Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2024-09-19 12:37:30 (16768): Detected: vboxwrapper 26206
2024-09-19 12:37:30 (16768): Detected: BOINC client v7.16.5
2024-09-19 12:37:30 (16768): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2024-09-19 12:37:31 (16768): Successfully copied 'init_data.xml' to the shared directory.
2024-09-19 12:37:31 (16768): Create VM. (boinc_ca5c807855cdf04e, slot#2)
2024-09-19 12:37:32 (16768): Setting Memory Size for VM. (4400MB)
2024-09-19 12:37:32 (16768): Setting CPU Count for VM. (4)
2024-09-19 12:37:32 (16768): Setting Chipset Options for VM.
2024-09-19 12:37:32 (16768): Setting Graphics Controller Options for VM.
2024-09-19 12:37:33 (16768): Setting Boot Options for VM.
2024-09-19 12:37:33 (16768): Setting Network Configuration for NAT.
2024-09-19 12:37:33 (16768): Enabling VM Network Access.
2024-09-19 12:37:33 (16768): Disabling USB Support for VM.
2024-09-19 12:37:34 (16768): Disabling COM Port Support for VM.
2024-09-19 12:37:34 (16768): Disabling LPT Port Support for VM.
2024-09-19 12:37:34 (16768): Disabling Audio Support for VM.
2024-09-19 12:37:34 (16768): Disabling Clipboard Support for VM.
2024-09-19 12:37:35 (16768): Disabling Drag and Drop Support for VM.
2024-09-19 12:37:35 (16768): Adding storage controller(s) to VM.
2024-09-19 12:37:35 (16768): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-09-19 12:37:36 (16768): Adding VirtualBox Guest Additions to VM.
2024-09-19 12:37:36 (16768): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-09-19 12:37:36 (16768): forwarding host port 52941 to guest port 80
2024-09-19 12:37:36 (16768): Enabling remote desktop for VM.
2024-09-19 12:37:37 (16768): Enabling shared directory for VM.
2024-09-19 12:37:37 (16768): Starting VM using VBoxManage interface. (boinc_ca5c807855cdf04e, slot#2)
2024-09-19 12:37:42 (16768): Successfully started VM. (PID = '14868')
2024-09-19 12:37:42 (16768): Reporting VM Process ID to BOINC.
2024-09-19 12:37:42 (16768): Guest Log: BIOS: VirtualBox 5.2.44
2024-09-19 12:37:42 (16768): Guest Log: CPUID EDX: 0x178bfbff
2024-09-19 12:37:42 (16768): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-09-19 12:37:42 (16768): VM state change detected. (old = 'poweredoff', new = 'running')
2024-09-19 12:37:42 (16768): Detected: Web Application Enabled (http://localhost:52941)
2024-09-19 12:37:42 (16768): Detected: Remote Desktop Enabled (localhost:52942)
2024-09-19 12:37:42 (16768): Preference change detected
2024-09-19 12:37:42 (16768): Setting CPU throttle for VM. (100%)
2024-09-19 12:37:43 (16768): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-09-19 12:37:44 (16768): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-09-19 12:37:44 (16768): Guest Log: BIOS: Booting from Hard Disk...
2024-09-19 12:37:47 (16768): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-09-19 12:37:47 (16768): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-09-19 12:37:47 (16768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-09-19 12:37:53 (16768): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-09-19 12:37:53 (16768): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-09-19 12:37:59 (16768): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-09-19 12:37:59 (16768): Guest Log: 00:00:00.000169 main     Log opened 2024-09-19T12:37:57.707787000Z
2024-09-19 12:37:59 (16768): Guest Log: 00:00:00.000273 main     OS Product: Linux
2024-09-19 12:37:59 (16768): Guest Log: 00:00:00.000317 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-09-19 12:37:59 (16768): Guest Log: 00:00:00.000349 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-09-19 12:37:59 (16768): Guest Log: 00:00:00.000377 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-09-19 12:37:59 (16768): Guest Log: 00:00:00.000378 main     Process ID: 1306
2024-09-19 12:37:59 (16768): Guest Log: 00:00:00.000379 main     Package type: LINUX_64BITS_GENERIC
2024-09-19 12:37:59 (16768): Guest Log: 00:00:00.001802 main     5.2.32 r132073 started. Verbose level = 0
2024-09-19 12:37:59 (16768): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-09-19 12:37:59 (16768): Guest Log: [INFO] Mounting shared directory
2024-09-19 12:37:59 (16768): Guest Log: [INFO] Checking for init_data.xml
2024-09-19 12:38:03 (16768): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-09-19 12:38:03 (16768): Guest Log: [INFO] Detected branch: prod
2024-09-19 12:38:03 (16768): Guest Log: This is the prod version of the ATLAS job wrapper
2024-09-19 12:38:03 (16768): Guest Log: Copying input files
2024-09-19 12:38:07 (16768): Guest Log: Copied input files into RunAtlas.
2024-09-19 12:38:07 (16768): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-09-19 12:38:07 (16768): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-09-19 12:38:07 (16768): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-09-19 12:38:07 (16768): Guest Log: Further information can be found at the LHC@home message board.
2024-09-19 12:38:09 (16768): Guest Log: 00:00:10.003596 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 229 429 000ns (GuestNow=1 726 738 689 481 363 000 ns GuestLast=1 726 749 477 710 792 000 ns fSetTimeLastLoop=true )
2024-09-19 12:38:17 (16768): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-09-19 12:38:18 (16768): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-09-19 12:38:18 (16768): Guest Log: 2.6.3.0 1587 0 32228 137406 4 1 3117432 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-09-19 12:38:18 (16768): Guest Log: copied the webapp to /var/www
2024-09-19 12:38:18 (16768): Guest Log: ATHENA_PROC_NUMBER=4
2024-09-19 12:38:18 (16768): Guest Log: ATHENA_CORE_NUMBER=4
2024-09-19 12:38:19 (16768): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-09-19 12:38:19 (16768): Guest Log:  *** Starting ATLAS job. (PandaID=6335632192 taskID=40994252) ***
2024-09-19 14:17:46 (16768): Status Report: Elapsed Time: '6000.000000'
2024-09-19 14:17:46 (16768): Status Report: CPU Time: '15305.218750'
2024-09-19 15:57:49 (16768): Status Report: Elapsed Time: '12000.000000'
2024-09-19 15:57:49 (16768): Status Report: CPU Time: '34706.125000'
2024-09-19 17:37:53 (16768): Status Report: Elapsed Time: '18000.000000'
2024-09-19 17:37:53 (16768): Status Report: CPU Time: '53972.906250'
2024-09-19 19:17:56 (16768): Status Report: Elapsed Time: '24000.000000'
2024-09-19 19:17:56 (16768): Status Report: CPU Time: '73195.140625'
2024-09-19 20:58:00 (16768): Status Report: Elapsed Time: '30000.000000'
2024-09-19 20:58:00 (16768): Status Report: CPU Time: '96715.500000'
2024-09-19 22:38:03 (16768): Status Report: Elapsed Time: '36000.000000'
2024-09-19 22:38:03 (16768): Status Report: CPU Time: '116211.796875'
2024-09-20 00:18:07 (16768): Status Report: Elapsed Time: '42000.000000'
2024-09-20 00:18:07 (16768): Status Report: CPU Time: '136183.437500'
2024-09-20 01:58:11 (16768): Status Report: Elapsed Time: '48000.000000'
2024-09-20 01:58:11 (16768): Status Report: CPU Time: '158115.421875'
2024-09-20 03:38:19 (16768): Status Report: Elapsed Time: '54000.000000'
2024-09-20 03:38:19 (16768): Status Report: CPU Time: '181831.109375'
2024-09-20 04:11:47 (16768): Guest Log:  *** Job finished ***
2024-09-20 04:11:47 (16768): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:39,689 | INFO     | [data] copytool_out thread has finished
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:40,323 | INFO     | [job] queue monitor thread has finished
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:40,323 | INFO     | [data] queue_monitor thread has finished
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:40,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014943369024)>', '<ExcThread(monitor, started 140013828294400)>']
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:41,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:41,325 | INFO     | [monitor] control thread has ended
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:45,771 | INFO     | all workflow threads have been joined
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:45,771 | INFO     | end of generic workflow (traces error code: 0)
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:45,771 | INFO     | traces error code: 0
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:45,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:45,894 [wrapper] ==== pilot stdout END ====
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:45,908 [wrapper] ==== wrapper stdout RESUME ====
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:45,915 [wrapper] pilotpid: 5905
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:45,927 [wrapper] Pilot exit status: 0
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:46,015 [wrapper] pandaids: 6335632192
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:46,146 [wrapper] cleanup supervisor_pilot 15532 5906
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:46,153 [wrapper] Test setup, not cleaning
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:46,175 [wrapper] ==== wrapper stdout END ====
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:46,182 [wrapper] ==== wrapper stderr END ====
2024-09-20 04:11:47 (16768): Guest Log: 2024-09-20 01:11:46,241 [wrapper] apfmon messages muted
2024-09-20 04:11:47 (16768): Guest Log:  *** Error codes and diagnostics ***
2024-09-20 04:11:47 (16768): Guest Log:     "exeErrorCode": 0,
2024-09-20 04:11:47 (16768): Guest Log:     "exeErrorDiag": "",
2024-09-20 04:11:47 (16768): Guest Log:     "pilotErrorCode": 0,
2024-09-20 04:11:47 (16768): Guest Log:     "pilotErrorDiag": "",
2024-09-20 04:11:47 (16768): Guest Log:  *** Listing of results directory ***
2024-09-20 04:11:47 (16768): Guest Log: total 359492
2024-09-20 04:11:47 (16768): Guest Log: -rw-r--r--. 1 atlas atlas    482533 Sep 17 10:42 pilot3.tar.gz
2024-09-20 04:11:47 (16768): Guest Log: -rwx------. 1 atlas atlas     33679 Sep 17 11:00 runpilot2-wrapper.sh
2024-09-20 04:11:47 (16768): Guest Log: -rw-r--r--. 1 atlas atlas      5655 Sep 17 11:01 queuedata.json
2024-09-20 04:11:47 (16768): Guest Log: -rwxr-xr-x. 1 atlas atlas      9161 Sep 19 09:38 init_data.xml
2024-09-20 04:11:47 (16768): Guest Log: -rwxr-xr-x. 1 atlas atlas    495972 Sep 19 09:38 input.tar.gz
2024-09-20 04:11:47 (16768): Guest Log: -rwxr-xr-x. 1 atlas atlas     17539 Sep 19 09:38 start_atlas.sh
2024-09-20 04:11:47 (16768): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Sep 19 09:38 EVNT.40994249._002715.pool.root.1 -> /data/./ATLAS.root_0
2024-09-20 04:11:47 (16768): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Sep 19 09:38 pandaJob.out
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas       424 Sep 19 09:38 setup.sh.local
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas   1011843 Sep 19 09:39 agis_schedconf.cvmfs.json
2024-09-20 04:11:47 (16768): Guest Log: drwx------. 4 atlas atlas      4096 Sep 19 09:39 pilot3
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas 349826747 Sep 20 01:10 HITS.40994252._120494.pool.root.1
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas      1031 Sep 20 01:11 memory_monitor_summary.json
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas   1623856 Sep 20 01:11 agis_ddmendpoints.agis.ALL.json
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas    761798 Sep 20 01:11 log.40994252._120494.job.log.tgz.1
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas        95 Sep 20 01:11 pilot_heartbeat.json
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas      7749 Sep 20 01:11 heartbeat.json
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas      4398 Sep 20 01:11 pilotlog.txt
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas   6490430 Sep 20 01:11 log.40994252._120494.job.log.1
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas       357 Sep 20 01:11 output.list
2024-09-20 04:11:47 (16768): Guest Log: -rw-r--r--. 1 atlas atlas       620 Sep 20 01:11 runtime_log
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas   7270400 Sep 20 01:11 result.tar.gz
2024-09-20 04:11:47 (16768): Guest Log: -rw-r--r--. 1 atlas atlas     10968 Sep 20 01:11 runtime_log.err
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas       663 Sep 20 01:11 rNILDmA8kA6n9Rq4apOajLDm4fhM0noT9bVorHsSDmptRKDmFnJQHm.diag
2024-09-20 04:11:47 (16768): Guest Log: Looking for outputfile HITS.40994252._120494.pool.root.1
2024-09-20 04:11:47 (16768): Guest Log: HITS file was successfully produced
2024-09-20 04:11:47 (16768): Guest Log: -rw-------. 1 atlas atlas 349826747 Sep 20 01:10 /home/atlas/RunAtlas/HITS.40994252._120494.pool.root.1
2024-09-20 04:11:49 (16768): Guest Log: Successfully finished the ATLAS job!
2024-09-20 04:11:49 (16768): Guest Log: Copying the results back to the shared directory!
2024-09-20 04:11:50 (16768): Guest Log:  *** Contents of shared directory: ***
2024-09-20 04:11:50 (16768): Guest Log: total 856328
2024-09-20 04:11:50 (16768): Guest Log: -rwxrwxrwx. 1 root root 519249090 Sep 19 09:37 ATLAS.root_0
2024-09-20 04:11:50 (16768): Guest Log: -rwxrwxrwx. 1 root root 349826747 Sep 20 01:11 HITS.pool.root.1
2024-09-20 04:11:50 (16768): Guest Log: -rwxrwxrwx. 1 root root      9161 Sep 19 09:37 init_data.xml
2024-09-20 04:11:50 (16768): Guest Log: -rwxrwxrwx. 1 root root    495972 Sep 17 11:02 input.tar.gz
2024-09-20 04:11:50 (16768): Guest Log: -rwxrwxrwx. 1 root root   7270400 Sep 20 01:11 result.tar.gz
2024-09-20 04:11:50 (16768): Guest Log: -rwxrwxrwx. 1 root root     17539 Sep 17 11:02 start_atlas.sh
2024-09-20 04:11:50 (16768): Guest Log:  *** Success! Shutting down the machine. ***
2024-09-20 04:11:50 (16768): VM Completion File Detected.
2024-09-20 04:11:50 (16768): Powering off VM.
2024-09-20 04:11:51 (16768): Successfully stopped VM.
2024-09-20 04:11:51 (16768): Deregistering VM. (boinc_ca5c807855cdf04e, slot#2)
2024-09-20 04:11:51 (16768): Removing network bandwidth throttle group from VM.
2024-09-20 04:11:51 (16768): Removing VM from VirtualBox.
04:11:57 (16768): called boinc_finish(0)

</stderr_txt>
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