Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:17:38 (294932): wrapper (7.7.26015): starting
19:17:38 (294932): wrapper: running run_atlas (--nthreads 8)
[2024-09-22 19:17:38] Arguments: --nthreads 8
[2024-09-22 19:17:38] Threads: 8
[2024-09-22 19:17:38] Checking for CVMFS
[2024-09-22 19:17:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-22 19:17:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-22 19:17:38] Running cvmfs_config stat atlas.cern.ch
[2024-09-22 19:17:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-22 19:17:39] 2.11.2.0 74629 83175 229104 137539 1 59 16927504 18432001 8246 130560 0 387696782 99.523 382374071 39551 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-09-22 19:17:39] CVMFS is ok
[2024-09-22 19:17:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-22 19:17:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-22 19:17:39] Further information can be found at the LHC@home message board.
[2024-09-22 19:17:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-22 19:17:39] Checking for apptainer binary...
[2024-09-22 19:17:39] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-22 19:17:39] Running /usr/bin/apptainer --version
[2024-09-22 19:17:39] apptainer version 1.3.2-1.el7
[2024-09-22 19:17:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-22 19:17:39] c-211-35-3.aglt2.org
[2024-09-22 19:17:39] apptainer works
[2024-09-22 19:17:39] Set ATHENA_PROC_NUMBER=8
[2024-09-22 19:17:39] Set ATHENA_CORE_NUMBER=8
[2024-09-22 19:17:40] Starting ATLAS job with PandaID=6342669186
[2024-09-22 19:17:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-22 20:14:16]  *** The last 200 lines of the pilot log: ***
[2024-09-22 20:14:16]  filetype=log
[2024-09-22 20:14:16]  guid=74c8180d-b937-45d8-9395-9af5a9020865
[2024-09-22 20:14:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-22 20:14:16]  is_tar=False
[2024-09-22 20:14:16]  lfn=log.41078614._025790.job.log.tgz.1
[2024-09-22 20:14:16]  mtime=0
[2024-09-22 20:14:16]  protocol_id=None
[2024-09-22 20:14:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-22 20:14:16]  replicas=None
[2024-09-22 20:14:16]  scope=mc23_13p6TeV
[2024-09-22 20:14:16]  status=None
[2024-09-22 20:14:16]  status_code=0
[2024-09-22 20:14:16]  storage_token=
[2024-09-22 20:14:16]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6342669186/log.41078614._025790.job.log.tgz.1
[2024-09-22 20:14:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/ed/log.41078614._025790.job.log.tgz.1
[2024-09-22 20:14:16]  workdir=None
[2024-09-22 20:14:16] ]
[2024-09-22 20:14:16] 2024-09-23 00:13:55,859 | INFO     | transferring file log.41078614._025790.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6342669186/log.41078614._025790.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-09-22 20:14:16] 2024-09-23 00:13:55,859 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6342669186/log.41078614._025790.job.log.tgz.1 /tmp/boinchome/slots/2/log.41078614._025790.job
[2024-09-22 20:14:16] 2024-09-23 00:13:55,877 | INFO     | adding to output.list: log.41078614._025790.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/ed/log.41078614._025790.job.log.tg
[2024-09-22 20:14:16] 2024-09-23 00:13:55,877 | INFO     | summary of transferred files:
[2024-09-22 20:14:16] 2024-09-23 00:13:55,877 | INFO     |  -- lfn=log.41078614._025790.job.log.tgz.1, status_code=0, status=transferred
[2024-09-22 20:14:16] 2024-09-23 00:13:55,877 | INFO     | stage-out finished correctly
[2024-09-22 20:14:16] 2024-09-23 00:13:55,918 | INFO     | monitor loop #268: job 0:6342669186 is in state 'finished'
[2024-09-22 20:14:16] 2024-09-23 00:13:55,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 20:14:16] 2024-09-23 00:13:57,565 | INFO     | 3371s have passed since pilot start
[2024-09-22 20:14:16] 2024-09-23 00:13:58,432 | INFO     | monitor loop #269: job 0:6342669186 is in state 'finished'
[2024-09-22 20:14:16] 2024-09-23 00:13:58,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 20:14:16] 2024-09-23 00:13:58,974 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-22 20:14:16] 2024-09-23 00:13:59,071 | INFO     | job 6342669186 has state=finished
[2024-09-22 20:14:16] 2024-09-23 00:13:59,071 | INFO     | preparing for final server update for job 6342669186 in state='finished'
[2024-09-22 20:14:16] 2024-09-23 00:13:59,072 | INFO     | this job has now completed (state=finished)
[2024-09-22 20:14:16] 2024-09-23 00:13:59,072 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-22 20:14:16] 2024-09-23 00:13:59,072 | INFO     | log transfer has been attempted: DONE
[2024-09-22 20:14:16] 2024-09-23 00:13:59,072 | INFO     | job 6342669186 has finished - writing final server update
[2024-09-22 20:14:16] 2024-09-23 00:13:59,072 | INFO     | total number of processed events: 400 (read)
[2024-09-22 20:14:16] 2024-09-23 00:13:59,080 | INFO     | executing command: lscpu
[2024-09-22 20:14:16] 2024-09-23 00:13:59,150 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-09-22 20:14:16] 2024-09-23 00:13:59,150 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-22 20:14:16] 2024-09-23 00:13:59,232 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-22 20:14:16] 2024-09-23 00:14:00,936 | INFO     | monitor loop #270: job 0:6342669186 is in state 'finished'
[2024-09-22 20:14:16] 2024-09-23 00:14:00,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 20:14:16] 2024-09-23 00:14:02,108 | INFO     | CPU arch script returned: x86-64-v4
[2024-09-22 20:14:16] 2024-09-23 00:14:02,109 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6342669186/memory_monitor_summary.json (trf name=prmon)
[2024-09-22 20:14:16] 2024-09-23 00:14:02,110 | INFO     | extracted standard info from prmon json
[2024-09-22 20:14:16] 2024-09-23 00:14:02,110 | INFO     | extracted standard memory fields from prmon json
[2024-09-22 20:14:16] 2024-09-23 00:14:02,111 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-22 20:14:16] 2024-09-23 00:14:02,111 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-22 20:14:16] 2024-09-23 00:14:02,111 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-22 20:14:16] 2024-09-23 00:14:02,113 | INFO     | fitting pss+swap vs Time
[2024-09-22 20:14:16] 2024-09-23 00:14:02,114 | INFO     | model: linear, x: [1727047395.0, 1727047456.0, 1727047517.0, 1727047578.0, 1727047639.0, 1727047700.0, 1727047761.0, 1727047822.0, 1727047883.0, 1727047944.0, 1727
[2024-09-22 20:14:16] 2024-09-23 00:14:02,114 | INFO     | sum of square deviations: 34277852.0
[2024-09-22 20:14:16] 2024-09-23 00:14:02,114 | INFO     | sum of deviations: 13097223136.0
[2024-09-22 20:14:16] 2024-09-23 00:14:02,115 | INFO     | mean x: 1727048828.5
[2024-09-22 20:14:16] 2024-09-23 00:14:02,115 | INFO     | mean y: 2350940.625
[2024-09-22 20:14:16] 2024-09-23 00:14:02,115 | INFO     | -- intersect: -659885668694.6747
[2024-09-22 20:14:16] 2024-09-23 00:14:02,115 | INFO     | intersect: -659885668694.6747
[2024-09-22 20:14:16] 2024-09-23 00:14:02,115 | INFO     | chi2: 1.8006941540294819
[2024-09-22 20:14:16] 2024-09-23 00:14:02,115 | INFO     | -- intersect: -659885668694.6747
[2024-09-22 20:14:16] 2024-09-23 00:14:02,116 | INFO     | current memory leak: 382.09 B/s (using 48 data points, chi2=1.80)
[2024-09-22 20:14:16] 2024-09-23 00:14:02,116 | INFO     | ..............................
[2024-09-22 20:14:16] 2024-09-23 00:14:02,116 | INFO     | . Timing measurements:
[2024-09-22 20:14:16] 2024-09-23 00:14:02,116 | INFO     | . get job = 0 s
[2024-09-22 20:14:16] 2024-09-23 00:14:02,116 | INFO     | . initial setup = 2 s
[2024-09-22 20:14:16] 2024-09-23 00:14:02,117 | INFO     | . payload setup = 4 s
[2024-09-22 20:14:16] 2024-09-23 00:14:02,117 | INFO     | . stage-in = 0 s
[2024-09-22 20:14:16] 2024-09-23 00:14:02,117 | INFO     | . payload execution = 3343 s
[2024-09-22 20:14:16] 2024-09-23 00:14:02,117 | INFO     | . stage-out = 0 s
[2024-09-22 20:14:16] 2024-09-23 00:14:02,117 | INFO     | . log creation = 0 s
[2024-09-22 20:14:16] 2024-09-23 00:14:02,117 | INFO     | ..............................
[2024-09-22 20:14:16] 2024-09-23 00:14:02,213 | INFO     | 
[2024-09-22 20:14:16] 2024-09-23 00:14:02,213 | INFO     | job summary report
[2024-09-22 20:14:16] 2024-09-23 00:14:02,213 | INFO     | --------------------------------------------------
[2024-09-22 20:14:16] 2024-09-23 00:14:02,213 | INFO     | PanDA job id: 6342669186
[2024-09-22 20:14:16] 2024-09-23 00:14:02,214 | INFO     | task id: 41078614
[2024-09-22 20:14:16] 2024-09-23 00:14:02,214 | INFO     | errors: (none)
[2024-09-22 20:14:16] 2024-09-23 00:14:02,214 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-22 20:14:16] 2024-09-23 00:14:02,214 | INFO     | pilot state: finished 
[2024-09-22 20:14:16] 2024-09-23 00:14:02,214 | INFO     | transexitcode: 0
[2024-09-22 20:14:16] 2024-09-23 00:14:02,214 | INFO     | exeerrorcode: 0
[2024-09-22 20:14:16] 2024-09-23 00:14:02,214 | INFO     | exeerrordiag: 
[2024-09-22 20:14:16] 2024-09-23 00:14:02,214 | INFO     | exitcode: 0
[2024-09-22 20:14:16] 2024-09-23 00:14:02,214 | INFO     | exitmsg: OK
[2024-09-22 20:14:16] 2024-09-23 00:14:02,215 | INFO     | cpuconsumptiontime: 20502 s
[2024-09-22 20:14:16] 2024-09-23 00:14:02,215 | INFO     | nevents: 400
[2024-09-22 20:14:16] 2024-09-23 00:14:02,215 | INFO     | neventsw: 0
[2024-09-22 20:14:16] 2024-09-23 00:14:02,215 | INFO     | pid: 305553
[2024-09-22 20:14:16] 2024-09-23 00:14:02,215 | INFO     | pgrp: 305553
[2024-09-22 20:14:16] 2024-09-23 00:14:02,215 | INFO     | corecount: 8
[2024-09-22 20:14:16] 2024-09-23 00:14:02,215 | INFO     | event service: False
[2024-09-22 20:14:16] 2024-09-23 00:14:02,215 | INFO     | sizes: {0: 2440204, 3: 2440410, 11: 2440438, 3351: 2465981, 3352: 2465980, 3353: 2474996, 3356: 2475180, 3360: 2475350}
[2024-09-22 20:14:16] 2024-09-23 00:14:02,215 | INFO     | --------------------------------------------------
[2024-09-22 20:14:16] 2024-09-23 00:14:02,216 | INFO     | 
[2024-09-22 20:14:16] 2024-09-23 00:14:02,216 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-09-22 20:14:16] 2024-09-23 00:14:02,247 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,248 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,248 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,248 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,249 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-22 20:14:16] 2024-09-23 00:14:02,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,250 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-22 20:14:16] 2024-09-23 00:14:02,250 | INFO     | job 6342669186 has completed (purged errors)
[2024-09-22 20:14:16] 2024-09-23 00:14:02,250 | INFO     | overall cleanup function is called
[2024-09-22 20:14:16] 2024-09-23 00:14:03,257 | INFO     | --- collectZombieJob: --- 10, [305553]
[2024-09-22 20:14:16] 2024-09-23 00:14:03,258 | INFO     | zombie collector waiting for pid 305553
[2024-09-22 20:14:16] 2024-09-23 00:14:03,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-22 20:14:16] 2024-09-23 00:14:03,258 | INFO     | collected zombie processes
[2024-09-22 20:14:16] 2024-09-23 00:14:03,258 | INFO     | will  attempt to kill all subprocesses of pid=305553
[2024-09-22 20:14:16] 2024-09-23 00:14:03,417 | INFO     | process IDs to be killed: [305553] (in reverse order)
[2024-09-22 20:14:16] 2024-09-23 00:14:03,527 | WARNING  | found no corresponding commands to process id(s)
[2024-09-22 20:14:16] 2024-09-23 00:14:03,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-22 20:14:16] 2024-09-23 00:14:03,539 | INFO     | did not find any defunct processes belonging to 305553
[2024-09-22 20:14:16] 2024-09-23 00:14:03,549 | INFO     | did not find any defunct processes belonging to 305553
[2024-09-22 20:14:16] 2024-09-23 00:14:03,550 | INFO     | ready for new job
[2024-09-22 20:14:16] 2024-09-23 00:14:03,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-22 20:14:16] 2024-09-23 00:14:03,551 | INFO     | **************************************
[2024-09-22 20:14:16] 2024-09-23 00:14:03,552 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-22 20:14:16] 2024-09-23 00:14:03,552 | INFO     | **************************************
[2024-09-22 20:14:16] 2024-09-23 00:14:03,552 | INFO     | 
[2024-09-22 20:14:16] 2024-09-23 00:14:03,558 | INFO     | architecture information:
[2024-09-22 20:14:16] 2024-09-23 00:14:03,558 | INFO     | executing command: cat /etc/os-release
[2024-09-22 20:14:16] 2024-09-23 00:14:03,581 | INFO     | cat /etc/os-release:
[2024-09-22 20:14:16] NAME="CentOS Linux"
[2024-09-22 20:14:16] VERSION="7 (Core)"
[2024-09-22 20:14:16] ID="centos"
[2024-09-22 20:14:16] ID_LIKE="rhel fedora"
[2024-09-22 20:14:16] VERSION_ID="7"
[2024-09-22 20:14:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-22 20:14:16] ANSI_COLOR="0;31"
[2024-09-22 20:14:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-22 20:14:16] HOME_URL="https://www.centos.org/"
[2024-09-22 20:14:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-22 20:14:16] 
[2024-09-22 20:14:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-22 20:14:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-22 20:14:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-22 20:14:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-22 20:14:16] 
[2024-09-22 20:14:16] 2024-09-23 00:14:03,582 | INFO     | **************************************
[2024-09-22 20:14:16] 2024-09-23 00:14:04,085 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-09-22 20:14:16] 2024-09-23 00:14:04,108 | INFO     | sufficient remaining disk space (100912857088 B)
[2024-09-22 20:14:16] 2024-09-23 00:14:04,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-22 20:14:16] 2024-09-23 00:14:04,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-22 20:14:16] 2024-09-23 00:14:04,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-22 20:14:16] 2024-09-23 00:14:04,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-22 20:14:16] 2024-09-23 00:14:04,408 | INFO     | all data control threads have been joined
[2024-09-22 20:14:16] 2024-09-23 00:14:04,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-22 20:14:16] 2024-09-23 00:14:04,445 | INFO     | aborting loop
[2024-09-22 20:14:16] 2024-09-23 00:14:04,586 | INFO     | found 0 job(s) in 20 queues
[2024-09-22 20:14:16] 2024-09-23 00:14:04,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-22 20:14:16] 2024-09-23 00:14:04,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-22 20:14:16] 2024-09-23 00:14:05,077 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-22 20:14:16] 2024-09-23 00:14:05,111 | INFO     | [job] retrieve thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:05,115 | INFO     | [job] queue monitor thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:05,172 | INFO     | [payload] validate_post thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:05,201 | INFO     | all payload control threads have been joined
[2024-09-22 20:14:16] 2024-09-23 00:14:05,213 | INFO     | all job control threads have been joined
[2024-09-22 20:14:16] 2024-09-23 00:14:05,414 | INFO     | [data] control thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:05,449 | INFO     | [payload] execute_payloads thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:05,451 | INFO     | [job] job monitor thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:05,507 | INFO     | [job] create_data_payload thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:05,969 | INFO     | [job] validate thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:06,036 | INFO     | [payload] failed_post thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:06,050 | INFO     | [payload] validate_pre thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:06,119 | INFO     | [data] copytool_out thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:06,207 | INFO     | [payload] control thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:06,218 | INFO     | [job] control thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:06,269 | INFO     | [data] copytool_in thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:06,393 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:09,083 | INFO     | [data] queue_monitor thread has finished
[2024-09-22 20:14:16] 2024-09-23 00:14:10,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865716676416)>', '<ExcThread(monitor, started 139865491871488)>']
[2024-09-22 20:14:16] 2024-09-23 00:14:11,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-22 20:14:16] 2024-09-23 00:14:11,623 | INFO     | [monitor] control thread has ended
[2024-09-22 20:14:16] 2024-09-23 00:14:15,992 | INFO     | all workflow threads have been joined
[2024-09-22 20:14:16] 2024-09-23 00:14:15,992 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-22 20:14:16] 2024-09-23 00:14:15,992 | INFO     | traces error code: 0
[2024-09-22 20:14:16] 2024-09-23 00:14:15,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-22 20:14:16] 2024-09-23 00:14:16,103 [wrapper] ==== pilot stdout END ====
[2024-09-22 20:14:16] 2024-09-23 00:14:16,107 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-22 20:14:16] 2024-09-23 00:14:16,111 [wrapper] pilotpid: 298666
[2024-09-22 20:14:16] 2024-09-23 00:14:16,114 [wrapper] Pilot exit status: 0
[2024-09-22 20:14:16] 2024-09-23 00:14:16,126 [wrapper] pandaids: 6342669186
[2024-09-22 20:14:16] 2024-09-23 00:14:16,193 [wrapper] cleanup supervisor_pilot 157772 298667
[2024-09-22 20:14:16] 2024-09-23 00:14:16,196 [wrapper] Test setup, not cleaning
[2024-09-22 20:14:16] 2024-09-23 00:14:16,199 [wrapper] ==== wrapper stdout END ====
[2024-09-22 20:14:16] 2024-09-23 00:14:16,202 [wrapper] ==== wrapper stderr END ====
[2024-09-22 20:14:16] 2024-09-23 00:14:16,207 [wrapper] apfmon messages muted
[2024-09-22 20:14:16]  *** Error codes and diagnostics ***
[2024-09-22 20:14:16]     "exeErrorCode": 0,
[2024-09-22 20:14:16]     "exeErrorDiag": "",
[2024-09-22 20:14:16]     "pilotErrorCode": 0,
[2024-09-22 20:14:16]     "pilotErrorDiag": "",
[2024-09-22 20:14:16]  *** Listing of results directory ***
[2024-09-22 20:14:16] total 596692
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas    482533 Sep 22 17:32 pilot3.tar.gz
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas      5655 Sep 22 17:42 queuedata.json
[2024-09-22 20:14:16] -rwx------ 1 boincer umatlas     33679 Sep 22 17:42 runpilot2-wrapper.sh
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas       100 Sep 22 19:17 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-22 20:14:16] -rwxr-xr-x 1 boincer umatlas      7986 Sep 22 19:17 run_atlas
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas       105 Sep 22 19:17 job.xml
[2024-09-22 20:14:16] -rw-r--r-- 2 boincer umatlas 442867775 Sep 22 19:17 EVNT.41078612._000860.pool.root.1
[2024-09-22 20:14:16] -rw-r--r-- 2 boincer umatlas     17539 Sep 22 19:17 start_atlas.sh
[2024-09-22 20:14:16] drwxrwx--x 2 boincer umatlas      4096 Sep 22 19:17 shared
[2024-09-22 20:14:16] -rw-r--r-- 2 boincer umatlas    495949 Sep 22 19:17 input.tar.gz
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas         0 Sep 22 19:17 boinc_lockfile
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas      2550 Sep 22 19:17 pandaJob.out
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas       424 Sep 22 19:17 setup.sh.local
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas   1009765 Sep 22 19:17 agis_schedconf.cvmfs.json
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas   1618603 Sep 22 19:17 agis_ddmendpoints.agis.ALL.json
[2024-09-22 20:14:16] drwx------ 4 boincer umatlas      4096 Sep 22 19:17 pilot3
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas 163057487 Sep 22 20:13 HITS.41078614._025790.pool.root.1
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas       530 Sep 22 20:13 boinc_task_state.xml
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas      1052 Sep 22 20:13 memory_monitor_summary.json
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas        95 Sep 22 20:13 pilot_heartbeat.json
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas    280716 Sep 22 20:13 log.41078614._025790.job.log.tgz.1
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas      6298 Sep 22 20:13 init_data.xml
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas      8192 Sep 22 20:13 boinc_mmap_file
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas        27 Sep 22 20:13 wrapper_checkpoint.txt
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas      7763 Sep 22 20:14 heartbeat.json
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas      4216 Sep 22 20:14 pilotlog.txt
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas    339481 Sep 22 20:14 log.41078614._025790.job.log.1
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas       357 Sep 22 20:14 output.list
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas       620 Sep 22 20:14 runtime_log
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas    634880 Sep 22 20:14 result.tar.gz
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas     11010 Sep 22 20:14 runtime_log.err
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas       646 Sep 22 20:14 2zcNDmpWjC6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmh4fKDmNLH4nm.diag
[2024-09-22 20:14:16] -rw-r--r-- 1 boincer umatlas     21363 Sep 22 20:14 stderr.txt
[2024-09-22 20:14:16] HITS file was successfully produced:
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas 163057487 Sep 22 20:13 shared/HITS.pool.root.1
[2024-09-22 20:14:16]  *** Contents of shared directory: ***
[2024-09-22 20:14:16] total 592864
[2024-09-22 20:14:16] -rw-r--r-- 2 boincer umatlas 442867775 Sep 22 19:17 ATLAS.root_0
[2024-09-22 20:14:16] -rw-r--r-- 2 boincer umatlas     17539 Sep 22 19:17 start_atlas.sh
[2024-09-22 20:14:16] -rw-r--r-- 2 boincer umatlas    495949 Sep 22 19:17 input.tar.gz
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas 163057487 Sep 22 20:13 HITS.pool.root.1
[2024-09-22 20:14:16] -rw------- 1 boincer umatlas    634880 Sep 22 20:14 result.tar.gz
20:14:17 (294932): run_atlas exited; CPU time 20455.957553
20:14:17 (294932): called boinc_finish(0)

</stderr_txt>
]]>

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