Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:43:57 (324101): wrapper (7.7.26015): starting
20:43:57 (324101): wrapper: running run_atlas (--nthreads 8)
[2024-09-22 20:43:57] Arguments: --nthreads 8
[2024-09-22 20:43:57] Threads: 8
[2024-09-22 20:43:57] Checking for CVMFS
[2024-09-22 20:43:57] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-22 20:43:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-22 20:43:57] Running cvmfs_config stat atlas.cern.ch
[2024-09-22 20:43:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-22 20:43:58] 2.11.2.0 218474 84357 189908 137540 3 212 16387951 18432001 7862 130560 0 426476864 99.411 504299032 40782 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-09-22 20:43:58] CVMFS is ok
[2024-09-22 20:43:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-22 20:43:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-22 20:43:58] Further information can be found at the LHC@home message board.
[2024-09-22 20:43:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-22 20:43:58] Checking for apptainer binary...
[2024-09-22 20:43:58] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-22 20:43:58] Running /usr/bin/apptainer --version
[2024-09-22 20:43:58] apptainer version 1.3.2-1.el7
[2024-09-22 20:43:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-22 20:43:58] c-211-33-3.aglt2.org
[2024-09-22 20:43:58] apptainer works
[2024-09-22 20:43:58] Set ATHENA_PROC_NUMBER=8
[2024-09-22 20:43:58] Set ATHENA_CORE_NUMBER=8
[2024-09-22 20:43:58] Starting ATLAS job with PandaID=6341678359
[2024-09-22 20:43:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-22 21:39:22]  *** The last 200 lines of the pilot log: ***
[2024-09-22 21:39:22]  direct_access_wan=False
[2024-09-22 21:39:22]  domain=
[2024-09-22 21:39:22]  filesize=291646
[2024-09-22 21:39:22]  filetype=log
[2024-09-22 21:39:22]  guid=915b0778-8518-4f2b-963f-9eb66939031f
[2024-09-22 21:39:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-22 21:39:22]  is_tar=False
[2024-09-22 21:39:22]  lfn=log.41078631._020322.job.log.tgz.1
[2024-09-22 21:39:22]  mtime=0
[2024-09-22 21:39:22]  protocol_id=None
[2024-09-22 21:39:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-22 21:39:22]  replicas=None
[2024-09-22 21:39:22]  scope=mc23_13p6TeV
[2024-09-22 21:39:22]  status=None
[2024-09-22 21:39:22]  status_code=0
[2024-09-22 21:39:22]  storage_token=
[2024-09-22 21:39:22]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6341678359/log.41078631._020322.job.log.tgz.1
[2024-09-22 21:39:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/cd/log.41078631._020322.job.log.tgz.1
[2024-09-22 21:39:22]  workdir=None
[2024-09-22 21:39:22] ]
[2024-09-22 21:39:22] 2024-09-23 01:39:02,783 | INFO     | transferring file log.41078631._020322.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6341678359/log.41078631._020322.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-09-22 21:39:22] 2024-09-23 01:39:02,783 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6341678359/log.41078631._020322.job.log.tgz.1 /tmp/boinchome/slots/3/log.41078631._020322.job
[2024-09-22 21:39:22] 2024-09-23 01:39:02,812 | INFO     | adding to output.list: log.41078631._020322.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/cd/log.41078631._020322.job.log.tg
[2024-09-22 21:39:22] 2024-09-23 01:39:02,812 | INFO     | summary of transferred files:
[2024-09-22 21:39:22] 2024-09-23 01:39:02,812 | INFO     |  -- lfn=log.41078631._020322.job.log.tgz.1, status_code=0, status=transferred
[2024-09-22 21:39:22] 2024-09-23 01:39:02,812 | INFO     | stage-out finished correctly
[2024-09-22 21:39:22] 2024-09-23 01:39:05,669 | WARNING  | process 7602 is no longer using CPU - aborting
[2024-09-22 21:39:22] 2024-09-23 01:39:05,921 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-22 21:39:22] 2024-09-23 01:39:06,615 | INFO     | job 6341678359 has state=finished
[2024-09-22 21:39:22] 2024-09-23 01:39:06,615 | INFO     | preparing for final server update for job 6341678359 in state='finished'
[2024-09-22 21:39:22] 2024-09-23 01:39:06,616 | INFO     | this job has now completed (state=finished)
[2024-09-22 21:39:22] 2024-09-23 01:39:06,616 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-22 21:39:22] 2024-09-23 01:39:06,616 | INFO     | log transfer has been attempted: DONE
[2024-09-22 21:39:22] 2024-09-23 01:39:06,616 | INFO     | job 6341678359 has finished - writing final server update
[2024-09-22 21:39:22] 2024-09-23 01:39:06,617 | INFO     | total number of processed events: 400 (read)
[2024-09-22 21:39:22] 2024-09-23 01:39:06,623 | INFO     | executing command: lscpu
[2024-09-22 21:39:22] 2024-09-23 01:39:06,699 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-09-22 21:39:22] 2024-09-23 01:39:06,699 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-22 21:39:22] 2024-09-23 01:39:06,774 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-22 21:39:22] 2024-09-23 01:39:08,172 | INFO     | monitor loop #262: job 0:6341678359 is in state 'finished'
[2024-09-22 21:39:22] 2024-09-23 01:39:08,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 21:39:22] 2024-09-23 01:39:09,829 | INFO     | CPU arch script returned: x86-64-v4
[2024-09-22 21:39:22] 2024-09-23 01:39:09,830 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6341678359/memory_monitor_summary.json (trf name=prmon)
[2024-09-22 21:39:22] 2024-09-23 01:39:09,831 | INFO     | extracted standard info from prmon json
[2024-09-22 21:39:22] 2024-09-23 01:39:09,831 | INFO     | extracted standard memory fields from prmon json
[2024-09-22 21:39:22] 2024-09-23 01:39:09,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-22 21:39:22] 2024-09-23 01:39:09,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-22 21:39:22] 2024-09-23 01:39:09,832 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-22 21:39:22] 2024-09-23 01:39:09,834 | INFO     | fitting pss+swap vs Time
[2024-09-22 21:39:22] 2024-09-23 01:39:09,834 | INFO     | model: linear, x: [1727052575.0, 1727052636.0, 1727052697.0, 1727052758.0, 1727052819.0, 1727052880.0, 1727052941.0, 1727053002.0, 1727053063.0, 1727053124.0, 1727
[2024-09-22 21:39:22] 2024-09-23 01:39:09,835 | INFO     | sum of square deviations: 32179208.0
[2024-09-22 21:39:22] 2024-09-23 01:39:09,835 | INFO     | sum of deviations: 12793018271.0
[2024-09-22 21:39:22] 2024-09-23 01:39:09,835 | INFO     | mean x: 1727053978.0
[2024-09-22 21:39:22] 2024-09-23 01:39:09,835 | INFO     | mean y: 2293182.9574468085
[2024-09-22 21:39:22] 2024-09-23 01:39:09,835 | INFO     | -- intersect: -686597361337.9752
[2024-09-22 21:39:22] 2024-09-23 01:39:09,835 | INFO     | intersect: -686597361337.9752
[2024-09-22 21:39:22] 2024-09-23 01:39:09,836 | INFO     | chi2: 1.8451518352080092
[2024-09-22 21:39:22] 2024-09-23 01:39:09,836 | INFO     | -- intersect: -686597361337.9752
[2024-09-22 21:39:22] 2024-09-23 01:39:09,836 | INFO     | current memory leak: 397.56 B/s (using 47 data points, chi2=1.85)
[2024-09-22 21:39:22] 2024-09-23 01:39:09,836 | INFO     | ..............................
[2024-09-22 21:39:22] 2024-09-23 01:39:09,837 | INFO     | . Timing measurements:
[2024-09-22 21:39:22] 2024-09-23 01:39:09,837 | INFO     | . get job = 0 s
[2024-09-22 21:39:22] 2024-09-23 01:39:09,837 | INFO     | . initial setup = 2 s
[2024-09-22 21:39:22] 2024-09-23 01:39:09,837 | INFO     | . payload setup = 4 s
[2024-09-22 21:39:22] 2024-09-23 01:39:09,837 | INFO     | . stage-in = 0 s
[2024-09-22 21:39:22] 2024-09-23 01:39:09,837 | INFO     | . payload execution = 3270 s
[2024-09-22 21:39:22] 2024-09-23 01:39:09,837 | INFO     | . stage-out = 0 s
[2024-09-22 21:39:22] 2024-09-23 01:39:09,837 | INFO     | . log creation = 0 s
[2024-09-22 21:39:22] 2024-09-23 01:39:09,837 | INFO     | ..............................
[2024-09-22 21:39:22] 2024-09-23 01:39:10,368 | INFO     | 
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | job summary report
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | --------------------------------------------------
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | PanDA job id: 6341678359
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | task id: 41078631
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | errors: (none)
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | pilot state: finished 
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | transexitcode: 0
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | exeerrorcode: 0
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | exeerrordiag: 
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | exitcode: 0
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | exitmsg: OK
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | cpuconsumptiontime: 19587 s
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | nevents: 400
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | neventsw: 0
[2024-09-22 21:39:22] 2024-09-23 01:39:10,369 | INFO     | pid: 7602
[2024-09-22 21:39:22] 2024-09-23 01:39:10,370 | INFO     | pgrp: 7602
[2024-09-22 21:39:22] 2024-09-23 01:39:10,370 | INFO     | corecount: 8
[2024-09-22 21:39:22] 2024-09-23 01:39:10,370 | INFO     | event service: False
[2024-09-22 21:39:22] 2024-09-23 01:39:10,370 | INFO     | sizes: {0: 2440205, 1: 2440205, 4: 2440439, 11: 2440467, 3278: 2465999, 3280: 2474959, 3283: 2475143, 3287: 2475313}
[2024-09-22 21:39:22] 2024-09-23 01:39:10,370 | INFO     | --------------------------------------------------
[2024-09-22 21:39:22] 2024-09-23 01:39:10,370 | INFO     | 
[2024-09-22 21:39:22] 2024-09-23 01:39:10,370 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-09-22 21:39:22] 2024-09-23 01:39:10,403 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,403 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,403 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,403 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | job 6341678359 has completed (purged errors)
[2024-09-22 21:39:22] 2024-09-23 01:39:10,404 | INFO     | overall cleanup function is called
[2024-09-22 21:39:22] 2024-09-23 01:39:11,412 | INFO     | --- collectZombieJob: --- 10, [7602]
[2024-09-22 21:39:22] 2024-09-23 01:39:11,412 | INFO     | zombie collector waiting for pid 7602
[2024-09-22 21:39:22] 2024-09-23 01:39:11,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-22 21:39:22] 2024-09-23 01:39:11,412 | INFO     | collected zombie processes
[2024-09-22 21:39:22] 2024-09-23 01:39:11,412 | INFO     | will  attempt to kill all subprocesses of pid=7602
[2024-09-22 21:39:22] 2024-09-23 01:39:11,552 | INFO     | process IDs to be killed: [7602] (in reverse order)
[2024-09-22 21:39:22] 2024-09-23 01:39:11,661 | WARNING  | found no corresponding commands to process id(s)
[2024-09-22 21:39:22] 2024-09-23 01:39:11,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-22 21:39:22] 2024-09-23 01:39:11,669 | INFO     | did not find any defunct processes belonging to 7602
[2024-09-22 21:39:22] 2024-09-23 01:39:11,675 | INFO     | did not find any defunct processes belonging to 7602
[2024-09-22 21:39:22] 2024-09-23 01:39:11,675 | INFO     | ready for new job
[2024-09-22 21:39:22] 2024-09-23 01:39:11,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-22 21:39:22] 2024-09-23 01:39:11,676 | INFO     | **************************************
[2024-09-22 21:39:22] 2024-09-23 01:39:11,677 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-22 21:39:22] 2024-09-23 01:39:11,677 | INFO     | **************************************
[2024-09-22 21:39:22] 2024-09-23 01:39:11,677 | INFO     | 
[2024-09-22 21:39:22] 2024-09-23 01:39:11,680 | INFO     | architecture information:
[2024-09-22 21:39:22] 2024-09-23 01:39:11,680 | INFO     | executing command: cat /etc/os-release
[2024-09-22 21:39:22] 2024-09-23 01:39:11,707 | INFO     | cat /etc/os-release:
[2024-09-22 21:39:22] NAME="CentOS Linux"
[2024-09-22 21:39:22] VERSION="7 (Core)"
[2024-09-22 21:39:22] ID="centos"
[2024-09-22 21:39:22] ID_LIKE="rhel fedora"
[2024-09-22 21:39:22] VERSION_ID="7"
[2024-09-22 21:39:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-22 21:39:22] ANSI_COLOR="0;31"
[2024-09-22 21:39:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-22 21:39:22] HOME_URL="https://www.centos.org/"
[2024-09-22 21:39:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-22 21:39:22] 
[2024-09-22 21:39:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-22 21:39:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-22 21:39:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-22 21:39:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-22 21:39:22] 
[2024-09-22 21:39:22] 2024-09-23 01:39:11,707 | INFO     | **************************************
[2024-09-22 21:39:22] 2024-09-23 01:39:12,210 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-09-22 21:39:22] 2024-09-23 01:39:12,234 | INFO     | sufficient remaining disk space (101933121536 B)
[2024-09-22 21:39:22] 2024-09-23 01:39:12,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-22 21:39:22] 2024-09-23 01:39:12,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-22 21:39:22] 2024-09-23 01:39:12,234 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-22 21:39:22] 2024-09-23 01:39:12,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-22 21:39:22] 2024-09-23 01:39:12,235 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-22 21:39:22] 2024-09-23 01:39:12,235 | INFO     | aborting loop
[2024-09-22 21:39:22] 2024-09-23 01:39:12,236 | INFO     | found 0 job(s) in 20 queues
[2024-09-22 21:39:22] 2024-09-23 01:39:12,237 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-22 21:39:22] 2024-09-23 01:39:12,237 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-22 21:39:22] 2024-09-23 01:39:12,388 | INFO     | all data control threads have been joined
[2024-09-22 21:39:22] 2024-09-23 01:39:12,807 | INFO     | all job control threads have been joined
[2024-09-22 21:39:22] 2024-09-23 01:39:13,240 | INFO     | [job] retrieve thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:13,242 | INFO     | [job] job monitor thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:13,243 | INFO     | all payload control threads have been joined
[2024-09-22 21:39:22] 2024-09-23 01:39:13,260 | INFO     | [payload] validate_pre thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:13,303 | INFO     | [job] create_data_payload thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:13,390 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-22 21:39:22] 2024-09-23 01:39:13,394 | INFO     | [data] control thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:13,710 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:13,768 | INFO     | [payload] failed_post thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:13,813 | INFO     | [job] control thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:13,862 | INFO     | [data] copytool_in thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:13,885 | INFO     | [payload] execute_payloads thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:14,249 | INFO     | [payload] control thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:14,513 | INFO     | [job] validate thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:14,777 | INFO     | [payload] validate_post thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:14,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-22 21:39:22] 2024-09-23 01:39:15,396 | INFO     | [data] copytool_out thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:15,939 | INFO     | [job] queue monitor thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:16,241 | INFO     | [data] queue_monitor thread has finished
[2024-09-22 21:39:22] 2024-09-23 01:39:17,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339546527552)>', '<ExcThread(monitor, started 140339104958208)>']
[2024-09-22 21:39:22] 2024-09-23 01:39:17,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-22 21:39:22] 2024-09-23 01:39:17,263 | INFO     | [monitor] control thread has ended
[2024-09-22 21:39:22] 2024-09-23 01:39:22,152 | INFO     | all workflow threads have been joined
[2024-09-22 21:39:22] 2024-09-23 01:39:22,153 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-22 21:39:22] 2024-09-23 01:39:22,153 | INFO     | traces error code: 0
[2024-09-22 21:39:22] 2024-09-23 01:39:22,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-22 21:39:22] 2024-09-23 01:39:22,268 [wrapper] ==== pilot stdout END ====
[2024-09-22 21:39:22] 2024-09-23 01:39:22,272 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-22 21:39:22] 2024-09-23 01:39:22,275 [wrapper] pilotpid: 820
[2024-09-22 21:39:22] 2024-09-23 01:39:22,277 [wrapper] Pilot exit status: 0
[2024-09-22 21:39:22] 2024-09-23 01:39:22,287 [wrapper] pandaids: 6341678359
[2024-09-22 21:39:22] 2024-09-23 01:39:22,352 [wrapper] cleanup supervisor_pilot 165127 821
[2024-09-22 21:39:22] 2024-09-23 01:39:22,356 [wrapper] Test setup, not cleaning
[2024-09-22 21:39:22] 2024-09-23 01:39:22,359 [wrapper] ==== wrapper stdout END ====
[2024-09-22 21:39:22] 2024-09-23 01:39:22,362 [wrapper] ==== wrapper stderr END ====
[2024-09-22 21:39:22] 2024-09-23 01:39:22,368 [wrapper] apfmon messages muted
[2024-09-22 21:39:22]  *** Error codes and diagnostics ***
[2024-09-22 21:39:22]     "exeErrorCode": 0,
[2024-09-22 21:39:22]     "exeErrorDiag": "",
[2024-09-22 21:39:22]     "pilotErrorCode": 0,
[2024-09-22 21:39:22]     "pilotErrorDiag": "",
[2024-09-22 21:39:22]  *** Listing of results directory ***
[2024-09-22 21:39:22] total 593452
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas    482533 Sep 22 19:09 pilot3.tar.gz
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas      5655 Sep 22 19:12 queuedata.json
[2024-09-22 21:39:22] -rwx------ 1 boincer umatlas     33679 Sep 22 19:12 runpilot2-wrapper.sh
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas       100 Sep 22 20:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-22 21:39:22] -rwxr-xr-x 1 boincer umatlas      7986 Sep 22 20:43 run_atlas
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas       105 Sep 22 20:43 job.xml
[2024-09-22 21:39:22] -rw-r--r-- 2 boincer umatlas 439313441 Sep 22 20:43 EVNT.41078629._000283.pool.root.1
[2024-09-22 21:39:22] -rw-r--r-- 2 boincer umatlas     17539 Sep 22 20:43 start_atlas.sh
[2024-09-22 21:39:22] drwxrwx--x 2 boincer umatlas      4096 Sep 22 20:43 shared
[2024-09-22 21:39:22] -rw-r--r-- 2 boincer umatlas    495958 Sep 22 20:43 input.tar.gz
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas         0 Sep 22 20:43 boinc_lockfile
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas      2553 Sep 22 20:43 pandaJob.out
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas       424 Sep 22 20:43 setup.sh.local
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas   1009749 Sep 22 20:44 agis_schedconf.cvmfs.json
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas   1618603 Sep 22 20:44 agis_ddmendpoints.agis.ALL.json
[2024-09-22 21:39:22] drwx------ 4 boincer umatlas      4096 Sep 22 20:44 pilot3
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas      6300 Sep 22 21:38 init_data.xml
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas        95 Sep 22 21:38 pilot_heartbeat.json
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas 163277326 Sep 22 21:38 HITS.41078631._020322.pool.root.1
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas       530 Sep 22 21:38 boinc_task_state.xml
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas      1049 Sep 22 21:38 memory_monitor_summary.json
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas    291646 Sep 22 21:39 log.41078631._020322.job.log.tgz.1
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas      7757 Sep 22 21:39 heartbeat.json
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas      8192 Sep 22 21:39 boinc_mmap_file
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas        27 Sep 22 21:39 wrapper_checkpoint.txt
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas      4339 Sep 22 21:39 pilotlog.txt
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas    330643 Sep 22 21:39 log.41078631._020322.job.log.1
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas       357 Sep 22 21:39 output.list
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas       620 Sep 22 21:39 runtime_log
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas    645120 Sep 22 21:39 result.tar.gz
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas     11010 Sep 22 21:39 runtime_log.err
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas       643 Sep 22 21:39 0loLDm3vkC6n9Rq4apOajLDm4fhM0noT9bVorHsSDmyxVKDmtBrAVm.diag
[2024-09-22 21:39:22] -rw-r--r-- 1 boincer umatlas     21106 Sep 22 21:39 stderr.txt
[2024-09-22 21:39:22] HITS file was successfully produced:
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas 163277326 Sep 22 21:38 shared/HITS.pool.root.1
[2024-09-22 21:39:22]  *** Contents of shared directory: ***
[2024-09-22 21:39:22] total 589620
[2024-09-22 21:39:22] -rw-r--r-- 2 boincer umatlas 439313441 Sep 22 20:43 ATLAS.root_0
[2024-09-22 21:39:22] -rw-r--r-- 2 boincer umatlas     17539 Sep 22 20:43 start_atlas.sh
[2024-09-22 21:39:22] -rw-r--r-- 2 boincer umatlas    495958 Sep 22 20:43 input.tar.gz
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas 163277326 Sep 22 21:38 HITS.pool.root.1
[2024-09-22 21:39:22] -rw------- 1 boincer umatlas    645120 Sep 22 21:39 result.tar.gz
21:39:23 (324101): run_atlas exited; CPU time 19546.086020
21:39:23 (324101): called boinc_finish(0)

</stderr_txt>
]]>

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