.41081668._000009.pool.root.1
[2024-09-25 11:20:38] -rw-r--r-- 2 boincer umatlas    496007 Sep 25 09:49 input.tar.gz
[2024-09-25 11:20:38] -rw-r--r-- 2 boincer umatlas     17539 Sep 25 09:49 start_atlas.sh
[2024-09-25 11:20:38] drwxrwx--x 2 boincer umatlas      4096 Sep 25 09:49 shared
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas         0 Sep 25 09:49 boinc_lockfile
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas      2604 Sep 25 09:50 pandaJob.out
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas       462 Sep 25 09:50 setup.sh.local
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas   1018278 Sep 25 09:50 agis_schedconf.cvmfs.json
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas   1618603 Sep 25 09:50 agis_ddmendpoints.agis.ALL.json
[2024-09-25 11:20:38] drwx------ 4 boincer umatlas      4096 Sep 25 09:50 pilot3
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas      5905 Sep 25 11:19 init_data.xml
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas        95 Sep 25 11:19 pilot_heartbeat.json
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas 154909492 Sep 25 11:19 HITS.41081670._000223.pool.root.1
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas       530 Sep 25 11:20 boinc_task_state.xml
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas      1047 Sep 25 11:20 memory_monitor_summary.json
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas    323910 Sep 25 11:20 log.41081670._000223.job.log.tgz.1
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas      7751 Sep 25 11:20 heartbeat.json
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas        27 Sep 25 11:20 wrapper_checkpoint.txt
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas      8192 Sep 25 11:20 boinc_mmap_file
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas      4215 Sep 25 11:20 pilotlog.txt
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas    489037 Sep 25 11:20 log.41081670._000223.job.log.1
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas       357 Sep 25 11:20 output.list
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas       620 Sep 25 11:20 runtime_log
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas    829440 Sep 25 11:20 result.tar.gz
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas     11375 Sep 25 11:20 runtime_log.err
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas       647 Sep 25 11:20 nW6KDmhPhD6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmZAiKDmaM51yn.diag
[2024-09-25 11:20:38] -rw-r--r-- 1 boincer umatlas     21466 Sep 25 11:20 stderr.txt
[2024-09-25 11:20:38] HITS file was successfully produced:
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas 154909492 Sep 25 11:19 shared/HITS.pool.root.1
[2024-09-25 11:20:38]  *** Contents of shared directory: ***
[2024-09-25 11:20:38] total 584548
[2024-09-25 11:20:38] -rw-r--r-- 2 boincer umatlas 442308528 Sep 25 09:49 ATLAS.root_0
[2024-09-25 11:20:38] -rw-r--r-- 2 boincer umatlas    496007 Sep 25 09:49 input.tar.gz
[2024-09-25 11:20:38] -rw-r--r-- 2 boincer umatlas     17539 Sep 25 09:49 start_atlas.sh
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas 154909492 Sep 25 11:19 HITS.pool.root.1
[2024-09-25 11:20:38] -rw------- 1 boincer umatlas    829440 Sep 25 11:20 result.tar.gz
11:20:39 (19686): run_atlas exited; CPU time 38090.774617
11:20:39 (19686): called boinc_finish(0)

</stderr_txt>
]]>

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