Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:23:24 (237875): wrapper (7.7.26015): starting
21:23:24 (237875): wrapper: running run_atlas (--nthreads 8)
[2024-09-22 21:23:24] Arguments: --nthreads 8
[2024-09-22 21:23:24] Threads: 8
[2024-09-22 21:23:24] Checking for CVMFS
[2024-09-22 21:23:25] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-22 21:23:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-22 21:23:25] Running cvmfs_config stat atlas.cern.ch
[2024-09-22 21:23:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-22 21:23:25] 2.11.2.0 74629 83301 228576 137541 3 188 17263232 18432001 8041 130560 0 389182186 99.524 382410139 39551 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-09-22 21:23:25] CVMFS is ok
[2024-09-22 21:23:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-22 21:23:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-22 21:23:25] Further information can be found at the LHC@home message board.
[2024-09-22 21:23:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-22 21:23:25] Checking for apptainer binary...
[2024-09-22 21:23:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-22 21:23:25] Running /usr/bin/apptainer --version
[2024-09-22 21:23:25] apptainer version 1.3.2-1.el7
[2024-09-22 21:23:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-22 21:23:26] c-211-35-3.aglt2.org
[2024-09-22 21:23:26] apptainer works
[2024-09-22 21:23:26] Set ATHENA_PROC_NUMBER=8
[2024-09-22 21:23:26] Set ATHENA_CORE_NUMBER=8
[2024-09-22 21:23:26] Starting ATLAS job with PandaID=6341679962
[2024-09-22 21:23:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-22 22:16:43]  *** The last 200 lines of the pilot log: ***
[2024-09-22 22:16:43]  filetype=log
[2024-09-22 22:16:43]  guid=fe9c1742-4df0-4d93-ae3e-6433d94228b9
[2024-09-22 22:16:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-22 22:16:43]  is_tar=False
[2024-09-22 22:16:43]  lfn=log.41078631._021032.job.log.tgz.1
[2024-09-22 22:16:43]  mtime=0
[2024-09-22 22:16:43]  protocol_id=None
[2024-09-22 22:16:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-22 22:16:43]  replicas=None
[2024-09-22 22:16:43]  scope=mc23_13p6TeV
[2024-09-22 22:16:43]  status=None
[2024-09-22 22:16:43]  status_code=0
[2024-09-22 22:16:43]  storage_token=
[2024-09-22 22:16:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6341679962/log.41078631._021032.job.log.tgz.1
[2024-09-22 22:16:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/72/log.41078631._021032.job.log.tgz.1
[2024-09-22 22:16:43]  workdir=None
[2024-09-22 22:16:43] ]
[2024-09-22 22:16:43] 2024-09-23 02:16:20,001 | INFO     | transferring file log.41078631._021032.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6341679962/log.41078631._021032.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-09-22 22:16:43] 2024-09-23 02:16:20,001 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6341679962/log.41078631._021032.job.log.tgz.1 /tmp/boinchome/slots/0/log.41078631._021032.job
[2024-09-22 22:16:43] 2024-09-23 02:16:20,030 | INFO     | adding to output.list: log.41078631._021032.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/72/log.41078631._021032.job.log.tg
[2024-09-22 22:16:43] 2024-09-23 02:16:20,031 | INFO     | summary of transferred files:
[2024-09-22 22:16:43] 2024-09-23 02:16:20,031 | INFO     |  -- lfn=log.41078631._021032.job.log.tgz.1, status_code=0, status=transferred
[2024-09-22 22:16:43] 2024-09-23 02:16:20,031 | INFO     | stage-out finished correctly
[2024-09-22 22:16:43] 2024-09-23 02:16:22,770 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-22 22:16:43] 2024-09-23 02:16:23,594 | WARNING  | process 248056 is no longer using CPU - aborting
[2024-09-22 22:16:43] 2024-09-23 02:16:25,771 | INFO     | job 6341679962 has state=finished
[2024-09-22 22:16:43] 2024-09-23 02:16:25,771 | INFO     | preparing for final server update for job 6341679962 in state='finished'
[2024-09-22 22:16:43] 2024-09-23 02:16:25,772 | INFO     | this job has now completed (state=finished)
[2024-09-22 22:16:43] 2024-09-23 02:16:25,772 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-22 22:16:43] 2024-09-23 02:16:25,772 | INFO     | log transfer has been attempted: DONE
[2024-09-22 22:16:43] 2024-09-23 02:16:25,772 | INFO     | job 6341679962 has finished - writing final server update
[2024-09-22 22:16:43] 2024-09-23 02:16:25,773 | INFO     | total number of processed events: 400 (read)
[2024-09-22 22:16:43] 2024-09-23 02:16:25,781 | INFO     | executing command: lscpu
[2024-09-22 22:16:43] 2024-09-23 02:16:25,845 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-09-22 22:16:43] 2024-09-23 02:16:25,846 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-22 22:16:43] 2024-09-23 02:16:25,913 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-22 22:16:43] 2024-09-23 02:16:26,098 | INFO     | monitor loop #251: job 0:6341679962 is in state 'finished'
[2024-09-22 22:16:43] 2024-09-23 02:16:26,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 22:16:43] 2024-09-23 02:16:28,600 | INFO     | monitor loop #252: job 0:6341679962 is in state 'finished'
[2024-09-22 22:16:43] 2024-09-23 02:16:28,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 22:16:43] 2024-09-23 02:16:29,110 | INFO     | CPU arch script returned: x86-64-v4
[2024-09-22 22:16:43] 2024-09-23 02:16:29,111 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6341679962/memory_monitor_summary.json (trf name=prmon)
[2024-09-22 22:16:43] 2024-09-23 02:16:29,112 | INFO     | extracted standard info from prmon json
[2024-09-22 22:16:43] 2024-09-23 02:16:29,112 | INFO     | extracted standard memory fields from prmon json
[2024-09-22 22:16:43] 2024-09-23 02:16:29,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-22 22:16:43] 2024-09-23 02:16:29,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-22 22:16:43] 2024-09-23 02:16:29,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-22 22:16:43] 2024-09-23 02:16:29,115 | INFO     | fitting pss+swap vs Time
[2024-09-22 22:16:43] 2024-09-23 02:16:29,115 | INFO     | model: linear, x: [1727054943.0, 1727055004.0, 1727055065.0, 1727055126.0, 1727055187.0, 1727055248.0, 1727055309.0, 1727055370.0, 1727055431.0, 1727055492.0, 1727
[2024-09-22 22:16:43] 2024-09-23 02:16:29,115 | INFO     | sum of square deviations: 28242390.0
[2024-09-22 22:16:43] 2024-09-23 02:16:29,116 | INFO     | sum of deviations: 13005845685.0
[2024-09-22 22:16:43] 2024-09-23 02:16:29,116 | INFO     | mean x: 1727056285.0
[2024-09-22 22:16:43] 2024-09-23 02:16:29,116 | INFO     | mean y: 2350428.355555556
[2024-09-22 22:16:43] 2024-09-23 02:16:29,116 | INFO     | -- intersect: -795320833339.7101
[2024-09-22 22:16:43] 2024-09-23 02:16:29,116 | INFO     | intersect: -795320833339.7101
[2024-09-22 22:16:43] 2024-09-23 02:16:29,117 | INFO     | chi2: 1.7785358173979575
[2024-09-22 22:16:43] 2024-09-23 02:16:29,117 | INFO     | -- intersect: -795320833339.7101
[2024-09-22 22:16:43] 2024-09-23 02:16:29,117 | INFO     | current memory leak: 460.51 B/s (using 45 data points, chi2=1.78)
[2024-09-22 22:16:43] 2024-09-23 02:16:29,117 | INFO     | ..............................
[2024-09-22 22:16:43] 2024-09-23 02:16:29,117 | INFO     | . Timing measurements:
[2024-09-22 22:16:43] 2024-09-23 02:16:29,118 | INFO     | . get job = 0 s
[2024-09-22 22:16:43] 2024-09-23 02:16:29,118 | INFO     | . initial setup = 2 s
[2024-09-22 22:16:43] 2024-09-23 02:16:29,118 | INFO     | . payload setup = 5 s
[2024-09-22 22:16:43] 2024-09-23 02:16:29,118 | INFO     | . stage-in = 0 s
[2024-09-22 22:16:43] 2024-09-23 02:16:29,118 | INFO     | . payload execution = 3140 s
[2024-09-22 22:16:43] 2024-09-23 02:16:29,118 | INFO     | . stage-out = 0 s
[2024-09-22 22:16:43] 2024-09-23 02:16:29,118 | INFO     | . log creation = 0 s
[2024-09-22 22:16:43] 2024-09-23 02:16:29,118 | INFO     | ..............................
[2024-09-22 22:16:43] 2024-09-23 02:16:29,209 | INFO     | 
[2024-09-22 22:16:43] 2024-09-23 02:16:29,209 | INFO     | job summary report
[2024-09-22 22:16:43] 2024-09-23 02:16:29,209 | INFO     | --------------------------------------------------
[2024-09-22 22:16:43] 2024-09-23 02:16:29,209 | INFO     | PanDA job id: 6341679962
[2024-09-22 22:16:43] 2024-09-23 02:16:29,209 | INFO     | task id: 41078631
[2024-09-22 22:16:43] 2024-09-23 02:16:29,209 | INFO     | errors: (none)
[2024-09-22 22:16:43] 2024-09-23 02:16:29,209 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-22 22:16:43] 2024-09-23 02:16:29,209 | INFO     | pilot state: finished 
[2024-09-22 22:16:43] 2024-09-23 02:16:29,209 | INFO     | transexitcode: 0
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | exeerrorcode: 0
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | exeerrordiag: 
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | exitcode: 0
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | exitmsg: OK
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | cpuconsumptiontime: 18388 s
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | nevents: 400
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | neventsw: 0
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | pid: 248056
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | pgrp: 248056
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | corecount: 8
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | event service: False
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | sizes: {0: 2440210, 3: 2440416, 11: 2440444, 3149: 2465952, 3150: 2474912, 3153: 2474968, 3160: 2475266}
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | --------------------------------------------------
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | 
[2024-09-22 22:16:43] 2024-09-23 02:16:29,210 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-09-22 22:16:43] 2024-09-23 02:16:29,238 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,238 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,238 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,238 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | job 6341679962 has completed (purged errors)
[2024-09-22 22:16:43] 2024-09-23 02:16:29,239 | INFO     | overall cleanup function is called
[2024-09-22 22:16:43] 2024-09-23 02:16:30,247 | INFO     | --- collectZombieJob: --- 10, [248056]
[2024-09-22 22:16:43] 2024-09-23 02:16:30,247 | INFO     | zombie collector waiting for pid 248056
[2024-09-22 22:16:43] 2024-09-23 02:16:30,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-22 22:16:43] 2024-09-23 02:16:30,248 | INFO     | collected zombie processes
[2024-09-22 22:16:43] 2024-09-23 02:16:30,248 | INFO     | will  attempt to kill all subprocesses of pid=248056
[2024-09-22 22:16:43] 2024-09-23 02:16:30,361 | INFO     | process IDs to be killed: [248056] (in reverse order)
[2024-09-22 22:16:43] 2024-09-23 02:16:30,471 | WARNING  | found no corresponding commands to process id(s)
[2024-09-22 22:16:43] 2024-09-23 02:16:30,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-22 22:16:43] 2024-09-23 02:16:30,483 | INFO     | did not find any defunct processes belonging to 248056
[2024-09-22 22:16:43] 2024-09-23 02:16:30,492 | INFO     | did not find any defunct processes belonging to 248056
[2024-09-22 22:16:43] 2024-09-23 02:16:30,492 | INFO     | ready for new job
[2024-09-22 22:16:43] 2024-09-23 02:16:30,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-22 22:16:43] 2024-09-23 02:16:30,494 | INFO     | **************************************
[2024-09-22 22:16:43] 2024-09-23 02:16:30,494 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-22 22:16:43] 2024-09-23 02:16:30,494 | INFO     | **************************************
[2024-09-22 22:16:43] 2024-09-23 02:16:30,494 | INFO     | 
[2024-09-22 22:16:43] 2024-09-23 02:16:30,500 | INFO     | architecture information:
[2024-09-22 22:16:43] 2024-09-23 02:16:30,500 | INFO     | executing command: cat /etc/os-release
[2024-09-22 22:16:43] 2024-09-23 02:16:30,518 | INFO     | cat /etc/os-release:
[2024-09-22 22:16:43] NAME="CentOS Linux"
[2024-09-22 22:16:43] VERSION="7 (Core)"
[2024-09-22 22:16:43] ID="centos"
[2024-09-22 22:16:43] ID_LIKE="rhel fedora"
[2024-09-22 22:16:43] VERSION_ID="7"
[2024-09-22 22:16:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-22 22:16:43] ANSI_COLOR="0;31"
[2024-09-22 22:16:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-22 22:16:43] HOME_URL="https://www.centos.org/"
[2024-09-22 22:16:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-22 22:16:43] 
[2024-09-22 22:16:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-22 22:16:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-22 22:16:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-22 22:16:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-22 22:16:43] 
[2024-09-22 22:16:43] 2024-09-23 02:16:30,518 | INFO     | **************************************
[2024-09-22 22:16:43] 2024-09-23 02:16:31,022 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-09-22 22:16:43] 2024-09-23 02:16:31,046 | INFO     | sufficient remaining disk space (100106502144 B)
[2024-09-22 22:16:43] 2024-09-23 02:16:31,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-22 22:16:43] 2024-09-23 02:16:31,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-22 22:16:43] 2024-09-23 02:16:31,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-22 22:16:43] 2024-09-23 02:16:31,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-22 22:16:43] 2024-09-23 02:16:31,103 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-09-22 22:16:43] 2024-09-23 02:16:31,103 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-09-22 22:16:43] 2024-09-23 02:16:31,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-22 22:16:43] 2024-09-23 02:16:31,103 | INFO     | will abort loop
[2024-09-22 22:16:43] 2024-09-23 02:16:31,181 | INFO     | found 0 job(s) in 20 queues
[2024-09-22 22:16:43] 2024-09-23 02:16:31,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-22 22:16:43] 2024-09-23 02:16:31,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-22 22:16:43] 2024-09-23 02:16:31,671 | INFO     | all job control threads have been joined
[2024-09-22 22:16:43] 2024-09-23 02:16:31,967 | INFO     | all data control threads have been joined
[2024-09-22 22:16:43] 2024-09-23 02:16:32,053 | INFO     | [job] retrieve thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:32,053 | INFO     | [job] queue monitor thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:32,109 | INFO     | [job] job monitor thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:32,145 | INFO     | all payload control threads have been joined
[2024-09-22 22:16:43] 2024-09-23 02:16:32,255 | INFO     | [payload] validate_post thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:32,539 | INFO     | [job] validate thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:32,602 | INFO     | [job] create_data_payload thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:32,677 | INFO     | [job] control thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:32,717 | INFO     | [payload] validate_pre thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:32,774 | INFO     | [payload] failed_post thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:32,870 | INFO     | [payload] execute_payloads thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:32,971 | INFO     | [data] control thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:33,054 | INFO     | [data] copytool_out thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:33,150 | INFO     | [payload] control thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:33,230 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:33,292 | INFO     | [data] copytool_in thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:33,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-22 22:16:43] 2024-09-23 02:16:37,376 | INFO     | [data] queue_monitor thread has finished
[2024-09-22 22:16:43] 2024-09-23 02:16:38,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455640205120)>', '<ExcThread(monitor, started 140455077467904)>']
[2024-09-22 22:16:43] 2024-09-23 02:16:39,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-22 22:16:43] 2024-09-23 02:16:39,218 | INFO     | [monitor] control thread has ended
[2024-09-22 22:16:43] 2024-09-23 02:16:43,299 | INFO     | all workflow threads have been joined
[2024-09-22 22:16:43] 2024-09-23 02:16:43,299 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-22 22:16:43] 2024-09-23 02:16:43,300 | INFO     | traces error code: 0
[2024-09-22 22:16:43] 2024-09-23 02:16:43,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-22 22:16:43] 2024-09-23 02:16:43,413 [wrapper] ==== pilot stdout END ====
[2024-09-22 22:16:43] 2024-09-23 02:16:43,417 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-22 22:16:43] 2024-09-23 02:16:43,420 [wrapper] pilotpid: 241527
[2024-09-22 22:16:43] 2024-09-23 02:16:43,423 [wrapper] Pilot exit status: 0
[2024-09-22 22:16:43] 2024-09-23 02:16:43,434 [wrapper] pandaids: 6341679962
[2024-09-22 22:16:43] 2024-09-23 02:16:43,511 [wrapper] cleanup supervisor_pilot  42788 241528
[2024-09-22 22:16:43] 2024-09-23 02:16:43,514 [wrapper] Test setup, not cleaning
[2024-09-22 22:16:43] 2024-09-23 02:16:43,517 [wrapper] ==== wrapper stdout END ====
[2024-09-22 22:16:43] 2024-09-23 02:16:43,520 [wrapper] ==== wrapper stderr END ====
[2024-09-22 22:16:43] 2024-09-23 02:16:43,527 [wrapper] apfmon messages muted
[2024-09-22 22:16:43]  *** Error codes and diagnostics ***
[2024-09-22 22:16:43]     "exeErrorCode": 0,
[2024-09-22 22:16:43]     "exeErrorDiag": "",
[2024-09-22 22:16:43]     "pilotErrorCode": 0,
[2024-09-22 22:16:43]     "pilotErrorDiag": "",
[2024-09-22 22:16:43]  *** Listing of results directory ***
[2024-09-22 22:16:43] total 598224
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas    482533 Sep 22 19:39 pilot3.tar.gz
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas      5655 Sep 22 19:56 queuedata.json
[2024-09-22 22:16:43] -rwx------ 1 boincer umatlas     33679 Sep 22 19:57 runpilot2-wrapper.sh
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas       100 Sep 22 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-22 22:16:43] -rwxr-xr-x 1 boincer umatlas      7986 Sep 22 21:23 run_atlas
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas       105 Sep 22 21:23 job.xml
[2024-09-22 22:16:43] -rw-r--r-- 2 boincer umatlas     17539 Sep 22 21:23 start_atlas.sh
[2024-09-22 22:16:43] drwxrwx--x 2 boincer umatlas      4096 Sep 22 21:23 shared
[2024-09-22 22:16:43] -rw-r--r-- 2 boincer umatlas    495960 Sep 22 21:23 input.tar.gz
[2024-09-22 22:16:43] -rw-r--r-- 2 boincer umatlas 442200349 Sep 22 21:23 EVNT.41078629._000784.pool.root.1
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas         0 Sep 22 21:23 boinc_lockfile
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas      2556 Sep 22 21:23 pandaJob.out
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas       424 Sep 22 21:23 setup.sh.local
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas   1009807 Sep 22 21:23 agis_schedconf.cvmfs.json
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas   1618603 Sep 22 21:23 agis_ddmendpoints.agis.ALL.json
[2024-09-22 22:16:43] drwx------ 4 boincer umatlas      4096 Sep 22 21:23 pilot3
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas      6298 Sep 22 22:10 init_data.xml
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas        95 Sep 22 22:15 pilot_heartbeat.json
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas 165275940 Sep 22 22:15 HITS.41078631._021032.pool.root.1
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas      1059 Sep 22 22:16 memory_monitor_summary.json
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas      8192 Sep 22 22:16 boinc_mmap_file
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas        27 Sep 22 22:16 wrapper_checkpoint.txt
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas    298107 Sep 22 22:16 log.41078631._021032.job.log.tgz.1
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas       530 Sep 22 22:16 boinc_task_state.xml
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas      7754 Sep 22 22:16 heartbeat.json
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas      4402 Sep 22 22:16 pilotlog.txt
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas    325080 Sep 22 22:16 log.41078631._021032.job.log.1
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas       357 Sep 22 22:16 output.list
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas       620 Sep 22 22:16 runtime_log
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas    645120 Sep 22 22:16 result.tar.gz
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas     11010 Sep 22 22:16 runtime_log.err
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas       642 Sep 22 22:16 9sWKDm1clC6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmJLgKDmLQ0oEm.diag
[2024-09-22 22:16:43] -rw-r--r-- 1 boincer umatlas     21341 Sep 22 22:16 stderr.txt
[2024-09-22 22:16:43] HITS file was successfully produced:
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas 165275940 Sep 22 22:15 shared/HITS.pool.root.1
[2024-09-22 22:16:43]  *** Contents of shared directory: ***
[2024-09-22 22:16:43] total 594392
[2024-09-22 22:16:43] -rw-r--r-- 2 boincer umatlas     17539 Sep 22 21:23 start_atlas.sh
[2024-09-22 22:16:43] -rw-r--r-- 2 boincer umatlas    495960 Sep 22 21:23 input.tar.gz
[2024-09-22 22:16:43] -rw-r--r-- 2 boincer umatlas 442200349 Sep 22 21:23 ATLAS.root_0
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas 165275940 Sep 22 22:15 HITS.pool.root.1
[2024-09-22 22:16:43] -rw------- 1 boincer umatlas    645120 Sep 22 22:16 result.tar.gz
22:16:44 (237875): run_atlas exited; CPU time 18349.448085
22:16:44 (237875): called boinc_finish(0)

</stderr_txt>
]]>

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