Posts by micropro

1) Message boards : Number crunching : My badges are not showing up (Message 46050) Posted 12 Jan 2022 by micropro Post: Thank you for the answer. Perhaps I've been impatient while I reached 10 000... anyway, thank for the link too !
2) Message boards : Number crunching : My badges are not showing up (Message 46034) Posted 10 Jan 2022 by micropro Post: Hi, I've got a similar so-called issue so I'm asking here. I've run more than 1 ATLAS task (12 since the beginning of 2022 if the stats show it properly). I'm not getting any badges for reaching 10.000 credits. (I'm not running for credits, but I like to see my work "aknowledged" when I've done it). So question is : Is it 10.000 credits of ATLAS only (and only ATLAS for the higher level badges) or is it some all-in-one badges with the condition of running at least 1 ATLAS task? Subquestion : If it's only ATLAS, is there a way to see our seperate credits per sub-projects? (sixtracks, theory etc.) Best regards, micropro
3) Questions and Answers : Unix/Linux : [Help] No CPU time? (Message 41852) Posted 8 Mar 2020 by micropro Post: Well, it seems we have to keep our config files up to date. When I see some configuration posted I tell myself some default.conf must have been altered... in the right way I mean, even if it is not recommended (but actually, if you have a backup file, it works well). I still had some messed up CPU Time but whatever... could it be my hardware by the way ? On Windows CMS keeps sending me "error computing" or similar messages... but this is for another thread I guess ;) As far as I'm concerned, my quesions were answered and problems solved. Thank you very much !! micropro
4) Questions and Answers : Unix/Linux : [Help] No CPU time? (Message 41849) Posted 8 Mar 2020 by micropro Post: Well if I remember it well, I edited this file following the advice given in the third or fourth post of this topic. Anyway, I've looked at Atlas's topics and followed the instructions given there. So, I've now a cern.ch.local with the URLs correct (I guess) : $ sudo cvmfs_config showconfig -s Running /usr/bin/cvmfs_config -s atlas: [...] CVMFS_SERVER_URL='http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch;http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch;http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch;http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch' # from /etc/cvmfs/domain.d/cern.ch.local [...] After a reload, the stat gives something unexpected (following Atlas topic recommandations) : $ sudo cvmfs_config stat Running /usr/bin/cvmfs_config stat cvmfs-config.cern.ch: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE 2.7.1.0 3571 3 28616 13 0 1 57631 6144001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/cvmfs-config.cern.ch DIRECT 1 stat atlas.cern.ch gives me : $ sudo cvmfs_config stat atlas.cern.ch atlas.cern.ch not mounted I don't remember doing anything else than what was advised in the installation instructions but when you look here and there you notice there are some slightly differences. Anyhow, after editing, wipecache, reload, probing gives me all okays. Don't know what I am supposed to do next... Thanks again for your help and patience (and reading my English... not my native language) micropro
5) Questions and Answers : Unix/Linux : [Help] No CPU time? (Message 41847) Posted 7 Mar 2020 by micropro Post: By undoing my mistakes... it failed again (back to normal I guess). Reading carefully the default.conf, it must not be edited ok... (well, we can do it so, "should not" is more suitable, just my opinon). $ cvmfs_config showconfig -s altas.cern.ch ... CVMFS_KEYS_DIR=/etc/cvmfs/keys/ # from /etc/cvmfs/default.conf ... Actually, that makes sense when I look at my other files because none of the other contain any kind of information about CVMFS_KEYS_DIR As far as cern.ch.conf is concerned I have this, is it correct ? $ cat cern.ch.conf # Don't edit here. Create /etc/cvmfs/domain.d/cern.ch.local. # As a rule of thumb, overwrite only parameters you find in here. # If you look for any other parameter, check /etc/cvmfs/default.(conf\|local) # and /etc/cvmfs/config.d/<your_repository>.(conf\|local) # # Parameter files are sourced in the following order # /etc/cvmfs/default.conf # /etc/cvmfs/default.d/* # /etc/cvmfs/default.local # /etc/cvmfs/domain.d/<your_domain>.conf # /etc/cvmfs/domain.d/<your_domain>.local # /etc/cvmfs/config.d/<your_repository>.conf # /etc/cvmfs/config.d/<your_repository>.local # # Use cvmfs_config showconfig to get the effective parameters. # CVMFS_SERVER_URL="http://s1cern-cvmfs.openhtc.io/cvmfs/@fqrn@;http://s1ral-cvmfs.openhtc.io/cvmfs/@fqrn@;http://s1bnl-cvmfs.openhtc.io/cvmfs/@fqrn@;http://s1fnal-cvmfs.openhtc.io/cvmfs/@fqrn@;http://s1unl-cvmfs.openhtc.io/cvmfs/@fqrn@;http://s1asgc-cvmfs.openhtc.io:8080/cvmfs/@fqrn@;http://s1ihep-cvmfs.openhtc.io/cvmfs/@fqrn@" # CVMFS_KEYS_DIR=/etc/cvmfs/keys/cern.ch # CVMFS_USE_GEOAPI=yes Just so you know, if I uncomment the CVMFS_KEYS_DIR of this file, that I wipecache, reload and probe (successfuly), then I have as I should : $ cvmfs_config showconfig -s altas.cern.ch ... CVMFS_KEYS_DIR=/etc/cvmfs/keys/cern.ch # from /etc/cvmfs/domain.d/cern.ch.conf ... I must admit I'm a bit lost among all this mistakes I've made (and unmade sometimes) but still I don't understand what this line was commented. I see a bit clearer in the way cvmfs_config is organised though. Even if I don't get cvmfs to work with this installation, I'm grateful for all this help ! micropro
6) Questions and Answers : Unix/Linux : [Help] No CPU time? (Message 41845) Posted 7 Mar 2020 by micropro Post: Did you install the software package "cvmfs-config-default" that includes the missing keys? Actually I checked to be sure and I did install it before all this kind of mess. Yes I runned the initial "cvmfs_config setup", I remember it well since I followed the instruction you've given in your links. After "cvmfs_config setup" I've done "$ cat /etc/auto.master.d/cvmfs.autofs" to check if the file contained /cvmfs and /etc/auto.cvmfs I've gone through default.config and default.local once again... and thank you for brining up the links actually it was of great help. In default.config, there is : CVMFS_KEYS_DIR=/etc/cvmfs/keys/ BUT what the Client Configuration Web page shows is : CVMFS_KEYS_DIR=/etc/cvmfs/keys/cern.ch and indeed it seems that a file, cern.pub, is needed. Maybe I dit a useless thing but I added this line to default.local as well. A little of cvmfs_config and it's working like a charm with cvmfs_config stat AND cvmfs_config probe I'm gonna try an ATLAS job and post it the result here. It's weird because I never touched default.conf before... only created default.local. Anyway, thanks you for your help and your patience. I'll let you know if it works well now. micropro EDIT : seems it runs the same way for ATLAS, and Theory simulation (I got one job) brings a "comping error". I'll put these problems on hold for now... really awful headache for 4 days.
7) Questions and Answers : Unix/Linux : [Help] No CPU time? (Message 41841) Posted 7 Mar 2020 by micropro Post: Hi again, something's wrong, can't see what or why so, here's what I did and the output of it. $ sudo cvmfs_config wipecache Wiping out /var/lib/cvmfs/alice.cern.ch ... OK Wiping out /var/lib/cvmfs/atlas-condb.cern.ch ... OK Wiping out /var/lib/cvmfs/atlas.cern.ch ... OK Wiping out /var/lib/cvmfs/cernvm-prod.cern.ch ... OK Wiping out /var/lib/cvmfs/grid.cern.ch ... OK Wiping out /var/lib/cvmfs/sft.cern.ch ... OK Wiping out /var/lib/cvmfs/shared ... OK Following by... $ sudo cvmfs_config probe Probing /cvmfs/atlas.cern.ch... Failed! Probing /cvmfs/atlas-condb.cern.ch... Failed! Probing /cvmfs/grid.cern.ch... Failed! Probing /cvmfs/cernvm-prod.cern.ch... ^C I stopped there as a failed was enough to investigate... $ sudo cvmfs_config showconfig -s atlas.cern.ch CVMFS_REPOSITORY_NAME=atlas.cern.ch CVMFS_BACKOFF_INIT=2 # from /etc/cvmfs/default.conf CVMFS_BACKOFF_MAX=10 # from /etc/cvmfs/default.conf CVMFS_BASE_ENV=1 # from /etc/cvmfs/default.conf CVMFS_CACHE_BASE=/var/lib/cvmfs # from /etc/cvmfs/default.conf CVMFS_CACHE_DIR=/var/lib/cvmfs/shared CVMFS_CHECK_PERMISSIONS=yes # from /etc/cvmfs/default.conf CVMFS_CLAIM_OWNERSHIP=yes # from /etc/cvmfs/default.conf CVMFS_CONFIG_REPOSITORY=cvmfs-config.cern.ch # from /etc/cvmfs/default.d/50-cern-debian.conf CVMFS_DEFAULT_DOMAIN=cern.ch # from /etc/cvmfs/default.d/50-cern-debian.conf CVMFS_HOST_RESET_AFTER=1800 # from /etc/cvmfs/default.conf CVMFS_HTTP_PROXY=DIRECT # from /etc/cvmfs/default.local CVMFS_IGNORE_SIGNATURE=no # from /etc/cvmfs/default.conf CVMFS_KEYS_DIR=/etc/cvmfs/keys # from /etc/cvmfs/default.conf CVMFS_LOW_SPEED_LIMIT=1024 # from /etc/cvmfs/default.conf CVMFS_MAX_RETRIES=1 # from /etc/cvmfs/default.conf CVMFS_MOUNT_DIR=/cvmfs # from /etc/cvmfs/default.conf CVMFS_MOUNT_RW=no # from /etc/cvmfs/default.conf CVMFS_NFILES=65536 # from /etc/cvmfs/default.conf CVMFS_NFS_SOURCE=no # from /etc/cvmfs/default.conf CVMFS_PAC_URLS=http://wpad/wpad.dat # from /etc/cvmfs/default.conf CVMFS_PROXY_RESET_AFTER=300 # from /etc/cvmfs/default.conf CVMFS_QUOTA_LIMIT=6000 # from /etc/cvmfs/default.local CVMFS_RELOAD_SOCKETS=/var/run/cvmfs # from /etc/cvmfs/default.conf CVMFS_REPOSITORIES=atlas,atlas-condb,grid,cernvm-prod,sft,alice # from /etc/cvmfs/default.local CVMFS_SEND_INFO_HEADER=yes # from /etc/cvmfs/default.local CVMFS_SERVER_URL='http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch;http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch;http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch;http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch;http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch;http://s1asgc-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch;http://s1ihep-cvmfs.openhtc.io/cvmfs/atlas.cern.ch' # from /etc/cvmfs/domain.d/cern.ch.conf CVMFS_SHARED_CACHE=yes # from /etc/cvmfs/default.conf CVMFS_STRICT_MOUNT=no # from /etc/cvmfs/default.conf CVMFS_TIMEOUT=5 # from /etc/cvmfs/default.conf CVMFS_TIMEOUT_DIRECT=10 # from /etc/cvmfs/default.conf CVMFS_USE_GEOAPI=no # from /etc/cvmfs/default.conf CVMFS_USER=cvmfs # from /etc/cvmfs/default.conf ______ $ sudo cvmfs_config chksetup Error: no public keys in /etc/cvmfs/keys Error: no public keys in /etc/cvmfs/keys Error: no public keys in /etc/cvmfs/keys Error: no public keys in /etc/cvmfs/keys Error: no public keys in /etc/cvmfs/keys Error: no public keys in /etc/cvmfs/keys Still I had to try this one... $ sudo cvmfs_config stat Running /usr/bin/cvmfs_config stat cvmfs-config.cern.ch: df: .: Software caused connection abort df: .: Transport endpoint is not connected /usr/bin/cvmfs_config: line 912: +: syntax error: operand expected (error token is "+") All probing return a 'Failed!' Would it be of any help to post the content of default.conf and default.local ? I know I must be annoying with that. I'd really appreciate some help but if tell me it's not worth it I could understand. micropro
8) Questions and Answers : Unix/Linux : [Help] No CPU time? (Message 41838) Posted 7 Mar 2020 by micropro Post: Here it goes... Probing /cvmfs/atlas.cern.ch... OK Probing /cvmfs/atlas-condb.cern.ch... OK Probing /cvmfs/grid.cern.ch... OK Probing /cvmfs/cernvm-prod.cern.ch... Failed! Probing /cvmfs/sft.cern.ch... OK Probing /cvmfs/alice.cern.ch... OK How can I check I've done everything right ? Because I'm certain 100% that I followed every step advised. Any help would be welcome. micropro
9) Questions and Answers : Unix/Linux : [Help] No CPU time? (Message 41835) Posted 6 Mar 2020 by micropro Post: Thank you very much ! I'll try that as soon as I can. Didn't know singularity should be avoided. micropro
10) Questions and Answers : Unix/Linux : [Help] No CPU time? (Message 41831) Posted 6 Mar 2020 by micropro Post: Thanks for your advice! I've updated the default.local file and installed what I though necessary about squashfs. However, I don't know what you mean by "Atlas-Folder"... I haven't figured out where the log files are... yet. I've checked Yeti's Checklist, which seems much more helpfull for people running on Windows but if I understood it well, there's not definitive explanation concerning this issue. Am I missing something about what he's saying ? It seems that, depending on the job, the CPU time taken into account varies a lot. I started a new ATLAS job to test after squashfs... all good. Resuming my first ATLAS job... rather bad at first, then it began to consider the CPU time. I won't say it's random, because there must be a reasonable explanation for that, but without knowing it... it's disturbing. Anyway, I'll keep an eye on the numbers and probably edit my post at the end of the job. Best regards, micropro
11) Questions and Answers : Unix/Linux : [Help] No CPU time? (Message 41828) Posted 6 Mar 2020 by micropro Post: Hi all, I'm running under Linux debian 4.19.0-8-amd64 #1 SMP Debian 4.19.98-1 (2020-01-26) x86_64 GNU/Linux ... ... and I've been trying to make ATLAS native work, desperately. I've done my best to install cvmfs and singularity and it seems okay. I followed the instructions given at cvmfs.readthedocs.io and some similar website for singularity. Basically, a ATLAS job is running, percentage is going up, but when I look at the properties of this job via BOINC it doesn't show any CPU time elapsed. Moreover, the system monitor of Debian doesn't show any kind of CPU activities although I've set BOINC to use 2 CPUs and the amount of RAM used stay low. Please, could you enlighten me on what's going on? I really don't want to use Windows for BOINC as I'm under Linux for programming from now (mainly Oz language). I started a SixTrack (avx) job earlier and it showed CPU time on the properties. I am, of course, willing to give any logs necessary to fix this, willing to use another distro too for BOINC. Best regards, micropro

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