Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:14:09 (172938): wrapper (7.7.26015): starting
21:14:09 (172938): wrapper: running run_atlas (--nthreads 8)
[2024-09-22 21:14:09] Arguments: --nthreads 8
[2024-09-22 21:14:09] Threads: 8
[2024-09-22 21:14:09] Checking for CVMFS
[2024-09-22 21:14:09] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-22 21:14:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-22 21:14:09] Running cvmfs_config stat atlas.cern.ch
[2024-09-22 21:14:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-22 21:14:10] 2.11.2.0 74629 83292 234312 137540 1 371 17257804 18432001 8082 130560 0 388973246 99.524 382408950 39551 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-09-22 21:14:10] CVMFS is ok
[2024-09-22 21:14:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-22 21:14:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-22 21:14:10] Further information can be found at the LHC@home message board.
[2024-09-22 21:14:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-22 21:14:10] Checking for apptainer binary...
[2024-09-22 21:14:10] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-22 21:14:10] Running /usr/bin/apptainer --version
[2024-09-22 21:14:10] apptainer version 1.3.2-1.el7
[2024-09-22 21:14:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-22 21:14:10] c-211-35-3.aglt2.org
[2024-09-22 21:14:10] apptainer works
[2024-09-22 21:14:10] Set ATHENA_PROC_NUMBER=8
[2024-09-22 21:14:10] Set ATHENA_CORE_NUMBER=8
[2024-09-22 21:14:10] Starting ATLAS job with PandaID=6341679317
[2024-09-22 21:14:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-22 22:10:40]  *** The last 200 lines of the pilot log: ***
[2024-09-22 22:10:40]  is_tar=False
[2024-09-22 22:10:40]  lfn=log.41078631._020775.job.log.tgz.1
[2024-09-22 22:10:40]  mtime=0
[2024-09-22 22:10:40]  protocol_id=None
[2024-09-22 22:10:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-22 22:10:40]  replicas=None
[2024-09-22 22:10:40]  scope=mc23_13p6TeV
[2024-09-22 22:10:40]  status=None
[2024-09-22 22:10:40]  status_code=0
[2024-09-22 22:10:40]  storage_token=
[2024-09-22 22:10:40]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6341679317/log.41078631._020775.job.log.tgz.1
[2024-09-22 22:10:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/77/log.41078631._020775.job.log.tgz.1
[2024-09-22 22:10:40]  workdir=None
[2024-09-22 22:10:40] ]
[2024-09-22 22:10:40] 2024-09-23 02:10:21,823 | INFO     | transferring file log.41078631._020775.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6341679317/log.41078631._020775.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-09-22 22:10:40] 2024-09-23 02:10:21,824 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6341679317/log.41078631._020775.job.log.tgz.1 /tmp/boinchome/slots/3/log.41078631._020775.job
[2024-09-22 22:10:40] 2024-09-23 02:10:21,847 | INFO     | adding to output.list: log.41078631._020775.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/77/log.41078631._020775.job.log.tg
[2024-09-22 22:10:40] 2024-09-23 02:10:21,848 | INFO     | summary of transferred files:
[2024-09-22 22:10:40] 2024-09-23 02:10:21,848 | INFO     |  -- lfn=log.41078631._020775.job.log.tgz.1, status_code=0, status=transferred
[2024-09-22 22:10:40] 2024-09-23 02:10:21,848 | INFO     | stage-out finished correctly
[2024-09-22 22:10:40] 2024-09-23 02:10:23,285 | INFO     | monitor loop #266: job 0:6341679317 is in state 'finished'
[2024-09-22 22:10:40] 2024-09-23 02:10:23,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 22:10:40] 2024-09-23 02:10:25,262 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-22 22:10:40] 2024-09-23 02:10:25,799 | INFO     | monitor loop #267: job 0:6341679317 is in state 'finished'
[2024-09-22 22:10:40] 2024-09-23 02:10:25,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 22:10:40] 2024-09-23 02:10:25,988 | INFO     | job 6341679317 has state=finished
[2024-09-22 22:10:40] 2024-09-23 02:10:25,988 | INFO     | preparing for final server update for job 6341679317 in state='finished'
[2024-09-22 22:10:40] 2024-09-23 02:10:25,989 | INFO     | this job has now completed (state=finished)
[2024-09-22 22:10:40] 2024-09-23 02:10:25,989 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-22 22:10:40] 2024-09-23 02:10:25,989 | INFO     | log transfer has been attempted: DONE
[2024-09-22 22:10:40] 2024-09-23 02:10:25,989 | INFO     | job 6341679317 has finished - writing final server update
[2024-09-22 22:10:40] 2024-09-23 02:10:25,989 | INFO     | total number of processed events: 400 (read)
[2024-09-22 22:10:40] 2024-09-23 02:10:25,993 | INFO     | executing command: lscpu
[2024-09-22 22:10:40] 2024-09-23 02:10:26,057 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-09-22 22:10:40] 2024-09-23 02:10:26,057 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-22 22:10:40] 2024-09-23 02:10:26,126 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-22 22:10:40] 2024-09-23 02:10:28,306 | INFO     | monitor loop #268: job 0:6341679317 is in state 'finished'
[2024-09-22 22:10:40] 2024-09-23 02:10:28,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 22:10:40] 2024-09-23 02:10:28,847 | INFO     | 3372s have passed since pilot start
[2024-09-22 22:10:40] 2024-09-23 02:10:28,881 | INFO     | CPU arch script returned: x86-64-v4
[2024-09-22 22:10:40] 2024-09-23 02:10:28,881 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6341679317/memory_monitor_summary.json (trf name=prmon)
[2024-09-22 22:10:40] 2024-09-23 02:10:28,882 | INFO     | extracted standard info from prmon json
[2024-09-22 22:10:40] 2024-09-23 02:10:28,882 | INFO     | extracted standard memory fields from prmon json
[2024-09-22 22:10:40] 2024-09-23 02:10:28,882 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-22 22:10:40] 2024-09-23 02:10:28,882 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-22 22:10:40] 2024-09-23 02:10:28,882 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-22 22:10:40] 2024-09-23 02:10:28,883 | INFO     | fitting pss+swap vs Time
[2024-09-22 22:10:40] 2024-09-23 02:10:28,883 | INFO     | model: linear, x: [1727054385.0, 1727054446.0, 1727054507.0, 1727054568.0, 1727054629.0, 1727054690.0, 1727054751.0, 1727054812.0, 1727054873.0, 1727054934.0, 1727
[2024-09-22 22:10:40] 2024-09-23 02:10:28,883 | INFO     | sum of square deviations: 34277852.0
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | sum of deviations: 13550219872.0
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | mean x: 1727055818.5
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | mean y: 2290559.875
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | -- intersect: -682712194346.9368
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | intersect: -682712194346.9368
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | chi2: 1.9596870578013197
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | -- intersect: -682712194346.9368
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | current memory leak: 395.31 B/s (using 48 data points, chi2=1.96)
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | ..............................
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | . Timing measurements:
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | . get job = 0 s
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | . initial setup = 2 s
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | . payload setup = 4 s
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | . stage-in = 0 s
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | . payload execution = 3340 s
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | . stage-out = 0 s
[2024-09-22 22:10:40] 2024-09-23 02:10:28,884 | INFO     | . log creation = 0 s
[2024-09-22 22:10:40] 2024-09-23 02:10:28,885 | INFO     | ..............................
[2024-09-22 22:10:40] 2024-09-23 02:10:28,932 | INFO     | 
[2024-09-22 22:10:40] 2024-09-23 02:10:28,932 | INFO     | job summary report
[2024-09-22 22:10:40] 2024-09-23 02:10:28,932 | INFO     | --------------------------------------------------
[2024-09-22 22:10:40] 2024-09-23 02:10:28,932 | INFO     | PanDA job id: 6341679317
[2024-09-22 22:10:40] 2024-09-23 02:10:28,932 | INFO     | task id: 41078631
[2024-09-22 22:10:40] 2024-09-23 02:10:28,932 | INFO     | errors: (none)
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | pilot state: finished 
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | transexitcode: 0
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | exeerrorcode: 0
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | exeerrordiag: 
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | exitcode: 0
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | exitmsg: OK
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | cpuconsumptiontime: 20094 s
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | nevents: 400
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | neventsw: 0
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | pid: 182932
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | pgrp: 182932
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | corecount: 8
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | event service: False
[2024-09-22 22:10:40] 2024-09-23 02:10:28,933 | INFO     | sizes: {0: 2439983, 1: 2440238, 4: 2440444, 11: 2440472, 3348: 2466036, 3349: 2474996, 3353: 2475180, 3356: 2475350}
[2024-09-22 22:10:40] 2024-09-23 02:10:28,934 | INFO     | --------------------------------------------------
[2024-09-22 22:10:40] 2024-09-23 02:10:28,934 | INFO     | 
[2024-09-22 22:10:40] 2024-09-23 02:10:28,934 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-09-22 22:10:40] 2024-09-23 02:10:28,953 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,953 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,955 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-22 22:10:40] 2024-09-23 02:10:28,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,955 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-22 22:10:40] 2024-09-23 02:10:28,955 | INFO     | job 6341679317 has completed (purged errors)
[2024-09-22 22:10:40] 2024-09-23 02:10:28,955 | INFO     | overall cleanup function is called
[2024-09-22 22:10:40] 2024-09-23 02:10:29,962 | INFO     | --- collectZombieJob: --- 10, [182932]
[2024-09-22 22:10:40] 2024-09-23 02:10:29,962 | INFO     | zombie collector waiting for pid 182932
[2024-09-22 22:10:40] 2024-09-23 02:10:29,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-22 22:10:40] 2024-09-23 02:10:29,963 | INFO     | collected zombie processes
[2024-09-22 22:10:40] 2024-09-23 02:10:29,963 | INFO     | will  attempt to kill all subprocesses of pid=182932
[2024-09-22 22:10:40] 2024-09-23 02:10:30,094 | INFO     | process IDs to be killed: [182932] (in reverse order)
[2024-09-22 22:10:40] 2024-09-23 02:10:30,169 | WARNING  | found no corresponding commands to process id(s)
[2024-09-22 22:10:40] 2024-09-23 02:10:30,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-22 22:10:40] 2024-09-23 02:10:30,178 | INFO     | did not find any defunct processes belonging to 182932
[2024-09-22 22:10:40] 2024-09-23 02:10:30,185 | INFO     | did not find any defunct processes belonging to 182932
[2024-09-22 22:10:40] 2024-09-23 02:10:30,185 | INFO     | ready for new job
[2024-09-22 22:10:40] 2024-09-23 02:10:30,185 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-22 22:10:40] 2024-09-23 02:10:30,186 | INFO     | **************************************
[2024-09-22 22:10:40] 2024-09-23 02:10:30,186 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-22 22:10:40] 2024-09-23 02:10:30,186 | INFO     | **************************************
[2024-09-22 22:10:40] 2024-09-23 02:10:30,186 | INFO     | 
[2024-09-22 22:10:40] 2024-09-23 02:10:30,191 | INFO     | architecture information:
[2024-09-22 22:10:40] 2024-09-23 02:10:30,191 | INFO     | executing command: cat /etc/os-release
[2024-09-22 22:10:40] 2024-09-23 02:10:30,214 | INFO     | cat /etc/os-release:
[2024-09-22 22:10:40] NAME="CentOS Linux"
[2024-09-22 22:10:40] VERSION="7 (Core)"
[2024-09-22 22:10:40] ID="centos"
[2024-09-22 22:10:40] ID_LIKE="rhel fedora"
[2024-09-22 22:10:40] VERSION_ID="7"
[2024-09-22 22:10:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-22 22:10:40] ANSI_COLOR="0;31"
[2024-09-22 22:10:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-22 22:10:40] HOME_URL="https://www.centos.org/"
[2024-09-22 22:10:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-22 22:10:40] 
[2024-09-22 22:10:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-22 22:10:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-22 22:10:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-22 22:10:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-22 22:10:40] 
[2024-09-22 22:10:40] 2024-09-23 02:10:30,214 | INFO     | **************************************
[2024-09-22 22:10:40] 2024-09-23 02:10:30,717 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-09-22 22:10:40] 2024-09-23 02:10:30,741 | INFO     | sufficient remaining disk space (100888739840 B)
[2024-09-22 22:10:40] 2024-09-23 02:10:30,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-22 22:10:40] 2024-09-23 02:10:30,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-22 22:10:40] 2024-09-23 02:10:30,741 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-22 22:10:40] 2024-09-23 02:10:30,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-22 22:10:40] 2024-09-23 02:10:30,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-22 22:10:40] 2024-09-23 02:10:30,742 | INFO     | found 0 job(s) in 20 queues
[2024-09-22 22:10:40] 2024-09-23 02:10:30,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-22 22:10:40] 2024-09-23 02:10:30,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-22 22:10:40] 2024-09-23 02:10:30,810 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-09-22 22:10:40] 2024-09-23 02:10:30,810 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-09-22 22:10:40] 2024-09-23 02:10:30,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-22 22:10:40] 2024-09-23 02:10:30,811 | INFO     | will abort loop
[2024-09-22 22:10:40] 2024-09-23 02:10:31,317 | INFO     | all job control threads have been joined
[2024-09-22 22:10:40] 2024-09-23 02:10:31,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-22 22:10:40] 2024-09-23 02:10:31,375 | INFO     | all payload control threads have been joined
[2024-09-22 22:10:40] 2024-09-23 02:10:31,633 | INFO     | all data control threads have been joined
[2024-09-22 22:10:40] 2024-09-23 02:10:31,747 | INFO     | [job] retrieve thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:31,748 | INFO     | [job] queue monitor thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:31,814 | INFO     | [job] job monitor thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:31,850 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:32,308 | INFO     | [payload] validate_pre thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:32,322 | INFO     | [job] control thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:32,380 | INFO     | [payload] control thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:32,446 | INFO     | [data] copytool_in thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:32,448 | INFO     | [payload] execute_payloads thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:32,602 | INFO     | [payload] failed_post thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:32,638 | INFO     | [data] control thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:32,730 | INFO     | [job] validate thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:32,753 | INFO     | [data] copytool_out thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:32,861 | INFO     | [job] create_data_payload thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:33,225 | INFO     | [payload] validate_post thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:35,360 | INFO     | [data] queue_monitor thread has finished
[2024-09-22 22:10:40] 2024-09-23 02:10:35,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140147507926848)>', '<ExcThread(monitor, started 140147215537920)>']
[2024-09-22 22:10:40] 2024-09-23 02:10:35,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-22 22:10:40] 2024-09-23 02:10:35,763 | INFO     | [monitor] control thread has ended
[2024-09-22 22:10:40] 2024-09-23 02:10:40,463 | INFO     | all workflow threads have been joined
[2024-09-22 22:10:40] 2024-09-23 02:10:40,463 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-22 22:10:40] 2024-09-23 02:10:40,463 | INFO     | traces error code: 0
[2024-09-22 22:10:40] 2024-09-23 02:10:40,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-22 22:10:40] 2024-09-23 02:10:40,580 [wrapper] ==== pilot stdout END ====
[2024-09-22 22:10:40] 2024-09-23 02:10:40,584 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-22 22:10:40] 2024-09-23 02:10:40,586 [wrapper] pilotpid: 176548
[2024-09-22 22:10:40] 2024-09-23 02:10:40,589 [wrapper] Pilot exit status: 0
[2024-09-22 22:10:40] 2024-09-23 02:10:40,599 [wrapper] pandaids: 6341679317
[2024-09-22 22:10:40] 2024-09-23 02:10:40,661 [wrapper] cleanup supervisor_pilot   6940 176549
[2024-09-22 22:10:40] 2024-09-23 02:10:40,665 [wrapper] Test setup, not cleaning
[2024-09-22 22:10:40] 2024-09-23 02:10:40,667 [wrapper] ==== wrapper stdout END ====
[2024-09-22 22:10:40] 2024-09-23 02:10:40,671 [wrapper] ==== wrapper stderr END ====
[2024-09-22 22:10:40] 2024-09-23 02:10:40,676 [wrapper] apfmon messages muted
[2024-09-22 22:10:40]  *** Error codes and diagnostics ***
[2024-09-22 22:10:40]     "exeErrorCode": 0,
[2024-09-22 22:10:40]     "exeErrorDiag": "",
[2024-09-22 22:10:40]     "pilotErrorCode": 0,
[2024-09-22 22:10:40]     "pilotErrorDiag": "",
[2024-09-22 22:10:40]  *** Listing of results directory ***
[2024-09-22 22:10:40] total 589660
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas    482533 Sep 22 19:39 pilot3.tar.gz
[2024-09-22 22:10:40] -rwx------ 1 boincer umatlas     33679 Sep 22 19:41 runpilot2-wrapper.sh
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas      5655 Sep 22 19:41 queuedata.json
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas       100 Sep 22 21:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-22 22:10:40] -rwxr-xr-x 1 boincer umatlas      7986 Sep 22 21:14 run_atlas
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas       105 Sep 22 21:14 job.xml
[2024-09-22 22:10:40] -rw-r--r-- 2 boincer umatlas 436482649 Sep 22 21:14 EVNT.41078629._000779.pool.root.1
[2024-09-22 22:10:40] -rw-r--r-- 2 boincer umatlas     17539 Sep 22 21:14 start_atlas.sh
[2024-09-22 22:10:40] drwxrwx--x 2 boincer umatlas      4096 Sep 22 21:14 shared
[2024-09-22 22:10:40] -rw-r--r-- 2 boincer umatlas    495955 Sep 22 21:14 input.tar.gz
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas         0 Sep 22 21:14 boinc_lockfile
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas      2556 Sep 22 21:14 pandaJob.out
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas       424 Sep 22 21:14 setup.sh.local
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas   1009749 Sep 22 21:14 agis_schedconf.cvmfs.json
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas   1618603 Sep 22 21:14 agis_ddmendpoints.agis.ALL.json
[2024-09-22 22:10:40] drwx------ 4 boincer umatlas      4096 Sep 22 21:14 pilot3
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas      6298 Sep 22 22:00 init_data.xml
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas       530 Sep 22 22:09 boinc_task_state.xml
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas 162203706 Sep 22 22:09 HITS.41078631._020775.pool.root.1
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas      1046 Sep 22 22:10 memory_monitor_summary.json
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas    292945 Sep 22 22:10 log.41078631._020775.job.log.tgz.1
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas      8192 Sep 22 22:10 boinc_mmap_file
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas        27 Sep 22 22:10 wrapper_checkpoint.txt
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas        95 Sep 22 22:10 pilot_heartbeat.json
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas      7759 Sep 22 22:10 heartbeat.json
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas      4525 Sep 22 22:10 pilotlog.txt
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas    340014 Sep 22 22:10 log.41078631._020775.job.log.1
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas       357 Sep 22 22:10 output.list
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas       620 Sep 22 22:10 runtime_log
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas    655360 Sep 22 22:10 result.tar.gz
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas       644 Sep 22 22:10 XjoKDm1NlC6n9Rq4apOajLDm4fhM0noT9bVorHsSDmv0VKDmYAczmn.diag
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas     11010 Sep 22 22:10 runtime_log.err
[2024-09-22 22:10:40] -rw-r--r-- 1 boincer umatlas     21559 Sep 22 22:10 stderr.txt
[2024-09-22 22:10:40] HITS file was successfully produced:
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas 162203706 Sep 22 22:09 shared/HITS.pool.root.1
[2024-09-22 22:10:40]  *** Contents of shared directory: ***
[2024-09-22 22:10:40] total 585816
[2024-09-22 22:10:40] -rw-r--r-- 2 boincer umatlas 436482649 Sep 22 21:14 ATLAS.root_0
[2024-09-22 22:10:40] -rw-r--r-- 2 boincer umatlas     17539 Sep 22 21:14 start_atlas.sh
[2024-09-22 22:10:40] -rw-r--r-- 2 boincer umatlas    495955 Sep 22 21:14 input.tar.gz
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas 162203706 Sep 22 22:09 HITS.pool.root.1
[2024-09-22 22:10:40] -rw------- 1 boincer umatlas    655360 Sep 22 22:10 result.tar.gz
22:10:42 (172938): run_atlas exited; CPU time 20046.816513
22:10:42 (172938): called boinc_finish(0)

</stderr_txt>
]]>

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