Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:38:01 (32149): wrapper (7.7.26015): starting
08:38:01 (32149): wrapper: running run_atlas (--nthreads 8)
[2024-09-23 08:38:01] Arguments: --nthreads 8
[2024-09-23 08:38:01] Threads: 8
[2024-09-23 08:38:01] Checking for CVMFS
[2024-09-23 08:38:01] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-23 08:38:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-23 08:38:02] Running cvmfs_config stat atlas.cern.ch
[2024-09-23 08:38:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-23 08:38:02] 2.11.2.0 2871 82993 118108 137559 1 60 16380685 20275200 1 130560 0 43166584 99.959 13114819 35496 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-09-23 08:38:02] CVMFS is ok
[2024-09-23 08:38:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-23 08:38:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-23 08:38:02] Further information can be found at the LHC@home message board.
[2024-09-23 08:38:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-23 08:38:02] Checking for apptainer binary...
[2024-09-23 08:38:02] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-23 08:38:02] Running /usr/bin/apptainer --version
[2024-09-23 08:38:02] apptainer version 1.3.2-1.el7
[2024-09-23 08:38:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-23 08:38:03] c-204-34.aglt2.org
[2024-09-23 08:38:03] apptainer works
[2024-09-23 08:38:03] Set ATHENA_PROC_NUMBER=8
[2024-09-23 08:38:03] Set ATHENA_CORE_NUMBER=8
[2024-09-23 08:38:03] Starting ATLAS job with PandaID=6342468422
[2024-09-23 08:38:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-23 10:14:16]  *** The last 200 lines of the pilot log: ***
[2024-09-23 10:14:16]  direct_access_wan=False
[2024-09-23 10:14:16]  domain=
[2024-09-23 10:14:16]  filesize=305539
[2024-09-23 10:14:16]  filetype=log
[2024-09-23 10:14:16]  guid=ba2bafa0-9e26-4ad7-99fe-9e4d49eed4d9
[2024-09-23 10:14:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-23 10:14:16]  is_tar=False
[2024-09-23 10:14:16]  lfn=log.41078631._027227.job.log.tgz.1
[2024-09-23 10:14:16]  mtime=0
[2024-09-23 10:14:16]  protocol_id=None
[2024-09-23 10:14:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-23 10:14:16]  replicas=None
[2024-09-23 10:14:16]  scope=mc23_13p6TeV
[2024-09-23 10:14:16]  status=None
[2024-09-23 10:14:16]  status_code=0
[2024-09-23 10:14:16]  storage_token=
[2024-09-23 10:14:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6342468422/log.41078631._027227.job.log.tgz.1
[2024-09-23 10:14:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/33/log.41078631._027227.job.log.tgz.1
[2024-09-23 10:14:16]  workdir=None
[2024-09-23 10:14:16] ]
[2024-09-23 10:14:16] 2024-09-23 14:13:53,622 | INFO     | transferring file log.41078631._027227.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6342468422/log.41078631._027227.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-09-23 10:14:16] 2024-09-23 14:13:53,623 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6342468422/log.41078631._027227.job.log.tgz.1 /tmp/boinchome/slots/0/log.41078631._027227.job
[2024-09-23 10:14:16] 2024-09-23 14:13:53,650 | INFO     | adding to output.list: log.41078631._027227.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/33/log.41078631._027227.job.log.tg
[2024-09-23 10:14:16] 2024-09-23 14:13:53,652 | INFO     | summary of transferred files:
[2024-09-23 10:14:16] 2024-09-23 14:13:53,652 | INFO     |  -- lfn=log.41078631._027227.job.log.tgz.1, status_code=0, status=transferred
[2024-09-23 10:14:16] 2024-09-23 14:13:53,652 | INFO     | stage-out finished correctly
[2024-09-23 10:14:16] 2024-09-23 14:13:55,353 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-23 10:14:16] 2024-09-23 14:13:55,441 | INFO     | job 6342468422 has state=finished
[2024-09-23 10:14:16] 2024-09-23 14:13:55,442 | INFO     | preparing for final server update for job 6342468422 in state='finished'
[2024-09-23 10:14:16] 2024-09-23 14:13:55,442 | INFO     | this job has now completed (state=finished)
[2024-09-23 10:14:16] 2024-09-23 14:13:55,443 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-23 10:14:16] 2024-09-23 14:13:55,443 | INFO     | log transfer has been attempted: DONE
[2024-09-23 10:14:16] 2024-09-23 14:13:55,443 | INFO     | job 6342468422 has finished - writing final server update
[2024-09-23 10:14:16] 2024-09-23 14:13:55,443 | INFO     | total number of processed events: 400 (read)
[2024-09-23 10:14:16] 2024-09-23 14:13:55,445 | INFO     | executing command: lscpu
[2024-09-23 10:14:16] 2024-09-23 14:13:55,476 | INFO     | found 8 cores (4 cores per socket, 2 sockets)
[2024-09-23 10:14:16] 2024-09-23 14:13:55,477 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-23 10:14:16] 2024-09-23 14:13:55,519 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-23 10:14:16] 2024-09-23 14:14:01,183 | INFO     | CPU arch script returned: x86-64-v2
[2024-09-23 10:14:16] 2024-09-23 14:14:01,184 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6342468422/memory_monitor_summary.json (trf name=prmon)
[2024-09-23 10:14:16] 2024-09-23 14:14:01,186 | INFO     | extracted standard info from prmon json
[2024-09-23 10:14:16] 2024-09-23 14:14:01,190 | INFO     | extracted standard memory fields from prmon json
[2024-09-23 10:14:16] 2024-09-23 14:14:01,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-23 10:14:16] 2024-09-23 14:14:01,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-23 10:14:16] 2024-09-23 14:14:01,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-23 10:14:16] 2024-09-23 14:14:01,196 | INFO     | fitting pss+swap vs Time
[2024-09-23 10:14:16] 2024-09-23 14:14:01,196 | INFO     | model: linear, x: [1727095432.0, 1727095493.0, 1727095554.0, 1727095615.0, 1727095676.0, 1727095737.0, 1727095798.0, 1727095859.0, 1727095920.0, 1727095981.0, 1727
[2024-09-23 10:14:16] 2024-09-23 14:14:01,197 | INFO     | sum of square deviations: 204163828.0
[2024-09-23 10:14:16] 2024-09-23 14:14:01,197 | INFO     | sum of deviations: -9115845185.000004
[2024-09-23 10:14:16] 2024-09-23 14:14:01,197 | INFO     | mean x: 1727098055.0
[2024-09-23 10:14:16] 2024-09-23 14:14:01,198 | INFO     | mean y: 2684692.1379310344
[2024-09-23 10:14:16] 2024-09-23 14:14:01,198 | INFO     | -- intersect: 77117022931.79231
[2024-09-23 10:14:16] 2024-09-23 14:14:01,198 | INFO     | intersect: 77117022931.79231
[2024-09-23 10:14:16] 2024-09-23 14:14:01,198 | INFO     | chi2: 0.26222227209563653
[2024-09-23 10:14:16] 2024-09-23 14:14:01,199 | INFO     | -- intersect: 77117022931.79231
[2024-09-23 10:14:16] 2024-09-23 14:14:01,199 | INFO     | current memory leak: -44.65 B/s (using 87 data points, chi2=0.26)
[2024-09-23 10:14:16] 2024-09-23 14:14:01,200 | INFO     | ..............................
[2024-09-23 10:14:16] 2024-09-23 14:14:01,200 | INFO     | . Timing measurements:
[2024-09-23 10:14:16] 2024-09-23 14:14:01,200 | INFO     | . get job = 0 s
[2024-09-23 10:14:16] 2024-09-23 14:14:01,200 | INFO     | . initial setup = 2 s
[2024-09-23 10:14:16] 2024-09-23 14:14:01,200 | INFO     | . payload setup = 7 s
[2024-09-23 10:14:16] 2024-09-23 14:14:01,201 | INFO     | . stage-in = 0 s
[2024-09-23 10:14:16] 2024-09-23 14:14:01,201 | INFO     | . payload execution = 5707 s
[2024-09-23 10:14:16] 2024-09-23 14:14:01,201 | INFO     | . stage-out = 0 s
[2024-09-23 10:14:16] 2024-09-23 14:14:01,201 | INFO     | . log creation = 0 s
[2024-09-23 10:14:16] 2024-09-23 14:14:01,201 | INFO     | ..............................
[2024-09-23 10:14:16] 2024-09-23 14:14:01,264 | WARNING  | process 9892 is no longer using CPU - aborting
[2024-09-23 10:14:16] 2024-09-23 14:14:01,270 | INFO     | aborting job monitoring since job object (job id=6342468422) has expired
[2024-09-23 10:14:16] 2024-09-23 14:14:01,666 | INFO     | 
[2024-09-23 10:14:16] 2024-09-23 14:14:01,666 | INFO     | job summary report
[2024-09-23 10:14:16] 2024-09-23 14:14:01,666 | INFO     | --------------------------------------------------
[2024-09-23 10:14:16] 2024-09-23 14:14:01,667 | INFO     | PanDA job id: 6342468422
[2024-09-23 10:14:16] 2024-09-23 14:14:01,667 | INFO     | task id: 41078631
[2024-09-23 10:14:16] 2024-09-23 14:14:01,667 | INFO     | errors: (none)
[2024-09-23 10:14:16] 2024-09-23 14:14:01,667 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-23 10:14:16] 2024-09-23 14:14:01,667 | INFO     | pilot state: finished 
[2024-09-23 10:14:16] 2024-09-23 14:14:01,667 | INFO     | transexitcode: 0
[2024-09-23 10:14:16] 2024-09-23 14:14:01,668 | INFO     | exeerrorcode: 0
[2024-09-23 10:14:16] 2024-09-23 14:14:01,668 | INFO     | exeerrordiag: 
[2024-09-23 10:14:16] 2024-09-23 14:14:01,668 | INFO     | exitcode: 0
[2024-09-23 10:14:16] 2024-09-23 14:14:01,668 | INFO     | exitmsg: OK
[2024-09-23 10:14:16] 2024-09-23 14:14:01,668 | INFO     | cpuconsumptiontime: 41089 s
[2024-09-23 10:14:16] 2024-09-23 14:14:01,668 | INFO     | nevents: 400
[2024-09-23 10:14:16] 2024-09-23 14:14:01,669 | INFO     | neventsw: 0
[2024-09-23 10:14:16] 2024-09-23 14:14:01,669 | INFO     | pid: 9892
[2024-09-23 10:14:16] 2024-09-23 14:14:01,669 | INFO     | pgrp: 9892
[2024-09-23 10:14:16] 2024-09-23 14:14:01,669 | INFO     | corecount: 8
[2024-09-23 10:14:16] 2024-09-23 14:14:01,669 | INFO     | event service: False
[2024-09-23 10:14:16] 2024-09-23 14:14:01,669 | INFO     | sizes: {0: 2440210, 6: 2440416, 11: 2440444, 5719: 2466872, 5720: 2475832, 5722: 2475888, 5727: 2476186}
[2024-09-23 10:14:16] 2024-09-23 14:14:01,670 | INFO     | --------------------------------------------------
[2024-09-23 10:14:16] 2024-09-23 14:14:01,670 | INFO     | 
[2024-09-23 10:14:16] 2024-09-23 14:14:01,670 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-09-23 10:14:16] 2024-09-23 14:14:01,701 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,701 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,701 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,702 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,702 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,702 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,702 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,702 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,704 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-23 10:14:16] 2024-09-23 14:14:01,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,704 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-23 10:14:16] 2024-09-23 14:14:01,705 | INFO     | job 6342468422 has completed (purged errors)
[2024-09-23 10:14:16] 2024-09-23 14:14:01,705 | INFO     | overall cleanup function is called
[2024-09-23 10:14:16] 2024-09-23 14:14:02,713 | INFO     | --- collectZombieJob: --- 10, [9892]
[2024-09-23 10:14:16] 2024-09-23 14:14:02,713 | INFO     | zombie collector waiting for pid 9892
[2024-09-23 10:14:16] 2024-09-23 14:14:02,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-23 10:14:16] 2024-09-23 14:14:02,720 | INFO     | collected zombie processes
[2024-09-23 10:14:16] 2024-09-23 14:14:02,720 | INFO     | will  attempt to kill all subprocesses of pid=9892
[2024-09-23 10:14:16] 2024-09-23 14:14:02,787 | INFO     | process IDs to be killed: [9892] (in reverse order)
[2024-09-23 10:14:16] 2024-09-23 14:14:02,851 | WARNING  | found no corresponding commands to process id(s)
[2024-09-23 10:14:16] 2024-09-23 14:14:02,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-23 10:14:16] 2024-09-23 14:14:02,855 | INFO     | did not find any defunct processes belonging to 9892
[2024-09-23 10:14:16] 2024-09-23 14:14:02,858 | INFO     | did not find any defunct processes belonging to 9892
[2024-09-23 10:14:16] 2024-09-23 14:14:02,859 | INFO     | ready for new job
[2024-09-23 10:14:16] 2024-09-23 14:14:02,859 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-23 10:14:16] 2024-09-23 14:14:02,861 | INFO     | **************************************
[2024-09-23 10:14:16] 2024-09-23 14:14:02,861 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-23 10:14:16] 2024-09-23 14:14:02,861 | INFO     | **************************************
[2024-09-23 10:14:16] 2024-09-23 14:14:02,861 | INFO     | 
[2024-09-23 10:14:16] 2024-09-23 14:14:02,862 | INFO     | architecture information:
[2024-09-23 10:14:16] 2024-09-23 14:14:02,862 | INFO     | executing command: cat /etc/os-release
[2024-09-23 10:14:16] 2024-09-23 14:14:02,883 | INFO     | cat /etc/os-release:
[2024-09-23 10:14:16] NAME="CentOS Linux"
[2024-09-23 10:14:16] VERSION="7 (Core)"
[2024-09-23 10:14:16] ID="centos"
[2024-09-23 10:14:16] ID_LIKE="rhel fedora"
[2024-09-23 10:14:16] VERSION_ID="7"
[2024-09-23 10:14:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-23 10:14:16] ANSI_COLOR="0;31"
[2024-09-23 10:14:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-23 10:14:16] HOME_URL="https://www.centos.org/"
[2024-09-23 10:14:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-23 10:14:16] 
[2024-09-23 10:14:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-23 10:14:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-23 10:14:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-23 10:14:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-23 10:14:16] 
[2024-09-23 10:14:16] 2024-09-23 14:14:02,884 | INFO     | **************************************
[2024-09-23 10:14:16] 2024-09-23 14:14:03,386 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-09-23 10:14:16] 2024-09-23 14:14:03,409 | INFO     | sufficient remaining disk space (18221105152 B)
[2024-09-23 10:14:16] 2024-09-23 14:14:03,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-23 10:14:16] 2024-09-23 14:14:03,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-23 10:14:16] 2024-09-23 14:14:03,773 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-09-23 10:14:16] 2024-09-23 14:14:03,774 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-09-23 10:14:16] 2024-09-23 14:14:03,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-23 10:14:16] 2024-09-23 14:14:03,774 | INFO     | will abort loop
[2024-09-23 10:14:16] 2024-09-23 14:14:03,840 | INFO     | all data control threads have been joined
[2024-09-23 10:14:16] 2024-09-23 14:14:03,972 | INFO     | all job control threads have been joined
[2024-09-23 10:14:16] 2024-09-23 14:14:04,266 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-23 10:14:16] 2024-09-23 14:14:04,357 | INFO     | all payload control threads have been joined
[2024-09-23 10:14:16] 2024-09-23 14:14:04,408 | INFO     | found 0 job(s) in 20 queues
[2024-09-23 10:14:16] 2024-09-23 14:14:04,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-23 10:14:16] 2024-09-23 14:14:04,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-23 10:14:16] 2024-09-23 14:14:04,415 | INFO     | [job] retrieve thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:04,719 | INFO     | [job] create_data_payload thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:04,780 | INFO     | [job] job monitor thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:04,843 | INFO     | [data] control thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:04,878 | INFO     | [payload] validate_pre thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:04,942 | INFO     | [payload] validate_post thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:04,977 | INFO     | [job] control thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:05,363 | INFO     | [payload] control thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:05,633 | INFO     | [payload] execute_payloads thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:05,716 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:05,798 | INFO     | [job] validate thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:05,800 | INFO     | [data] copytool_in thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:05,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-23 10:14:16] 2024-09-23 14:14:05,966 | INFO     | [payload] failed_post thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:06,272 | INFO     | [data] copytool_out thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:06,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-23 10:14:16] 2024-09-23 14:14:07,327 | INFO     | [job] queue monitor thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:09,958 | INFO     | [data] queue_monitor thread has finished
[2024-09-23 10:14:16] 2024-09-23 14:14:11,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140506099894080)>', '<ExcThread(monitor, started 140505283290880)>']
[2024-09-23 10:14:16] 2024-09-23 14:14:11,441 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-23 10:14:16] 2024-09-23 14:14:11,441 | INFO     | [monitor] control thread has ended
[2024-09-23 10:14:16] 2024-09-23 14:14:16,116 | INFO     | all workflow threads have been joined
[2024-09-23 10:14:16] 2024-09-23 14:14:16,116 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-23 10:14:16] 2024-09-23 14:14:16,117 | INFO     | traces error code: 0
[2024-09-23 10:14:16] 2024-09-23 14:14:16,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-23 10:14:16] 2024-09-23 14:14:16,221 [wrapper] ==== pilot stdout END ====
[2024-09-23 10:14:16] 2024-09-23 14:14:16,226 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-23 10:14:16] 2024-09-23 14:14:16,230 [wrapper] pilotpid: 3410
[2024-09-23 10:14:16] 2024-09-23 14:14:16,235 [wrapper] Pilot exit status: 0
[2024-09-23 10:14:16] 2024-09-23 14:14:16,253 [wrapper] pandaids: 6342468422
[2024-09-23 10:14:16] 2024-09-23 14:14:16,298 [wrapper] cleanup supervisor_pilot 26913 3411
[2024-09-23 10:14:16] 2024-09-23 14:14:16,303 [wrapper] Test setup, not cleaning
[2024-09-23 10:14:16] 2024-09-23 14:14:16,308 [wrapper] ==== wrapper stdout END ====
[2024-09-23 10:14:16] 2024-09-23 14:14:16,313 [wrapper] ==== wrapper stderr END ====
[2024-09-23 10:14:16] 2024-09-23 14:14:16,323 [wrapper] apfmon messages muted
[2024-09-23 10:14:16]  *** Error codes and diagnostics ***
[2024-09-23 10:14:16]     "exeErrorCode": 0,
[2024-09-23 10:14:16]     "exeErrorDiag": "",
[2024-09-23 10:14:16]     "pilotErrorCode": 0,
[2024-09-23 10:14:16]     "pilotErrorDiag": "",
[2024-09-23 10:14:16]  *** Listing of results directory ***
[2024-09-23 10:14:16] total 597952
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas    482533 Sep 23 05:54 pilot3.tar.gz
[2024-09-23 10:14:16] -rwx------ 1 boincer umatlas     33679 Sep 23 06:13 runpilot2-wrapper.sh
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas      5655 Sep 23 06:13 queuedata.json
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas       100 Sep 23 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-23 10:14:16] -rwxr-xr-x 1 boincer umatlas      7986 Sep 23 08:37 run_atlas
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas       105 Sep 23 08:37 job.xml
[2024-09-23 10:14:16] -rw-r--r-- 2 boincer umatlas 443213906 Sep 23 08:38 EVNT.41078629._000956.pool.root.1
[2024-09-23 10:14:16] -rw-r--r-- 2 boincer umatlas     17539 Sep 23 08:38 start_atlas.sh
[2024-09-23 10:14:16] drwxrwx--x 2 boincer umatlas      4096 Sep 23 08:38 shared
[2024-09-23 10:14:16] -rw-r--r-- 2 boincer umatlas    495953 Sep 23 08:38 input.tar.gz
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas         0 Sep 23 08:38 boinc_lockfile
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas      2556 Sep 23 08:38 pandaJob.out
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas       462 Sep 23 08:38 setup.sh.local
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas   1011833 Sep 23 08:38 agis_schedconf.cvmfs.json
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas   1618603 Sep 23 08:38 agis_ddmendpoints.agis.ALL.json
[2024-09-23 10:14:16] drwx------ 4 boincer umatlas      4096 Sep 23 08:38 pilot3
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas      5905 Sep 23 10:10 init_data.xml
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas 163591677 Sep 23 10:13 HITS.41078631._027227.pool.root.1
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas        95 Sep 23 10:13 pilot_heartbeat.json
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas       531 Sep 23 10:13 boinc_task_state.xml
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas      1056 Sep 23 10:13 memory_monitor_summary.json
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas    305539 Sep 23 10:13 log.41078631._027227.job.log.tgz.1
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas      7771 Sep 23 10:14 heartbeat.json
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas        27 Sep 23 10:14 wrapper_checkpoint.txt
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas      4401 Sep 23 10:14 pilotlog.txt
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas    516976 Sep 23 10:14 log.41078631._027227.job.log.1
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas      8192 Sep 23 10:14 boinc_mmap_file
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas       357 Sep 23 10:14 output.list
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas       620 Sep 23 10:14 runtime_log
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas    839680 Sep 23 10:14 result.tar.gz
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas       646 Sep 23 10:14 xI1KDmsFvC6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDm8ghKDmZ8mP5n.diag
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas     11375 Sep 23 10:14 runtime_log.err
[2024-09-23 10:14:16] -rw-r--r-- 1 boincer umatlas     21044 Sep 23 10:14 stderr.txt
[2024-09-23 10:14:16] HITS file was successfully produced:
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas 163591677 Sep 23 10:13 shared/HITS.pool.root.1
[2024-09-23 10:14:16]  *** Contents of shared directory: ***
[2024-09-23 10:14:16] total 593920
[2024-09-23 10:14:16] -rw-r--r-- 2 boincer umatlas 443213906 Sep 23 08:38 ATLAS.root_0
[2024-09-23 10:14:16] -rw-r--r-- 2 boincer umatlas     17539 Sep 23 08:38 start_atlas.sh
[2024-09-23 10:14:16] -rw-r--r-- 2 boincer umatlas    495953 Sep 23 08:38 input.tar.gz
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas 163591677 Sep 23 10:13 HITS.pool.root.1
[2024-09-23 10:14:16] -rw------- 1 boincer umatlas    839680 Sep 23 10:14 result.tar.gz
10:14:17 (32149): run_atlas exited; CPU time 40947.359125
10:14:17 (32149): called boinc_finish(0)

</stderr_txt>
]]>

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