Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:25:45 (5723): wrapper (7.7.26015): starting
16:25:45 (5723): wrapper: running run_atlas (--nthreads 8)
[2024-09-22 16:25:45] Arguments: --nthreads 8
[2024-09-22 16:25:45] Threads: 8
[2024-09-22 16:25:45] Checking for CVMFS
[2024-09-22 16:25:45] Probing /cvmfs/atlas.cern.ch... OK
[2024-09-22 16:25:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-09-22 16:25:45] Running cvmfs_config stat atlas.cern.ch
[2024-09-22 16:25:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-09-22 16:25:46] 2.11.2.0 2871 82021 120476 137534 3 55 15947962 20275200 1 130560 0 42073354 99.958 12908100 35377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-09-22 16:25:46] CVMFS is ok
[2024-09-22 16:25:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-09-22 16:25:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-09-22 16:25:46] Further information can be found at the LHC@home message board.
[2024-09-22 16:25:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-09-22 16:25:46] Checking for apptainer binary...
[2024-09-22 16:25:46] Using apptainer found in PATH at /usr/bin/apptainer
[2024-09-22 16:25:46] Running /usr/bin/apptainer --version
[2024-09-22 16:25:46] apptainer version 1.3.2-1.el7
[2024-09-22 16:25:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-09-22 16:25:47] c-204-34.aglt2.org
[2024-09-22 16:25:47] apptainer works
[2024-09-22 16:25:47] Set ATHENA_PROC_NUMBER=8
[2024-09-22 16:25:47] Set ATHENA_CORE_NUMBER=8
[2024-09-22 16:25:47] Starting ATLAS job with PandaID=6342559059
[2024-09-22 16:25:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-09-22 17:59:19]  *** The last 200 lines of the pilot log: ***
[2024-09-22 17:59:19]  filetype=log
[2024-09-22 17:59:19]  guid=9d3b010e-e841-4b91-b751-04173beea91f
[2024-09-22 17:59:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-09-22 17:59:19]  is_tar=False
[2024-09-22 17:59:19]  lfn=log.41078614._024346.job.log.tgz.1
[2024-09-22 17:59:19]  mtime=0
[2024-09-22 17:59:19]  protocol_id=None
[2024-09-22 17:59:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-09-22 17:59:19]  replicas=None
[2024-09-22 17:59:19]  scope=mc23_13p6TeV
[2024-09-22 17:59:19]  status=None
[2024-09-22 17:59:19]  status_code=0
[2024-09-22 17:59:19]  storage_token=
[2024-09-22 17:59:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6342559059/log.41078614._024346.job.log.tgz.1
[2024-09-22 17:59:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/dd/log.41078614._024346.job.log.tgz.1
[2024-09-22 17:59:19]  workdir=None
[2024-09-22 17:59:19] ]
[2024-09-22 17:59:19] 2024-09-22 21:58:58,787 | INFO     | transferring file log.41078614._024346.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6342559059/log.41078614._024346.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-09-22 17:59:19] 2024-09-22 21:58:58,787 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6342559059/log.41078614._024346.job.log.tgz.1 /tmp/boinchome/slots/0/log.41078614._024346.job
[2024-09-22 17:59:19] 2024-09-22 21:58:58,815 | INFO     | adding to output.list: log.41078614._024346.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/dd/log.41078614._024346.job.log.tg
[2024-09-22 17:59:19] 2024-09-22 21:58:58,817 | INFO     | summary of transferred files:
[2024-09-22 17:59:19] 2024-09-22 21:58:58,817 | INFO     |  -- lfn=log.41078614._024346.job.log.tgz.1, status_code=0, status=transferred
[2024-09-22 17:59:19] 2024-09-22 21:58:58,817 | INFO     | stage-out finished correctly
[2024-09-22 17:59:19] 2024-09-22 21:58:58,912 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-09-22 17:59:19] 2024-09-22 21:58:59,580 | INFO     | job 6342559059 has state=finished
[2024-09-22 17:59:19] 2024-09-22 21:58:59,581 | INFO     | preparing for final server update for job 6342559059 in state='finished'
[2024-09-22 17:59:19] 2024-09-22 21:58:59,581 | INFO     | this job has now completed (state=finished)
[2024-09-22 17:59:19] 2024-09-22 21:58:59,581 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-09-22 17:59:19] 2024-09-22 21:58:59,582 | INFO     | log transfer has been attempted: DONE
[2024-09-22 17:59:19] 2024-09-22 21:58:59,582 | INFO     | job 6342559059 has finished - writing final server update
[2024-09-22 17:59:19] 2024-09-22 21:58:59,582 | INFO     | total number of processed events: 400 (read)
[2024-09-22 17:59:19] 2024-09-22 21:58:59,584 | INFO     | executing command: lscpu
[2024-09-22 17:59:19] 2024-09-22 21:58:59,614 | INFO     | found 8 cores (4 cores per socket, 2 sockets)
[2024-09-22 17:59:19] 2024-09-22 21:58:59,614 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-09-22 17:59:19] 2024-09-22 21:58:59,656 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-09-22 17:59:19] 2024-09-22 21:59:00,263 | INFO     | monitor loop #422: job 0:6342559059 is in state 'finished'
[2024-09-22 17:59:19] 2024-09-22 21:59:00,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 17:59:19] 2024-09-22 21:59:02,767 | INFO     | monitor loop #423: job 0:6342559059 is in state 'finished'
[2024-09-22 17:59:19] 2024-09-22 21:59:02,767 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 17:59:19] 2024-09-22 21:59:05,270 | INFO     | monitor loop #424: job 0:6342559059 is in state 'finished'
[2024-09-22 17:59:19] 2024-09-22 21:59:05,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-09-22 17:59:19] 2024-09-22 21:59:05,347 | INFO     | CPU arch script returned: x86-64-v2
[2024-09-22 17:59:19] 2024-09-22 21:59:05,347 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6342559059/memory_monitor_summary.json (trf name=prmon)
[2024-09-22 17:59:19] 2024-09-22 21:59:05,348 | INFO     | extracted standard info from prmon json
[2024-09-22 17:59:19] 2024-09-22 21:59:05,349 | INFO     | extracted standard memory fields from prmon json
[2024-09-22 17:59:19] 2024-09-22 21:59:05,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2024-09-22 17:59:19] 2024-09-22 21:59:05,349 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-09-22 17:59:19] 2024-09-22 21:59:05,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-09-22 17:59:19] 2024-09-22 21:59:05,352 | INFO     | fitting pss+swap vs Time
[2024-09-22 17:59:19] 2024-09-22 21:59:05,353 | INFO     | model: linear, x: [1727037100.0, 1727037161.0, 1727037222.0, 1727037283.0, 1727037344.0, 1727037405.0, 1727037466.0, 1727037527.0, 1727037588.0, 1727037649.0, 1727
[2024-09-22 17:59:19] 2024-09-22 21:59:05,353 | INFO     | sum of square deviations: 183761585.0
[2024-09-22 17:59:19] 2024-09-22 21:59:05,353 | INFO     | sum of deviations: -9747582321.499998
[2024-09-22 17:59:19] 2024-09-22 21:59:05,353 | INFO     | mean x: 1727039631.5
[2024-09-22 17:59:19] 2024-09-22 21:59:05,353 | INFO     | mean y: 2654017.130952381
[2024-09-22 17:59:19] 2024-09-22 21:59:05,354 | INFO     | -- intersect: 91612992383.22238
[2024-09-22 17:59:19] 2024-09-22 21:59:05,354 | INFO     | intersect: 91612992383.22238
[2024-09-22 17:59:19] 2024-09-22 21:59:05,354 | INFO     | chi2: 0.22082991044215072
[2024-09-22 17:59:19] 2024-09-22 21:59:05,354 | INFO     | -- intersect: 91612992383.22238
[2024-09-22 17:59:19] 2024-09-22 21:59:05,354 | INFO     | current memory leak: -53.04 B/s (using 84 data points, chi2=0.22)
[2024-09-22 17:59:19] 2024-09-22 21:59:05,355 | INFO     | ..............................
[2024-09-22 17:59:19] 2024-09-22 21:59:05,355 | INFO     | . Timing measurements:
[2024-09-22 17:59:19] 2024-09-22 21:59:05,355 | INFO     | . get job = 0 s
[2024-09-22 17:59:19] 2024-09-22 21:59:05,355 | INFO     | . initial setup = 2 s
[2024-09-22 17:59:19] 2024-09-22 21:59:05,355 | INFO     | . payload setup = 9 s
[2024-09-22 17:59:19] 2024-09-22 21:59:05,355 | INFO     | . stage-in = 0 s
[2024-09-22 17:59:19] 2024-09-22 21:59:05,355 | INFO     | . payload execution = 5544 s
[2024-09-22 17:59:19] 2024-09-22 21:59:05,355 | INFO     | . stage-out = 0 s
[2024-09-22 17:59:19] 2024-09-22 21:59:05,356 | INFO     | . log creation = 0 s
[2024-09-22 17:59:19] 2024-09-22 21:59:05,356 | INFO     | ..............................
[2024-09-22 17:59:19] 2024-09-22 21:59:05,449 | INFO     | 
[2024-09-22 17:59:19] 2024-09-22 21:59:05,449 | INFO     | job summary report
[2024-09-22 17:59:19] 2024-09-22 21:59:05,450 | INFO     | --------------------------------------------------
[2024-09-22 17:59:19] 2024-09-22 21:59:05,450 | INFO     | PanDA job id: 6342559059
[2024-09-22 17:59:19] 2024-09-22 21:59:05,450 | INFO     | task id: 41078614
[2024-09-22 17:59:19] 2024-09-22 21:59:05,450 | INFO     | errors: (none)
[2024-09-22 17:59:19] 2024-09-22 21:59:05,450 | INFO     | status: LOG_TRANSFER = DONE 
[2024-09-22 17:59:19] 2024-09-22 21:59:05,450 | INFO     | pilot state: finished 
[2024-09-22 17:59:19] 2024-09-22 21:59:05,451 | INFO     | transexitcode: 0
[2024-09-22 17:59:19] 2024-09-22 21:59:05,451 | INFO     | exeerrorcode: 0
[2024-09-22 17:59:19] 2024-09-22 21:59:05,451 | INFO     | exeerrordiag: 
[2024-09-22 17:59:19] 2024-09-22 21:59:05,451 | INFO     | exitcode: 0
[2024-09-22 17:59:19] 2024-09-22 21:59:05,451 | INFO     | exitmsg: OK
[2024-09-22 17:59:19] 2024-09-22 21:59:05,451 | INFO     | cpuconsumptiontime: 39830 s
[2024-09-22 17:59:19] 2024-09-22 21:59:05,452 | INFO     | nevents: 400
[2024-09-22 17:59:19] 2024-09-22 21:59:05,452 | INFO     | neventsw: 0
[2024-09-22 17:59:19] 2024-09-22 21:59:05,452 | INFO     | pid: 17371
[2024-09-22 17:59:19] 2024-09-22 21:59:05,452 | INFO     | pgrp: 17371
[2024-09-22 17:59:19] 2024-09-22 21:59:05,452 | INFO     | corecount: 8
[2024-09-22 17:59:19] 2024-09-22 21:59:05,452 | INFO     | event service: False
[2024-09-22 17:59:19] 2024-09-22 21:59:05,452 | INFO     | sizes: {0: 2439977, 1: 2440232, 7: 2440438, 12: 2440466, 5557: 2466836, 5558: 2466835, 5559: 2476035, 5566: 2476149}
[2024-09-22 17:59:19] 2024-09-22 21:59:05,453 | INFO     | --------------------------------------------------
[2024-09-22 17:59:19] 2024-09-22 21:59:05,453 | INFO     | 
[2024-09-22 17:59:19] 2024-09-22 21:59:05,453 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-09-22 17:59:19] 2024-09-22 21:59:05,481 | INFO     | queue jobs had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,482 | INFO     | queue payloads had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,482 | INFO     | queue data_in had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,482 | INFO     | queue data_out had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,483 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,483 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,483 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,483 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,483 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,484 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,484 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,484 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,484 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,485 | INFO     | queue completed_jobids has 1 job(s)
[2024-09-22 17:59:19] 2024-09-22 21:59:05,485 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,485 | INFO     | queue messages had 0 job(s) [purged]
[2024-09-22 17:59:19] 2024-09-22 21:59:05,486 | INFO     | job 6342559059 has completed (purged errors)
[2024-09-22 17:59:19] 2024-09-22 21:59:05,486 | INFO     | overall cleanup function is called
[2024-09-22 17:59:19] 2024-09-22 21:59:06,494 | INFO     | --- collectZombieJob: --- 10, [17371]
[2024-09-22 17:59:19] 2024-09-22 21:59:06,494 | INFO     | zombie collector waiting for pid 17371
[2024-09-22 17:59:19] 2024-09-22 21:59:06,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-09-22 17:59:19] 2024-09-22 21:59:06,495 | INFO     | collected zombie processes
[2024-09-22 17:59:19] 2024-09-22 21:59:06,495 | INFO     | will  attempt to kill all subprocesses of pid=17371
[2024-09-22 17:59:19] 2024-09-22 21:59:06,567 | INFO     | process IDs to be killed: [17371] (in reverse order)
[2024-09-22 17:59:19] 2024-09-22 21:59:06,625 | WARNING  | found no corresponding commands to process id(s)
[2024-09-22 17:59:19] 2024-09-22 21:59:06,626 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-09-22 17:59:19] 2024-09-22 21:59:06,630 | INFO     | did not find any defunct processes belonging to 17371
[2024-09-22 17:59:19] 2024-09-22 21:59:06,633 | INFO     | did not find any defunct processes belonging to 17371
[2024-09-22 17:59:19] 2024-09-22 21:59:06,634 | INFO     | ready for new job
[2024-09-22 17:59:19] 2024-09-22 21:59:06,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-09-22 17:59:19] 2024-09-22 21:59:06,635 | INFO     | **************************************
[2024-09-22 17:59:19] 2024-09-22 21:59:06,635 | INFO     | ***  PanDA Pilot version 3.8.1.66  ***
[2024-09-22 17:59:19] 2024-09-22 21:59:06,636 | INFO     | **************************************
[2024-09-22 17:59:19] 2024-09-22 21:59:06,636 | INFO     | 
[2024-09-22 17:59:19] 2024-09-22 21:59:06,636 | INFO     | architecture information:
[2024-09-22 17:59:19] 2024-09-22 21:59:06,637 | INFO     | executing command: cat /etc/os-release
[2024-09-22 17:59:19] 2024-09-22 21:59:06,657 | INFO     | cat /etc/os-release:
[2024-09-22 17:59:19] NAME="CentOS Linux"
[2024-09-22 17:59:19] VERSION="7 (Core)"
[2024-09-22 17:59:19] ID="centos"
[2024-09-22 17:59:19] ID_LIKE="rhel fedora"
[2024-09-22 17:59:19] VERSION_ID="7"
[2024-09-22 17:59:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-09-22 17:59:19] ANSI_COLOR="0;31"
[2024-09-22 17:59:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-09-22 17:59:19] HOME_URL="https://www.centos.org/"
[2024-09-22 17:59:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-09-22 17:59:19] 
[2024-09-22 17:59:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-09-22 17:59:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-09-22 17:59:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-09-22 17:59:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-09-22 17:59:19] 
[2024-09-22 17:59:19] 2024-09-22 21:59:06,658 | INFO     | **************************************
[2024-09-22 17:59:19] 2024-09-22 21:59:07,160 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-09-22 17:59:19] 2024-09-22 21:59:07,182 | INFO     | sufficient remaining disk space (18231590912 B)
[2024-09-22 17:59:19] 2024-09-22 21:59:07,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-09-22 17:59:19] 2024-09-22 21:59:07,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-09-22 17:59:19] 2024-09-22 21:59:07,183 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-09-22 17:59:19] 2024-09-22 21:59:07,184 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-09-22 17:59:19] 2024-09-22 21:59:07,184 | INFO     | found 0 job(s) in 20 queues
[2024-09-22 17:59:19] 2024-09-22 21:59:07,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-09-22 17:59:19] 2024-09-22 21:59:07,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-09-22 17:59:19] 2024-09-22 21:59:07,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-09-22 17:59:19] 2024-09-22 21:59:07,185 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-09-22 17:59:19] 2024-09-22 21:59:07,186 | INFO     | aborting loop
[2024-09-22 17:59:19] 2024-09-22 21:59:07,209 | INFO     | all data control threads have been joined
[2024-09-22 17:59:19] 2024-09-22 21:59:07,417 | INFO     | all payload control threads have been joined
[2024-09-22 17:59:19] 2024-09-22 21:59:07,801 | INFO     | all job control threads have been joined
[2024-09-22 17:59:19] 2024-09-22 21:59:08,186 | INFO     | [job] retrieve thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:08,189 | INFO     | [job] queue monitor thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:08,191 | INFO     | [job] job monitor thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:08,210 | INFO     | [data] control thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:08,418 | INFO     | [payload] control thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:08,673 | INFO     | [payload] failed_post thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:08,806 | INFO     | [job] control thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:08,871 | INFO     | [job] create_data_payload thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:08,879 | INFO     | [job] validate thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:08,879 | INFO     | [data] copytool_in thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:08,897 | INFO     | [payload] execute_payloads thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:09,183 | INFO     | [payload] run_realtimelog thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:09,189 | INFO     | [data] copytool_out thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:09,228 | INFO     | [payload] validate_pre thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:09,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-09-22 17:59:19] 2024-09-22 21:59:09,690 | INFO     | [payload] validate_post thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:13,509 | INFO     | [data] queue_monitor thread has finished
[2024-09-22 17:59:19] 2024-09-22 21:59:14,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745395509056)>', '<ExcThread(monitor, started 139744721749760)>']
[2024-09-22 17:59:19] 2024-09-22 21:59:14,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-09-22 17:59:19] 2024-09-22 21:59:14,219 | INFO     | [monitor] control thread has ended
[2024-09-22 17:59:19] 2024-09-22 21:59:19,188 | INFO     | all workflow threads have been joined
[2024-09-22 17:59:19] 2024-09-22 21:59:19,188 | INFO     | end of generic workflow (traces error code: 0)
[2024-09-22 17:59:19] 2024-09-22 21:59:19,195 | INFO     | traces error code: 0
[2024-09-22 17:59:19] 2024-09-22 21:59:19,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-09-22 17:59:19] 2024-09-22 21:59:19,291 [wrapper] ==== pilot stdout END ====
[2024-09-22 17:59:19] 2024-09-22 21:59:19,295 [wrapper] ==== wrapper stdout RESUME ====
[2024-09-22 17:59:19] 2024-09-22 21:59:19,300 [wrapper] pilotpid: 9694
[2024-09-22 17:59:19] 2024-09-22 21:59:19,304 [wrapper] Pilot exit status: 0
[2024-09-22 17:59:19] 2024-09-22 21:59:19,323 [wrapper] pandaids: 6342559059
[2024-09-22 17:59:19] 2024-09-22 21:59:19,369 [wrapper] cleanup supervisor_pilot  8137 9695
[2024-09-22 17:59:19] 2024-09-22 21:59:19,373 [wrapper] Test setup, not cleaning
[2024-09-22 17:59:19] 2024-09-22 21:59:19,378 [wrapper] ==== wrapper stdout END ====
[2024-09-22 17:59:19] 2024-09-22 21:59:19,383 [wrapper] ==== wrapper stderr END ====
[2024-09-22 17:59:19] 2024-09-22 21:59:19,392 [wrapper] apfmon messages muted
[2024-09-22 17:59:19]  *** Error codes and diagnostics ***
[2024-09-22 17:59:19]     "exeErrorCode": 0,
[2024-09-22 17:59:19]     "exeErrorDiag": "",
[2024-09-22 17:59:19]     "pilotErrorCode": 0,
[2024-09-22 17:59:19]     "pilotErrorDiag": "",
[2024-09-22 17:59:19]  *** Listing of results directory ***
[2024-09-22 17:59:19] total 591460
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas    482533 Sep 22 14:01 pilot3.tar.gz
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas      5655 Sep 22 14:02 queuedata.json
[2024-09-22 17:59:19] -rwx------ 1 boincer umatlas     33679 Sep 22 14:06 runpilot2-wrapper.sh
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas       100 Sep 22 16:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-09-22 17:59:19] -rwxr-xr-x 1 boincer umatlas      7986 Sep 22 16:25 run_atlas
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas       105 Sep 22 16:25 job.xml
[2024-09-22 17:59:19] -rw-r--r-- 2 boincer umatlas 439791913 Sep 22 16:25 EVNT.41078612._000731.pool.root.1
[2024-09-22 17:59:19] -rw-r--r-- 2 boincer umatlas     17539 Sep 22 16:25 start_atlas.sh
[2024-09-22 17:59:19] drwxrwx--x 2 boincer umatlas      4096 Sep 22 16:25 shared
[2024-09-22 17:59:19] -rw-r--r-- 2 boincer umatlas    495958 Sep 22 16:25 input.tar.gz
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas         0 Sep 22 16:25 boinc_lockfile
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas      2550 Sep 22 16:25 pandaJob.out
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas       462 Sep 22 16:25 setup.sh.local
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas   1009478 Sep 22 16:26 agis_schedconf.cvmfs.json
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas   1618603 Sep 22 16:26 agis_ddmendpoints.agis.ALL.json
[2024-09-22 17:59:19] drwx------ 4 boincer umatlas      4096 Sep 22 16:26 pilot3
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas      5905 Sep 22 17:54 init_data.xml
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas        95 Sep 22 17:58 pilot_heartbeat.json
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas 160339086 Sep 22 17:58 HITS.41078614._024346.pool.root.1
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas      1048 Sep 22 17:58 memory_monitor_summary.json
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas       531 Sep 22 17:58 boinc_task_state.xml
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas    326085 Sep 22 17:58 log.41078614._024346.job.log.tgz.1
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas      7763 Sep 22 17:59 heartbeat.json
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas      8192 Sep 22 17:59 boinc_mmap_file
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas        27 Sep 22 17:59 wrapper_checkpoint.txt
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas      4338 Sep 22 17:59 pilotlog.txt
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas    509419 Sep 22 17:59 log.41078614._024346.job.log.1
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas       357 Sep 22 17:59 output.list
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas       620 Sep 22 17:59 runtime_log
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas    849920 Sep 22 17:59 result.tar.gz
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas     11375 Sep 22 17:59 runtime_log.err
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas       646 Sep 22 17:59 avJLDm79fC6nsSi4ap6QjLDmwznN0nGgGQJmDC4LDmgffKDmCXOHrn.diag
[2024-09-22 17:59:19] -rw-r--r-- 1 boincer umatlas     21392 Sep 22 17:59 stderr.txt
[2024-09-22 17:59:19] HITS file was successfully produced:
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas 160339086 Sep 22 17:58 shared/HITS.pool.root.1
[2024-09-22 17:59:19]  *** Contents of shared directory: ***
[2024-09-22 17:59:19] total 587420
[2024-09-22 17:59:19] -rw-r--r-- 2 boincer umatlas 439791913 Sep 22 16:25 ATLAS.root_0
[2024-09-22 17:59:19] -rw-r--r-- 2 boincer umatlas     17539 Sep 22 16:25 start_atlas.sh
[2024-09-22 17:59:19] -rw-r--r-- 2 boincer umatlas    495958 Sep 22 16:25 input.tar.gz
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas 160339086 Sep 22 17:58 HITS.pool.root.1
[2024-09-22 17:59:19] -rw------- 1 boincer umatlas    849920 Sep 22 17:59 result.tar.gz
17:59:20 (5723): run_atlas exited; CPU time 39708.442948
17:59:20 (5723): called boinc_finish(0)

</stderr_txt>
]]>

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