Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
23:45:52 (2454535): wrapper (7.7.26015): starting
23:45:52 (2454535): wrapper: running run_atlas (--nthreads 4)
[2024-09-24 23:45:52] Arguments: --nthreads 4
[2024-09-24 23:45:52] Threads: 4
[2024-09-24 23:45:52] Checking for CVMFS
[2024-09-24 23:45:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-24 23:45:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-24 23:45:53] Running cvmfs_config stat atlas.cern.ch
[2024-09-24 23:45:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-24 23:45:53] 2.11.4.0 12539 5824 62248 137616 0 187 2915777 4096000 909 130560 0 9303245 99.995 1358558 3674 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-09-24 23:45:53] CVMFS is ok
[2024-09-24 23:45:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-24 23:45:53] Checking for apptainer binary...
[2024-09-24 23:45:53] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-24 23:45:53] Running /usr/bin/apptainer --version
[2024-09-24 23:45:53] apptainer version 1.3.3
[2024-09-24 23:45:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-24 23:45:53] TS-P310
[2024-09-24 23:45:53] apptainer works
[2024-09-24 23:45:53] Set ATHENA_PROC_NUMBER=4
[2024-09-24 23:45:53] Set ATHENA_CORE_NUMBER=4
[2024-09-24 23:45:53] Starting ATLAS job with PandaID=6341994247
[2024-09-24 23:45:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-25 01:26:14]  *** The last 200 lines of the pilot log: ***
[2024-09-25 01:26:14]  filetype=log
[2024-09-25 01:26:14]  guid=a991e4ae-4bbe-4234-9c60-5763c6381118
[2024-09-25 01:26:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-25 01:26:14]  is_tar=False
[2024-09-25 01:26:14]  lfn=log.41078631._023883.job.log.tgz.1
[2024-09-25 01:26:14]  mtime=0
[2024-09-25 01:26:14]  protocol_id=None
[2024-09-25 01:26:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-25 01:26:14]  replicas=None
[2024-09-25 01:26:14]  scope=mc23_13p6TeV
[2024-09-25 01:26:14]  status=None
[2024-09-25 01:26:14]  status_code=0
[2024-09-25 01:26:14]  storage_token=
[2024-09-25 01:26:14]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6341994247/log.41078631._023883.job.log.tgz.1
[2024-09-25 01:26:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/db/log.41078631._023883.job.log.tgz.1
[2024-09-25 01:26:14]  workdir=None
[2024-09-25 01:26:14] ]
[2024-09-25 01:26:14] 2024-09-24 23:25:44,562 | INFO     | transferring file log.41078631._023883.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6341994247/log.41078631._023883.job.log.tgz.1 to /var/lib/boinc/slots/
[2024-09-25 01:26:14] 2024-09-24 23:25:44,562 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6341994247/log.41078631._023883.job.log.tgz.1 /var/lib/boinc/slots/0/log.41078631._023883.job
[2024-09-25 01:26:14] 2024-09-24 23:25:44,574 | INFO     | adding to output.list: log.41078631._023883.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/db/log.41078631._023883.job.log.tg
[2024-09-25 01:26:14] 2024-09-24 23:25:44,575 | INFO     | summary of transferred files:
[2024-09-25 01:26:14] 2024-09-24 23:25:44,575 | INFO     |  -- lfn=log.41078631._023883.job.log.tgz.1, status_code=0, status=transferred
[2024-09-25 01:26:14] 2024-09-24 23:25:44,575 | INFO     | stage-out finished correctly
[2024-09-25 01:26:14] 2024-09-24 23:25:46,793 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-25 01:26:14] 2024-09-24 23:25:47,711 | WARNING  | process 2464545 is no longer using CPU - aborting
[2024-09-25 01:26:14] 2024-09-24 23:25:49,112 | INFO     | job 6341994247 has state=finished
[2024-09-25 01:26:14] 2024-09-24 23:25:49,112 | INFO     | preparing for final server update for job 6341994247 in state='finished'
[2024-09-25 01:26:14] 2024-09-24 23:25:49,705 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-09-25 01:26:14] 2024-09-24 23:25:49,706 | INFO     | this job has now completed (state=finished)
[2024-09-25 01:26:14] 2024-09-24 23:25:49,706 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-25 01:26:14] 2024-09-24 23:25:49,706 | INFO     | log transfer has been attempted: DONE
[2024-09-25 01:26:14] 2024-09-24 23:25:49,706 | INFO     | job 6341994247 has finished - writing final server update
[2024-09-25 01:26:14] 2024-09-24 23:25:49,706 | INFO     | total number of processed events: 400 (read)
[2024-09-25 01:26:14] 2024-09-24 23:25:49,707 | INFO     | executing command: lscpu
[2024-09-25 01:26:14] 2024-09-24 23:25:49,721 | INFO     | found 4 cores (4 cores per socket, 1 sockets)
[2024-09-25 01:26:14] 2024-09-24 23:25:49,721 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-25 01:26:14] 2024-09-24 23:25:49,739 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-25 01:26:14] 2024-09-24 23:25:50,212 | INFO     | monitor loop #473: job 0:6341994247 is in state 'finished'
[2024-09-25 01:26:14] 2024-09-24 23:25:50,212 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-25 01:26:14] 2024-09-24 23:25:52,715 | INFO     | monitor loop #474: job 0:6341994247 is in state 'finished'
[2024-09-25 01:26:14] 2024-09-24 23:25:52,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-25 01:26:14] 2024-09-24 23:25:53,604 | INFO     | CPU arch script returned: x86-64-v3
[2024-09-25 01:26:14] 2024-09-24 23:25:53,604 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6341994247/memory_monitor_summary.json (trf name=prmon)
[2024-09-25 01:26:14] 2024-09-24 23:25:53,605 | INFO     | extracted standard info from prmon json
[2024-09-25 01:26:14] 2024-09-24 23:25:53,605 | INFO     | extracted standard memory fields from prmon json
[2024-09-25 01:26:14] 2024-09-24 23:25:53,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-25 01:26:14] 2024-09-24 23:25:53,606 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-25 01:26:14] 2024-09-24 23:25:53,606 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-25 01:26:14] 2024-09-24 23:25:53,607 | INFO     | fitting pss+swap vs Time
[2024-09-25 01:26:14] 2024-09-24 23:25:53,607 | INFO     | model: linear, x: [1727214686.0, 1727214747.0, 1727214808.0, 1727214869.0, 1727214930.0, 1727214991.0, 1727215052.0, 1727215113.0, 1727215174.0, 1727215235.0, 1727
[2024-09-25 01:26:14] 2024-09-24 23:25:53,607 | INFO     | sum of square deviations: 233641590.0
[2024-09-25 01:26:14] 2024-09-24 23:25:53,608 | INFO     | sum of deviations: -3584185905.9999995
[2024-09-25 01:26:14] 2024-09-24 23:25:53,608 | INFO     | mean x: 1727217431.0
[2024-09-25 01:26:14] 2024-09-24 23:25:53,608 | INFO     | mean y: 2413625.241758242
[2024-09-25 01:26:14] 2024-09-24 23:25:53,608 | INFO     | -- intersect: 26498845073.03205
[2024-09-25 01:26:14] 2024-09-24 23:25:53,608 | INFO     | intersect: 26498845073.03205
[2024-09-25 01:26:14] 2024-09-24 23:25:53,608 | INFO     | chi2: 0.047088665322893616
[2024-09-25 01:26:14] 2024-09-24 23:25:53,608 | INFO     | -- intersect: 26498845073.03205
[2024-09-25 01:26:14] 2024-09-24 23:25:53,608 | INFO     | current memory leak: -15.34 B/s (using 91 data points, chi2=0.05)
[2024-09-25 01:26:14] 2024-09-24 23:25:53,609 | INFO     | ..............................
[2024-09-25 01:26:14] 2024-09-24 23:25:53,609 | INFO     | . Timing measurements:
[2024-09-25 01:26:14] 2024-09-24 23:25:53,609 | INFO     | . get job = 0 s
[2024-09-25 01:26:14] 2024-09-24 23:25:53,609 | INFO     | . initial setup = 2 s
[2024-09-25 01:26:14] 2024-09-24 23:25:53,609 | INFO     | . payload setup = 3 s
[2024-09-25 01:26:14] 2024-09-24 23:25:53,609 | INFO     | . stage-in = 0 s
[2024-09-25 01:26:14] 2024-09-24 23:25:53,609 | INFO     | . payload execution = 5962 s
[2024-09-25 01:26:14] 2024-09-24 23:25:53,609 | INFO     | . stage-out = 0 s
[2024-09-25 01:26:14] 2024-09-24 23:25:53,609 | INFO     | . log creation = 0 s
[2024-09-25 01:26:14] 2024-09-24 23:25:53,609 | INFO     | ..............................
[2024-09-25 01:26:14] 2024-09-24 23:25:53,676 | INFO     | 
[2024-09-25 01:26:14] 2024-09-24 23:25:53,676 | INFO     | job summary report
[2024-09-25 01:26:14] 2024-09-24 23:25:53,676 | INFO     | --------------------------------------------------
[2024-09-25 01:26:14] 2024-09-24 23:25:53,676 | INFO     | PanDA job id: 6341994247
[2024-09-25 01:26:14] 2024-09-24 23:25:53,676 | INFO     | task id: 41078631
[2024-09-25 01:26:14] 2024-09-24 23:25:53,676 | INFO     | errors: (none)
[2024-09-25 01:26:14] 2024-09-24 23:25:53,676 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-25 01:26:14] 2024-09-24 23:25:53,676 | INFO     | pilot state: finished 
[2024-09-25 01:26:14] 2024-09-24 23:25:53,676 | INFO     | transexitcode: 0
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | exeerrorcode: 0
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | exeerrordiag: 
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | exitcode: 0
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | exitmsg: OK
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | cpuconsumptiontime: 22145 s
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | nevents: 400
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | neventsw: 0
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | pid: 2464545
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | pgrp: 2464545
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | corecount: 4
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | event service: False
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | sizes: {0: 2440210, 2: 2440416, 11: 2440444, 5969: 2467244, 5970: 2476204, 5972: 2476260, 5979: 2476558}
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | --------------------------------------------------
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | 
[2024-09-25 01:26:14] 2024-09-24 23:25:53,677 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-09-25 01:26:14] 2024-09-24 23:25:53,690 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,690 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,690 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,690 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-25 01:26:14] 2024-09-24 23:25:53,691 | INFO     | job 6341994247 has completed (purged errors)
[2024-09-25 01:26:14] 2024-09-24 23:25:53,692 | INFO     | overall cleanup function is called
[2024-09-25 01:26:14] 2024-09-24 23:25:54,698 | INFO     | --- collectZombieJob: --- 10, [2464545]
[2024-09-25 01:26:14] 2024-09-24 23:25:54,698 | INFO     | zombie collector waiting for pid 2464545
[2024-09-25 01:26:14] 2024-09-24 23:25:54,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-25 01:26:14] 2024-09-24 23:25:54,699 | INFO     | collected zombie processes
[2024-09-25 01:26:14] 2024-09-24 23:25:54,699 | INFO     | will  attempt to kill all subprocesses of pid=2464545
[2024-09-25 01:26:14] 2024-09-24 23:25:54,742 | INFO     | process IDs to be killed: [2464545] (in reverse order)
[2024-09-25 01:26:14] 2024-09-24 23:25:54,800 | WARNING  | found no corresponding commands to process id(s)
[2024-09-25 01:26:14] 2024-09-24 23:25:54,800 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-25 01:26:14] 2024-09-24 23:25:54,802 | INFO     | did not find any defunct processes belonging to 2464545
[2024-09-25 01:26:14] 2024-09-24 23:25:54,804 | INFO     | did not find any defunct processes belonging to 2464545
[2024-09-25 01:26:14] 2024-09-24 23:25:54,804 | INFO     | ready for new job
[2024-09-25 01:26:14] 2024-09-24 23:25:54,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-25 01:26:14] 2024-09-24 23:25:54,805 | INFO     | **************************************
[2024-09-25 01:26:14] 2024-09-24 23:25:54,805 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-25 01:26:14] 2024-09-24 23:25:54,805 | INFO     | **************************************
[2024-09-25 01:26:14] 2024-09-24 23:25:54,806 | INFO     | 
[2024-09-25 01:26:14] 2024-09-24 23:25:54,806 | INFO     | architecture information:
[2024-09-25 01:26:14] 2024-09-24 23:25:54,806 | INFO     | executing command: cat /etc/os-release
[2024-09-25 01:26:14] 2024-09-24 23:25:54,815 | INFO     | cat /etc/os-release:
[2024-09-25 01:26:14] NAME="CentOS Linux"
[2024-09-25 01:26:14] VERSION="7 (Core)"
[2024-09-25 01:26:14] ID="centos"
[2024-09-25 01:26:14] ID_LIKE="rhel fedora"
[2024-09-25 01:26:14] VERSION_ID="7"
[2024-09-25 01:26:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-25 01:26:14] ANSI_COLOR="0;31"
[2024-09-25 01:26:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-25 01:26:14] HOME_URL="https://www.centos.org/"
[2024-09-25 01:26:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-25 01:26:14] 
[2024-09-25 01:26:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-25 01:26:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-25 01:26:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-25 01:26:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-25 01:26:14] 
[2024-09-25 01:26:14] 2024-09-24 23:25:54,816 | INFO     | **************************************
[2024-09-25 01:26:14] 2024-09-24 23:25:55,319 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-09-25 01:26:14] 2024-09-24 23:25:55,329 | INFO     | sufficient remaining disk space (74221355008 B)
[2024-09-25 01:26:14] 2024-09-24 23:25:55,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-25 01:26:14] 2024-09-24 23:25:55,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-25 01:26:14] 2024-09-24 23:25:55,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-25 01:26:14] 2024-09-24 23:25:55,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-25 01:26:14] 2024-09-24 23:25:55,758 | INFO     | all payload control threads have been joined
[2024-09-25 01:26:14] 2024-09-24 23:25:56,155 | INFO     | all data control threads have been joined
[2024-09-25 01:26:14] 2024-09-24 23:25:56,222 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-25 01:26:14] 2024-09-24 23:25:56,222 | INFO     | aborting loop
[2024-09-25 01:26:14] 2024-09-24 23:25:56,249 | INFO     | found 0 job(s) in 20 queues
[2024-09-25 01:26:14] 2024-09-24 23:25:56,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-25 01:26:14] 2024-09-24 23:25:56,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-25 01:26:14] 2024-09-24 23:25:56,332 | INFO     | [job] retrieve thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:56,334 | INFO     | [job] queue monitor thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:56,346 | INFO     | [payload] failed_post thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:56,348 | INFO     | [payload] validate_pre thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:56,408 | INFO     | all job control threads have been joined
[2024-09-25 01:26:14] 2024-09-24 23:25:56,520 | INFO     | [payload] execute_payloads thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:56,764 | INFO     | [payload] control thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:57,161 | INFO     | [data] control thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:57,225 | INFO     | [job] job monitor thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:57,309 | INFO     | [data] copytool_in thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:57,332 | INFO     | [data] copytool_out thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:57,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-25 01:26:14] 2024-09-24 23:25:57,382 | INFO     | [payload] validate_post thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:57,412 | INFO     | [job] control thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:57,525 | INFO     | [job] validate thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:25:57,707 | INFO     | [job] create_data_payload thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:26:01,368 | INFO     | [data] queue_monitor thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:26:06,022 | INFO     | job.realtimelogging is not enabled
[2024-09-25 01:26:14] 2024-09-24 23:26:07,028 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-25 01:26:14] 2024-09-24 23:26:09,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140206274492224)>', '<ExcThread(monitor, started 140205507995392)>']
[2024-09-25 01:26:14] 2024-09-24 23:26:09,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-25 01:26:14] 2024-09-24 23:26:09,302 | INFO     | [monitor] control thread has ended
[2024-09-25 01:26:14] 2024-09-24 23:26:14,122 | INFO     | all workflow threads have been joined
[2024-09-25 01:26:14] 2024-09-24 23:26:14,122 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-25 01:26:14] 2024-09-24 23:26:14,123 | INFO     | traces error code: 0
[2024-09-25 01:26:14] 2024-09-24 23:26:14,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-25 01:26:14] 2024-09-24 23:26:14,194 [wrapper] ==== pilot stdout END ====
[2024-09-25 01:26:14] 2024-09-24 23:26:14,196 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-25 01:26:14] 2024-09-24 23:26:14,198 [wrapper] pilotpid: 2458165
[2024-09-25 01:26:14] 2024-09-24 23:26:14,200 [wrapper] Pilot exit status: 0
[2024-09-25 01:26:14] 2024-09-24 23:26:14,206 [wrapper] pandaids: 6341994247
[2024-09-25 01:26:14] 2024-09-24 23:26:14,223 [wrapper] cleanup supervisor_pilot 2488242 2458166
[2024-09-25 01:26:14] 2024-09-24 23:26:14,225 [wrapper] Test setup, not cleaning
[2024-09-25 01:26:14] 2024-09-24 23:26:14,226 [wrapper] ==== wrapper stdout END ====
[2024-09-25 01:26:14] 2024-09-24 23:26:14,228 [wrapper] ==== wrapper stderr END ====
[2024-09-25 01:26:14] 2024-09-24 23:26:14,232 [wrapper] apfmon messages muted
[2024-09-25 01:26:14]  *** Error codes and diagnostics ***
[2024-09-25 01:26:14]     "exeErrorCode": 0,
[2024-09-25 01:26:14]     "exeErrorDiag": "",
[2024-09-25 01:26:14]     "pilotErrorCode": 0,
[2024-09-25 01:26:14]     "pilotErrorDiag": "",
[2024-09-25 01:26:14]  *** Listing of results directory ***
[2024-09-25 01:26:14] insgesamt 598196
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc    482533 23. Sep 04:51 pilot3.tar.gz
[2024-09-25 01:26:14] -rwx------ 1 boinc boinc     33679 23. Sep 05:11 runpilot2-wrapper.sh
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc      5655 23. Sep 05:11 queuedata.json
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc       100 24. Sep 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-25 01:26:14] -rwxr-xr-x 1 boinc boinc      7986 24. Sep 23:45 run_atlas
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc       105 24. Sep 23:45 job.xml
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc      6721 24. Sep 23:45 init_data.xml
[2024-09-25 01:26:14] -rw-r--r-- 2 boinc boinc 441415439 24. Sep 23:45 EVNT.41078629._000846.pool.root.1
[2024-09-25 01:26:14] -rw-r--r-- 2 boinc boinc     17539 24. Sep 23:45 start_atlas.sh
[2024-09-25 01:26:14] drwxrwx--x 2 boinc boinc      4096 24. Sep 23:45 shared
[2024-09-25 01:26:14] -rw-r--r-- 2 boinc boinc    495952 24. Sep 23:45 input.tar.gz
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc         0 24. Sep 23:45 boinc_lockfile
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc      2556 24. Sep 23:45 pandaJob.out
[2024-09-25 01:26:14] -rw------- 1 boinc boinc       461 24. Sep 23:45 setup.sh.local
[2024-09-25 01:26:14] -rw------- 1 boinc boinc   1011802 24. Sep 23:45 agis_schedconf.cvmfs.json
[2024-09-25 01:26:14] -rw------- 1 boinc boinc   1618603 24. Sep 23:45 agis_ddmendpoints.agis.ALL.json
[2024-09-25 01:26:14] drwx------ 4 boinc boinc      4096 24. Sep 23:46 pilot3
[2024-09-25 01:26:14] -rw------- 1 boinc boinc        95 25. Sep 01:25 pilot_heartbeat.json
[2024-09-25 01:26:14] -rw------- 1 boinc boinc 165638769 25. Sep 01:25 HITS.41078631._023883.pool.root.1
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc       530 25. Sep 01:25 boinc_task_state.xml
[2024-09-25 01:26:14] -rw------- 1 boinc boinc      1017 25. Sep 01:25 memory_monitor_summary.json
[2024-09-25 01:26:14] -rw------- 1 boinc boinc    255145 25. Sep 01:25 log.41078631._023883.job.log.tgz.1
[2024-09-25 01:26:14] -rw------- 1 boinc boinc      7662 25. Sep 01:25 heartbeat.json
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc        27 25. Sep 01:26 wrapper_checkpoint.txt
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc      8192 25. Sep 01:26 boinc_mmap_file
[2024-09-25 01:26:14] -rw------- 1 boinc boinc      4287 25. Sep 01:26 pilotlog.txt
[2024-09-25 01:26:14] -rw------- 1 boinc boinc    564622 25. Sep 01:26 log.41078631._023883.job.log.1
[2024-09-25 01:26:14] -rw------- 1 boinc boinc       357 25. Sep 01:26 output.list
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc       620 25. Sep 01:26 runtime_log
[2024-09-25 01:26:14] -rw------- 1 boinc boinc    839680 25. Sep 01:26 result.tar.gz
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc     11334 25. Sep 01:26 runtime_log.err
[2024-09-25 01:26:14] -rw------- 1 boinc boinc       631 25. Sep 01:26 o5YNDmdfoC6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDm1rgKDmJOTq0m.diag
[2024-09-25 01:26:14] -rw-r--r-- 1 boinc boinc     21012 25. Sep 01:26 stderr.txt
[2024-09-25 01:26:14] HITS file was successfully produced:
[2024-09-25 01:26:14] -rw------- 1 boinc boinc 165638769 25. Sep 01:25 shared/HITS.pool.root.1
[2024-09-25 01:26:14]  *** Contents of shared directory: ***
[2024-09-25 01:26:14] insgesamt 594168
[2024-09-25 01:26:14] -rw-r--r-- 2 boinc boinc 441415439 24. Sep 23:45 ATLAS.root_0
[2024-09-25 01:26:14] -rw-r--r-- 2 boinc boinc     17539 24. Sep 23:45 start_atlas.sh
[2024-09-25 01:26:14] -rw-r--r-- 2 boinc boinc    495952 24. Sep 23:45 input.tar.gz
[2024-09-25 01:26:14] -rw------- 1 boinc boinc 165638769 25. Sep 01:25 HITS.pool.root.1
[2024-09-25 01:26:14] -rw------- 1 boinc boinc    839680 25. Sep 01:26 result.tar.gz
01:26:15 (2454535): run_atlas exited; CPU time 22136.485601
01:26:15 (2454535): called boinc_finish(0)

</stderr_txt>
]]>

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